New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3428910 =	10 (0.120)	11 (0.140)	9/168	NT	53.8%	intergenic (‑148/‑326)	rrsD/yrdA	16S ribosomal RNA of rrnD operon/bacterial transferase hexapeptide domain protein
	?	NC_000913	= 4207974	NA (NA)					intergenic (‑442/‑173)	purH/rrsE	IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase/16S ribosomal RNA of rrnE operon

ACTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGA  >  NC_000913/4207885‑4208073                                                                                          |                                                                                                    aCTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgc                                                                                           >  2:1581516/1‑100 (MQ=11)  cTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgcg                                                                                          >  2:132992/1‑100 (MQ=31)   ttCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTgcgc                                                                                         <  1:2218413/100‑1 (MQ=32)    tCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCt                                                                                        >  2:1446735/1‑100 (MQ=33)      acacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTaa                                                                                      <  2:24688/100‑1 (MQ=35)       cacgAAGAGCCGGTTCGGTTGAAGAGAAAAATCGTGAAGGTGAGTGGTGGCGCTGAAAGAGAAAAGGGTAATATACGCCACCTCGCGACAGTGCGCTaaa                                                                                     >  2:1220068/1‑100 (MQ=11)       cacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTaaa                                                                                     >  2:2003933/1‑100 (MQ=38)       cacaAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTaaa                                                                                     >  2:47776/1‑100 (MQ=38)        acaAACATCCGGTTCGGTTGAAGATAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAg                                                                                    <  1:45950/100‑1 (MQ=255)         caAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgc                                                                                   >  2:1484099/1‑100 (MQ=38)         caAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgc                                                                                   >  2:1878971/1‑100 (MQ=40)         caAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgc                                                                                   <  2:397032/100‑1 (MQ=40)          aaaCAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgcg                                                                                  <  2:1030756/100‑1 (MQ=40)           aaCAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAgcgc                                                                                 >  1:1255156/1‑100 (MQ=40)            aCAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGcgcg                                                                                <  1:2221035/100‑1 (MQ=255)              aGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTc                                                                              <  1:475461/100‑1 (MQ=255)              aGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTc                                                                              <  1:739432/100‑1 (MQ=255)                ccGGTTCGGTTGAAGAGAAAAATTCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCg                                                                             <  1:1051930/99‑1 (MQ=255)                ccGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGc                                                                            <  2:1287358/100‑1 (MQ=255)                 cggttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCa                                                                           >  1:633652/1‑100 (MQ=255)                  ggttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCaa                                                                          >  1:67905/1‑100 (MQ=255)                   gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                         <  1:1455261/100‑1 (MQ=255)                   gttcggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAAc                                                                         <  1:55399/100‑1 (MQ=255)                      cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                      <  1:389344/100‑1 (MQ=255)                      cggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAACATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGc                                                                      >  2:1432580/1‑100 (MQ=255)                       ggttGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGct                                                                     >  2:577346/1‑100 (MQ=255)                          tGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCtt                                                                  <  2:1430919/100‑1 (MQ=255)                           gAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCttt                                                                 <  2:415442/100‑1 (MQ=255)                            aaGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTa                                                                <  1:747696/100‑1 (MQ=255)                             agagAAAACTCCTGAAATTCAGGGTGGACTCTGAAAGAGGAAATCGTAATATACGCCACCTCGCGATAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                               >  2:1535979/1‑100 (MQ=14)                             agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGTTAAAGCGCGTCGCAACTGCTCTTTaa                                                               <  1:1364926/100‑1 (MQ=255)                             agagAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTaa                                                               >  2:2161982/1‑100 (MQ=255)                              gataaagaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATGCGGCGCCTCGCGACAGTGCGCTACAGCGCGTCGCAACTGCTCTTTAAc                                                              <  2:1975187/97‑1 (MQ=14)                              gagaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAAc                                                              <  1:1343570/100‑1 (MQ=255)                                gaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACaa                                                            >  2:1940060/1‑100 (MQ=255)                                gaAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACaa                                                            >  1:479847/1‑100 (MQ=255)                                  aaaaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGAGCTAAAGCGCGTCGCAACTGCTCTTTAACaa                                                            >  2:720661/1‑98 (MQ=38)                                    aaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTa                                                        <  2:545518/100‑1 (MQ=255)                                    aaTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTa                                                        <  1:1473893/100‑1 (MQ=255)                                     aTCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTAt                                                       >  1:1233861/1‑100 (MQ=255)                                       ccTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCa                                                     <  1:936153/100‑1 (MQ=255)                                        cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  2:483569/1‑100 (MQ=255)                                        cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    <  2:1192065/100‑1 (MQ=255)                                        cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    <  1:120045/100‑1 (MQ=255)                                        cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    <  1:497449/100‑1 (MQ=255)                                        cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    <  1:663696/100‑1 (MQ=255)                                        cTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAg                                                    >  1:1855548/1‑100 (MQ=255)                                          gAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGAc                                                  <  2:1082859/100‑1 (MQ=255)                                             aTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAAt                                               >  1:1964732/1‑100 (MQ=255)                                             aTTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAAt                                               <  1:782612/100‑1 (MQ=255)                                              ttCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACACTTTATCAGACAATc                                              >  2:2212173/1‑100 (MQ=255)                                                cAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtg                                            <  2:2244247/100‑1 (MQ=255)                                                    gTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgtg                                        <  1:1375571/100‑1 (MQ=255)                                                    gTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgtg                                        <  2:1767613/100‑1 (MQ=255)                                                    gTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgtg                                        <  2:602607/100‑1 (MQ=255)                                                      tGACTGTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg                                      <  1:2035815/100‑1 (MQ=255)                                                      tGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCtgtgtg                                        <  1:344600/98‑1 (MQ=255)                                                      tGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTggg                                      <  1:1968524/100‑1 (MQ=255)                                                       gACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGc                                     >  2:1840887/1‑100 (MQ=255)                                                         ctctGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCa                                    >  1:755507/1‑99 (MQ=255)                                                            tGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCg                                >  1:149161/1‑100 (MQ=255)                                                             gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGa                               <  2:1569538/100‑1 (MQ=255)                                                             gAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGa                               >  2:1848864/1‑100 (MQ=255)                                                               aaGAGGAAAGCGTAATATACGCCACCGCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAg                             <  2:1058162/100‑1 (MQ=255)                                                                agagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                            <  1:1689749/100‑1 (MQ=255)                                                                agagGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                            <  2:813472/100‑1 (MQ=255)                                                                  agGAAAGCTTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGa                            <  1:1728043/98‑1 (MQ=255)                                                                   ggAACGCGTAATATACGTTACCTCGCGACAATGGGCTAAAGCGCGTCGCAACTGCTCTGGAACAATTTTGCAGACAAGCTGGGGTGGCATTCGAAGATAc                         >  2:1534627/1‑100 (MQ=9)                                                                   ggAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATAc                         >  1:2113305/1‑100 (MQ=255)                                                                    gAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACg                        <  1:1641901/100‑1 (MQ=255)                                                                     aaaGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACgg                       <  1:770525/100‑1 (MQ=255)                                                                       aGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGAt                     <  2:472613/100‑1 (MQ=255)                                                                          gTAATATACGCCACCTCGCTACTGTTCGCTAAAGTGCGTCGCAACTTCTCTTTAACAATTTATCAGACATTCTGTGTGGGAACTCGAAGATACGGa                      <  2:1982678/96‑1 (MQ=14)                                                                           tAATATACGCCACCCCGCGCTAGTACGATAAAGCGCGGCGCGACTGCTCTTTAACAATTTTTCCGATAATCTGTGTTGCTATTTGAAGATACGGATACt                  <  2:325622/99‑1 (MQ=9)                                                                            aaTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                <  1:1369184/100‑1 (MQ=255)                                                                            aaTATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTa                >  2:402621/1‑100 (MQ=255)                                                                            aaTATACGCCAACTCGCGACAATGCGCTAAAGAGCGTCGCAACTGCTATTTACAAATTTATAAGAGAATCTGGGAGGGCACTCGAAGATACGGATGCt                  >  2:1988340/1‑98 (MQ=14)                                                                             atatACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTaa               <  2:1122451/100‑1 (MQ=255)                                                                             atatACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTaa               <  1:905591/100‑1 (MQ=255)                                                                             atatACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTaa               >  2:422895/1‑100 (MQ=255)                                                                              tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc              <  1:367623/100‑1 (MQ=255)                                                                              tataCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAAc              <  1:1349850/100‑1 (MQ=255)                                                                                taCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGt            >  1:1664380/1‑100 (MQ=255)                                                                                 aCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGt            <  2:102690/99‑1 (MQ=255)                                                                                 aCGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTc           >  2:78632/1‑100 (MQ=255)                                                                                  cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATGCGGATTCTTAACGTCg          >  2:1308801/1‑100 (MQ=255)                                                                                  cGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCg          >  2:906252/1‑100 (MQ=255)                                                                                   gCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGc         >  1:914311/1‑100 (MQ=255)                                                                                    ccACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCa        >  2:729020/1‑100 (MQ=255)                                                                                      aCCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTAGCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAg      <  1:917177/100‑1 (MQ=255)                                                                                        cTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc    >  1:2228522/1‑100 (MQ=255)                                                                                        cTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc    <  2:727727/100‑1 (MQ=255)                                                                                        cTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGAc    >  1:337467/1‑100 (MQ=255)                                                                                          cgcgACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGa  >  1:2060919/1‑100 (MQ=255)                                                                                          |                                                                                                    ACTTCACACAAACAGCCGGTTCGGTTGAAGAGAAAAATCCTGAAATTCAGGGTTGACTCTGAAAGAGGAAAGCGTAATATACGCCACCTCGCGACAGTGCGCTAAAGCGCGTCGCAACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGA  >  NC_000913/4207885‑4208073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.