Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,7200CG21.5% 193.4 / 24.2 157E614Q (GAA→CAA) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base C (78/39);  new base G (26/6);  total (110/47)
Fisher's exact test for biased strand distribution p-value = 1.32e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 167 total aligned reads displayed.

TTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGG  >  DH1/2169572‑2169869
                                                                                                                                                     |                                                                                                                                                       
ttGGGTCGGGCAATAGGTTCTTCGACGGCGTCTTTGCGCTTATCGACCTGTTGTTCTTTCTGCTCTTTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttct                                                                                                                                                        <  8:74105/150‑1 (MQ=11)
 gggCTCGGGCAATAGCCGCTTCGCCGGCGGCTCTGCGCTGATCCAGGTTGGGCTGGGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttcttc                                                                                                                                                      <  3:297168/150‑1 (MQ=14)
      ggtgCAATAGCCGCGTCTAATGCCGCTTTGCGCGGATCTTCTTGTTGTTCTGGATCGTCATTAGCCTGTTGCTGTTCCAGCTTTCG‑TGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑gg                                                                                                                                                  <  4:434145/146‑1 (MQ=14)
               gCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCCGCTTTGCGGGGATCGGCCTGTGGTTCT‑GGTTCCTG‑ATTat                                                                                                                                      >  3:2019718/1‑150 (MQ=11)
                   cTTCGACGGCGGCTTTGCGAGGATCGACATCTTGTTCTGGGTCGGCATTAGCCTGTTGCTGTTCCAGCTTTAG‑AGCTTAGTCACGGGCAATAGCTGCTTCGACGGCTGATTTACGAGGATCAACAACTTATTCT‑GCTTCCTA‑ATTatgctt                                                                                                                                  >  8:218195/1‑146 (MQ=2)
                     tCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑GGCTTTGGCCCGGGCGATAGCGGCTTCGACGGCGGGTTTGCGGGGATCGAGCTGTGCTGCG‑GGGTCCGctgtaggcggtt                                                                                                                                 >  5:1860897/1‑140 (MQ=11)
                     cccccggccgcgaggcgcgcAGCGACCTCTTCCGCTCGCACCGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCTCGTGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGtt                                                                                                                                <  1:1044983/137‑1 (MQ=11)
                     acccccgcggcTTGGCGCGGATCGACATTTTGTTCTGGCTGACGAGGAGCCTGTAGCTGTTGCTGCTTGAG‑TGCTTTGCAAAGGTCAATTGCTGCTTGGACGGCGGCTTTGCTCGGATCGACCTGTTGTTCT‑GGTTCCGC‑ATTAGCCTGtt                                                                                                                                <  7:1436023/145‑1 (MQ=2)
                      cgaggtcctcgatGCGGGGATCAACCTGTTGTTCTCGCTGGGCATTCGCCTGAGCCTTGTGCAG‑TTCCGCTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCTGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGtt                                                                                                                                <  1:1154819/138‑1 (MQ=9)
                         cggcggCTTTGCGCGGATCGACCTGTTGTTCTGGATCCGCATTAGCCTGTTACATATCAAGATAGAC‑TTCTTTGGAAAGGGAAAAATCGCCTTAGTAGAACGCTTTGCTCGGATATACATTTAATAAT‑TGTTCCGC‑ATTAGCCTGTTgg                                                                                                                              >  8:1435260/1‑148 (MQ=2)
                             ggcTTTGCGCGGATCGACCTGTTGTTCTGGGTCGGCATTAGCCTTTTTCTGTTCCGGATTGCT‑TTGTTTTGCACGGGCAAGAGAGGCTTCGCCGGCGGCTGTGCGCGGTTAGACATGTTGTTCT‑GGTTCCGG‑ATTAGCGTggggcggtggc                                                                                                                        >  3:975043/1‑141 (MQ=2)
                             ggcTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTCTGCTTCT‑GGTTCCGC‑AGTAGCCTGTTGCTGTTcc                                                                                                                        >  8:1141455/1‑151 (MQ=255)
                             ggcTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑AGCTTTGGCGCGGGCGATAGCTGATAGGCCCGCAGCTGTCCGCTGATCGCCAGGTACCTCT‑GCTTCGGG‑AGTAGCCGGTTgtgtttgc                                                                                                                        >  7:514677/1‑144 (MQ=2)
                              gcTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑AGCTTTGGCGCGGGCAATATCATCTTAAACGCCTCCTTTGCGCAAATAGAGATTTTGTAGT‑TGTACCTC‑ATTATCCTGTTGCTGttaa                                                                                                                        >  8:230274/1‑148 (MQ=2)
                                 ttGCGAGGATCGCCCTGGTCTTCTGGGGAGTCTTGAGCGTGTGCGTGGTCCAGCTTGCG‑GGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGc                                                                                                                     <  7:174734/150‑1 (MQ=11)
                                    cgcgtatttttctcttgttCTGGCTCCGCACGAGCCTGTCCCTGGTCAAGATTGCG‑TTCTCTTCCACGCGGATCAGCCGCTTTCACTGCCGCTTTGCGCGGATCTACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTgc                                                                                                                 <  6:331578/137‑1 (MQ=2)
                                       ggATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGGGGATCGCCCAGTTGTTCT‑GCTTCGGG‑ATTTGCCTGTTGCTCTTCCAGATTgcgcg                                                                                                              >  1:585544/1‑151 (MQ=11)
                                        gATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTgcgcgg                                                                                                             >  1:687800/1‑150 (MQ=40)
                                        gATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCCACGGCGGATTTGCGAGGATCGACCTCTTATTCT‑GCTTCCGC‑ATTTTCCTGTTGATCTTCCAGATTtcgagc                                                                                                             >  8:1814253/1‑151 (MQ=14)
                                              ccTGGTGCTCTGGCGCGGCATTCGCCTGTGGCTGGTCCAGCGTGCG‑GGGTTTGGCAGGTGCAATAGCCGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGc                                                                                                       <  7:1826969/151‑1 (MQ=11)
                                                    gttCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCGGATCGACATGTTCTTCT‑GGTTCGGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGTCAAGGGc                                                                                                 >  4:668092/1‑151 (MQ=255)
                                                     ttCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTAGATCGGATCGGCGTCTTCTTGT‑GGTTGAGA‑ATGATCCTCTTTCTGTTGCAGCTTGCGCGCAGTGGCACgaga                                                                                                 >  2:702603/1‑147 (MQ=14)
                                                        tGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGGTTTGCGGGGATCGGCCTGGTGTTCT‑GGTTCCGG‑ATTTGAGTGTTGATGTTCCCGCTTGCGAGCTGTGGCCCGGGCTAtt                                                                                             >  3:558324/1‑150 (MQ=11)
                                                         ggCTCCGCATTAGCCTGTTGCTCTTCGAGCTTGCG‑TGCTATGCCCGGGGAATTTGCGGCTGCGACGGGCGCTTTCCTCGTATCAACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATa                                                                                             <  3:663843/150‑1 (MQ=14)
                                                          ccaccgCATTAGCCGGTTGCTGTTCCTTTTTTAT‑TGCTTGGGCTCGGGCAATCTTCTCTTCGTGGGATGCTTTGCTTTGATTCACCGTTTCTTTT‑GCGTTCTC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGc                                                                                           <  4:375301/146‑1 (MQ=2)
                                                           caccgCATTAGCCTGTTTCTGTTCCAGGTTGCG‑TGCTTTGGCTCGTGCAATAGCGGCTTCGACCGCCTCTTTGCGCGGCTCGAGCTTCTGTTCT‑GGTACCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCg                                                                                          <  4:521121/147‑1 (MQ=11)
                                                             ccgCATGAGCCGGGGGCTGTGCCAGCTTGCG‑GGCGTCGGCACGGGCAAGCGCGGCTGCGACGGGGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCg                                                                                          <  7:409686/147‑1 (MQ=11)
                                                             cGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGATTTGCGCGGATCGACCTCTGATTCT‑GGTTCCGC‑ATTAGCCTGTTGATCTTCCAGCTTGCGAGATTTTTCACGGTGAATATCGGc                                                                                        >  4:2019160/1‑151 (MQ=11)
                                                              cgcccgcgCCGGTGGCTGGGCCCGCTTGCG‑TGCTTTGGCTCGTGCAATAGCCGCTTCGCCGGCTGCTTTGCGCGGAGCGCACTGGTCTTCT‑GGGGCCGC‑AGTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCt                                                                                       <  5:1629727/144‑1 (MQ=2)
                                                               gcattattgtttttcTGTTCCTGCTTGCT‑TGCTTTGGCTCTTGGTATATCAGATTCTTCGGCTTCTTTTCGCGGATCGTAGTTTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCtt                                                                                      <  8:846581/137‑1 (MQ=9)
                                                                cATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGCCGGCCGCTTTCCGCGGATCGACCTCTTCTGCT‑GCTTCCGC‑ATTAGCCTGATGCTCTTCCAGCTTGCGCCCTTAGGCCCGGGCAATCGCTGCATc                                                                                     >  8:420131/1‑151 (MQ=11)
                                                                cATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGCGGATCGCCCTGGTGTTCT‑GGTTCCGC‑ATTTTCCTGTTGCTGTTCCAGCTTGCGCGCGTTGGCCCGGGCAATAGcttcttg                                                                                     >  7:893925/1‑145 (MQ=11)
                                                                      ccTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGGGGATCGACATGTTGTTCT‑GGTTCCGG‑ATTTGCCTGTTGCTGTTGCAGCTTGCTGGCTTTGGCACGGGCGCTAGCGGCTTCGCcggg                                                                               >  3:2005362/1‑150 (MQ=11)
                                                                       cTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGCCCTGTGGTTCT‑GCTTCCGG‑ATTATCCTGTTGGTGTTCGAGCTTGCGCGCTGTGGCCGGGGCTATAGGGGCTTCGCcggct                                                                              >  5:1090837/1‑150 (MQ=11)
                                                                         tttgatgttgcttcTTGCG‑TGATTTTGAACGGGCAATAGAGTCTTTGACTCCTGGTTTGTGTTGAGAGATCTGTTCTTCT‑GGCTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGAcggcgg                                                                             <  8:1358306/137‑1 (MQ=9)
                                                                           tGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCAGCTTTGCGAGGATCCGCAAGTTGTTCT‑GCTTCCGG‑AGTATCCTGTTCGAGATCCAGCTTGAGCTCTATGGCACGGGAGATATCGGCTTCGTcggacgcgt                                                                          >  2:28112/1‑145 (MQ=2)
                                                                            gCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTACGC‑AATAGCCTGTTGCTGTTCCCCCTTGCGCGGTTTGGCACGGGCAATAGCGGCTTCGCCGGCGGGttg                                                                         >  5:603722/1‑150 (MQ=14)
                                                                                   cAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTGTTCT‑GGTTCCGC‑AGTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCTATAGCGGCTTCTCCGGCGGTTTTACGCggt                                                                  >  5:1640603/1‑150 (MQ=11)
                                                                                     gCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCT‑GGTTCCGG‑ATTAGCCTGTTGGTGTTCCAGCTTGCGCGCTTAGGCCAGGCCCATAGCGGCTTCTACGGCGCCTTTTAGTGGATc                                                                >  7:980562/1‑151 (MQ=11)
                                                                                      cTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTGTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCTGCTTCTACGGCGGGTTTTCGAGGATct                                                               >  1:1310223/1‑150 (MQ=11)
                                                                                           g‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGGGGATCGCCATGTTGTTAT‑GGTTCCGC‑ATTAGCGTGTTGCTGGTCGAGCATGCGAGCTTTGGCTCTGGCGATAGCTGCTTCAAATCAAGATTTGCGGGGATCGGCCtg                                                          >  1:497573/1‑151 (MQ=2)
                                                                                           atttcTTTTGCGCGGTCAATAGAGTCTTCGACGGCCGATTAGAGCCTATCGAACTCTTCTGCT‑‑CTTCCGCTATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGAcc                                                            <  2:390374/146‑1 (MQ=2)
                                                                                               cccgggCCCGGGCCCTAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGCTCCGC‑AGTAGCCTGTTGCTGTTCCCGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                       <  7:1120986/147‑1 (MQ=11)
                                                                                               cTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCTACGGCCGGATTGCGAGGATCAAccggggg                                                       >  5:624912/1‑146 (MQ=14)
                                                                                                 gcggCACGCGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCTACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTTGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                     <  8:100974/149‑1 (MQ=14)
                                                                                                  gggCTCGGGCAATAGCCGCGGCCACGGCCGCTTTGCGCGGATCGAGCTGGTCATCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCGAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTGCGACGGCGGCTTTGCGCGGATCGACCTgttgtt                                                     <  7:1071774/149‑1 (MQ=14)
                                                                                                   ggccggtgCAATAGCCGCTGCGCCGGCTGCGCTGCGCGTCTCGTGCTGATGTGCG‑GGCTCCGG‑ATTTGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCTCGGATCGACCTGTTGTTCt                                                   <  1:1684720/144‑1 (MQ=2)
                                                                                                     cACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGCCCTGTTGTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCTGCTTCACCGGCGGATTTCCGCGGATCGCCCTCGTGTGCTgg                                                 >  3:1714887/1‑151 (MQ=11)
                                                                                                       cGGGCAATAGCGTCTTCTACTGCGGCTTTGAGAGGATTTACCTGGTCGTCTCTCTTCCG‑‑ATCTTCCTGGTGCTGTTCGTGTTTTTGGGCTTGTGCTCGGGCAATAGCGGCTTCTACTGCGGCTTTGCGCGGATCGACCTGTTCTTCTGGtt                                               <  6:1826028/151‑1 (MQ=2)
                                                                                                        gggCAATCTCTGTTTCGACCGCGGATTTTCTCGGATCGACCTGTTCTTCT‑GGCTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTc                                              <  4:324388/151‑1 (MQ=11)
                                                                                                        gggCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGATTTGGCCCGGGCAATAGCTGCTACTACGGCAGATTTGCGAGGATCGACCTGGGGTGCTGCTTc                                              >  2:648863/1‑151 (MQ=11)
                                                                                                        gggCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACATGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGAAATAGCTTCTTCTACTGCAGTTTTTCGAGGATCATCCTGGGGTTCTGGGTc                                              >  6:766548/1‑151 (MQ=11)
                                                                                                           cAATAGCGGCTTCGACGGCGGCTTTNCGCGGATCGACCTGTTGTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTNTGGCACGGGCAATANCTGCTTCGACGGCGGNTTTGCGCGGATCCTCATCTGGTTCTGGGTCCgg                                           >  5:487538/1‑150 (MQ=11)
                                                                                                            aaTAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCAGGTTTTCGGGGATCCGCCTCGGGTTCTGCTTcgtg                                           >  5:900739/1‑147 (MQ=11)
                                                                                                             aTAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGTTCTTCT‑GGGTCCGC‑ATTAGCCTGTTGCTGTTCCAGCtt                                                                                                                   >  3:1129406/1‑77 (MQ=11)
                                                                                                               aGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCAACGGCAGGTTTTCGAGGATCATCCTGGTGTTCTgcgtccttatt                                        >  4:1933324/1‑140 (MQ=11)
                                                                                                               aGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTCTTGTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTCCGAGCTTTGGCACGGGCAATAGCTGCTTCAACGGCGGATTTACGGGGATCAACATCGTGTTCTGCTTcctgatt                                        >  6:996665/1‑145 (MQ=1)
                                                                                                                   gCTTCCCCGCCGGCTTTGCGCGGATCGACCTGTTTTTCT‑GGATCCGC‑ATTAGCCTGTTTCTTTTACAGCTTTCGAGATTTTTCACGTGCAATAGGGGCTTCGTAGGTGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCt                                   <  4:974185/151‑1 (MQ=11)
                                                                                                                    cTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGGGGATCTCGCTGGAGGTCTCGTGTCGCATTAGcagc                                  >  7:303812/1‑148 (MQ=14)
                                                                                                                     ttCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTACGAGGATCGCCCAGTTGTGCTGGTTCCGAATTAGCCTgg                                 >  8:621476/1‑150 (MQ=14)
                                                                                                                     ttCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGATTTACGAGGATCGACAACTTGTTCTGGTTCCTAATTAGCCTGt                                 >  4:1655013/1‑151 (MQ=14)
                                                                                                                      tCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCTGCTTCGACGGCAGTTTTACGTGGATCCGCCTCGTGTTCTGCTTCGGGATTatgctgat                                >  2:1222184/1‑144 (MQ=11)
                                                                                                                        gACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGAGGATCGCCCTGTTGTTCTGGTTCCGCATTTGCCTGATgt                              >  7:1973559/1‑150 (MQ=255)
                                                                                                                             cggcTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCTATAGCTGCTTCGACGGCGGCTTTCCGGGGATCGCCATGTTGTTCTGCTTCCGGAGTTTCCTGTTGGTGTTc                         >  3:1289244/1‑151 (MQ=14)
                                                                                                                             cggcTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCGGATCGCCATGTTGTTCTGGTTCCGGATTATCCTGTTGTTGTTc                         >  1:928832/1‑151 (MQ=14)
                                                                                                                                cTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTACGCGGATCAACCTCGTGTTCTGCGTCCGCATTAGCCTgaagatcttcc                        >  6:653097/1‑139 (MQ=14)
                                                                                                                                  ttGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCTGCTTCGACGGCCGATTTGCGCGGATCGCCCACTTGTGCTGGTTCCGCATTATCCTGATGTTGTTcctgat                    >  7:631260/1‑147 (MQ=14)
                                                                                                                                  ttGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGCGGATCGCCCTCTTGTTCTGGTTCCGGAGTTGCCTGTTGATGTGcctgat                    >  8:1310212/1‑147 (MQ=14)
                                                                                                                                  ttGCGCGGATCAACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCt                                                                                                            <  1:1364999/63‑1 (MQ=21)
                                                                                                                                   tGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGAGGATCGGCCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGGtt                   >  6:1405516/1‑151 (MQ=255)
                                                                                                                                     cgcgGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGAGGATCGCCCTGTTGTTCTGGTTCCTCATTATCCTGTTGCTGTTAGAGCATgc                 >  5:81868/1‑151 (MQ=14)
                                                                                                                                     cgcgGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCAACGGCGGGTTTGCGAGGATCTACCTGTTTTTCTGCTTCCTCATTAGCCTGATGCTCTGCCAGAttcc                 >  8:1777323/1‑149 (MQ=14)
                                                                                                                                      gcgGATCGAGCTGTTGATCT‑GGGACCGC‑ATCAGCCGCGAGCTGGTCCCGGTTGCGGGGTTTCGCAGGGGCATTAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGGTCCGCATTAGCCTGTTGCTGTTCCAGCTTgcg                <  7:1799771/151‑1 (MQ=2)
                                                                                                                                       cgGATCAACCTGTTCTTCT‑GGTACCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCACGGGCAATAGCAGCTACGAAGACCGAGTTGAACGGATCGACATGATTGTCAGGTTAAGCAGTAGCGGGTAGCGGTTACAgttagaa                >  2:1719269/1‑144 (MQ=2)
                                                                                                                                         gATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCGGCTTCGACGGCGGATTTGCGGGGATCCACCACGGGTGCTGCGTCCGGATTTGCCTGATGCTCTTcctacttccgagc             >  4:527804/1‑140 (MQ=14)
                                                                                                                                         gATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTCTTGTTCTGGTTCCGCATTAGCCTGTAGATCTTCCAGCTTgcgagc             >  8:766311/1‑151 (MQ=255)
                                                                                                                                          aTCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGCGGATCGCCATCTGGTTCTGGTTCCGGATTAGCCTGTTGATGTTCCAGCTTGCGCGCt            >  3:530829/1‑151 (MQ=14)
                                                                                                                                          aTCGACCTCTTCTGCT‑GGGTCCGC‑AGTTGAGTGGTGCTGTGCCCGGTTGTGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGGTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCt            <  1:641336/151‑1 (MQ=11)
                                                                                                                                           tCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGGGGATCGCCCTGTGGTTCTGGTTCCGCATTATCCTGTTGCTGTTCCAGCTTccgaggtt           >  1:1604599/1‑146 (MQ=14)
                                                                                                                                           tCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTATCCTGTTGCTGTTCCAGCTTGCGCGAtt           >  7:1589159/1‑151 (MQ=255)
                                                                                                                                            cGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGGTTTCCGGGGATCGCCCTCTGGTTCTGGTTCCTGATTATCCTGTTGGTGTTCCAGCTTGCGAGAttt          >  2:1784433/1‑151 (MQ=14)
                                                                                                                                            cGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATATCGGCTTCGACGGCGGCTTTGCTCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCtt           <  6:1611147/150‑1 (MQ=255)
                                                                                                                                            cGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTCCGCGCttt          >  7:782051/1‑151 (MQ=255)
                                                                                                                                             gACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCAACGGCGGGTTTGCGGGGATCGCCAAGTTGTTCTGGTTCCTGATTATCCTGTTGCTCTTCCAGCTTGCGAGAtttt         >  1:1288687/1‑150 (MQ=14)
                                                                                                                                             gACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCGGCTTCGACGGCGGGTTTGCGCGGATCGCCATGTTGTGCTGGTTCCGGAGTATCCTGTTGTTGTTCCAGATTGCGCGCtgtt         >  3:1092779/1‑148 (MQ=14)
                                                                                                                                             gACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGCTTTGCGCGGATCGACAACTTGTTCTGGTTCCGCAGTATCCTGATGATCTTCCAGATTccgacattat         >  6:1274448/1‑144 (MQ=14)
                                                                                                                                             gACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGGTTTGCGCGGATCGCCCTGTTGTTCTGGTTCCGCATTAGCCTGATGATGTTCCAGCTTCCGCGCtttt         >  3:896984/1‑150 (MQ=255)
                                                                                                                                              aCCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAg                                                                                                                      <  1:1896467/41‑1 (MQ=35)
                                                                                                                                              aCCTGTTCTTCT‑GGTACCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGTGCAATAAAGAGATAGACGTAGGCTATGCGCGGATAAACCTGTTGTTATGTCTCTGGATTAGCATGTATATTTTCAAGGTTGCGGGCTTTgg        >  6:240/1‑151 (MQ=2)
                                                                                                                                               ccTGTTCTTCT‑GGTACCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCCGCTTTGCGCGGATGAACCTGTTCTTAGCGGTCGGCATTAGAGTGATCCGGATCTAGATTGCGTGCCTTggg       >  3:722603/1‑150 (MQ=14)
                                                                                                                                                cTGTTCTTCT‑GGCTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCgg                                                                                         <  1:1244638/68‑1 (MQ=255)
                                                                                                                                                 tGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCGATAGCGGCTTCGACGGCGGCTTTGCGGGGATCGCCCACTGGTTCTGCGTCCGGATTTTCCTGATGATGTTCCAGATTGCCCGCtgggtcgc     >  3:1465557/1‑144 (MQ=14)
                                                                                                                                                 tGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCAACGGCGGGTTTGCGAGGATCGCCCACTTTTTCTGGGTCCGAAGTATCCTGTTGGTGTTCCAGATTccgggattagtggg     >  4:1906872/1‑140 (MQ=14)
                                                                                                                                                 tGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCTCATTAGCCTGTTGCTGTTCCAGCTTCCGCGCTTAGgcgc     >  5:950167/1‑151 (MQ=255)
                                                                                                                                                 tGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGgcgc     >  7:1468212/1‑151 (MQ=255)
                                                                                                                                                  gTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGGCGATAGCTGCTTCGACGGCGGGTTTGCGGGGATCGCCCTCGTGTTCTGGTTCCGCATTATCCTGATGGTGTGCCAGCTTCCGCCATTTGGcgcg    >  3:1110120/1‑151 (MQ=14)
                                                                                                                                                   ttcttcT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGCGGATCGCCCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTCTGCCAGCTTCCGCGATTTGgcgccg   >  5:1494916/1‑149 (MQ=14)
                                                                                                                                                    tcttct‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCCCGGGCAATAGCTGCTTCGACGGCGGGTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGATTGCGCGCTTTGGCGCggg  >  7:146253/1‑151 (MQ=255)
                                                                                                                                                    tcttct‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCTGCTTCGACGGCGGGTTTGCGCGGATCCACCACTTGTTCTGGTTCCTCATTATCCTGTAGGTCTTCCAGCTTccgagagttgtcccgtg  >  2:1433411/1‑137 (MQ=14)
                                                                                                                                                     cttct‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCCACGGCGGCTTTGCGCGGATCGACCTCTTGTTCTGCTTCCGAATTATCCTGTTGCTGATCCAGATTCCGAGCTTTGGCCCggg  >  2:1390706/1‑150 (MQ=14)
                                                                                                                                                     |                                                                                                                                                       
TTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCG‑TGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTCTTCT‑GGTTCCGC‑ATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCGCGGG  >  DH1/2169572‑2169869

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑