| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | DH1 | 936,278 | 1 | . | T | 25.3% | 211.8 / 120.4 | 91 | intergenic (‑12/+22) | ECDH1_RS04620/ECDH1_RS04625 | tRNA‑Met/tRNA‑Met |
| Reads supporting (aligned to +/- strand): ref base . (57/11); new base T (22/1); total (79/12) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.96e-02 | |||||||||||
TCACCGTACTGCTTTTACTTCATCAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTT > DH1/936157‑936427 | tCACCGTACTGCTTTTACTTCATCAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCCGTAGTGC‑TTTAATACAGCAAATTTTAATTGGTTgac > 8:907989/1‑149 (MQ=18) gcgtgaaaattctttGGTGGCGGGGGCCGGATTTGACCGCACGCCCTTCGGGATATGAGCCCGACGAGCTACCAGTCTGCTCCACCCCCCGTCACCGTACTGC‑TTTTCTTGATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACcg < 3:367297/137‑1 (MQ=11) tcatcaataaTTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTg < 6:373226/118‑1 (MQ=255) tctttAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTtc < 3:546230/103‑1 (MQ=18) tcaatcaTTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTtcat < 3:1910295/101‑1 (MQ=9) tcaTTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCaaa < 5:912563/105‑1 (MQ=21) taaTTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTAATCaaa > 6:910753/3‑107 (MQ=17) aCCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑ATTACTTCATCAAATTATAATTCGTTGAGGGGGCAGTATTTGAACAGACGACCTTCGGGTTATGAGCCAGACGACCTACCAgac > 8:135237/1‑149 (MQ=11) gacCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCAGCCAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCGACCAGCCTGCTcc > 3:718395/1‑151 (MQ=255) aTGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACAGTACTGC‑GTTACTTCATCAATGTATATTTGGTTGCGGGGTGGGGATTTGCCCAGACGACATTCGGGTTATTATACCGACGAGCTAAAACGCTGCTCCaaaaagagtc > 8:482554/1‑140 (MQ=2) cccgaGCTACCATTCTTCTCCACCCCGCGGCACCGTCCTGA‑TTTCCATCAGGAAATTTAGTTTTGACGCGGGGTCTTGATATCAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑Tgcg < 7:875354/149‑1 (MQ=9) cTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCGGGATTTGAACCGACGACCTTCGGGTTATGAGACCGCCGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACtat > 7:822146/1‑151 (MQ=255) tACCAGGCTGCTCCACCCCGCGTCAGGGGACTGC‑GTGAATTCTGCAATGTTTAATTGGTTGCGGGGGGCTGATTTGAACCGACGCCATTCGGGTTATGATCCCGCAGAGCTACAAGGCTGCTCCACCCATCGTCCGTTGA‑TGCTCCCtatc > 3:406198/1‑150 (MQ=9) ccAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCtt < 4:2205167/87‑1 (MQ=255) ccAGGCTGCTCCACCCCGCGTCACCGTAATGC‑TTTACTTCATCAAAATTTAATTGGTTGAGCGGGCCGTATTTGAACCGACCCCCTTAGGGTTATTAGACCAACTAGATAACAGGATGCTCCACAACTCTTCCGAGTA‑TGGGCACTATACt > 1:1624229/1‑151 (MQ=9) cAGGCTGCTCCACCCCGCGTCACCGGACGGC‑GTTTCTTCATCAAATTTTAATTGCTTGCGGCGGCGGGATTTGAACCGACGCCCTTCGGCTTATGAGACCCACGAGCTACCAGGCTCCTGCCCCCCGCGTCCGTGCA‑AGCGCACTATACTc > 3:1707402/1‑151 (MQ=17) aGGCTGCTCCACCCCGCGTCACCGTAGTGC‑GTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGCCGCCCTTCGGGTTATGATCCCGCAGAGCTACCAGGCTGCTCCCCCACGCGTCCGTGGA‑TGCGCACTATACTcc > 7:609709/1‑151 (MQ=18) aGGCTGCTCCACCCCGCGTCACCGGACGGC‑TTTACTTCATCAAAGTTTTATTGGTTGCGGGGGGAGGATTTGAAGCGACGACCTTGGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCAACCCTCGTCGGTGGA‑TGCTCACTATACTcc > 4:695207/1‑151 (MQ=14) ctgctCCACCCCGCGTCACCGTAGTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGAAGGATTTGAACCGCCGACCTTCGGGTTATGAGCCCGACGAGGTACAAGGATGCTCCACCCCGCGTCAGTGTA‑TGAGCACTATACTCCGcg > 4:1209196/1‑150 (MQ=17) tgctCCACCCCGCGTCCCCGTACTGC‑TTTACTTCATCAATTTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGGCCGCCGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTc > 1:1807355/1‑151 (MQ=255) tgctCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCCCTATACTCCGCTc > 7:922710/1‑151 (MQ=255) tgctCAACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTc > 1:330441/1‑151 (MQ=255) agctccccGCGTCACCGTACTGC‑TTTACATCAAGAAAATTTTATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTcgcg < 5:1535/147‑1 (MQ=18) ccACCCCGCGTCACCGTAGTGC‑TTTACTTCATCAAATTTTTTTTGGTTGAGGGGGCCTGATTTGAACCGAAGACCTTCGGGTTATGAGACAGACGAGCTACCAGGCTGCTCCCCAGCTCGTCCGTGGA‑TGCGCACTATACTCCGGTCGGGt > 1:1638112/1‑151 (MQ=17) ccACCCCGCGTCACCGTACTGG‑GTTACTTCAACAAATTTTAATTCGTTGCGCCGGCCGGATTAGAACCGCCGACCTTCGGGTTATGAGACCACCGATCGACCAGCCTGCTCCACCCAGCGTCCGAGGA‑TGCGCACTATACTCCCGTCGCGt > 8:2075360/1‑151 (MQ=17) ccACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGt > 7:1969848/1‑151 (MQ=255) ccACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGt > 3:676767/1‑151 (MQ=255) ccACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGt > 3:724793/1‑151 (MQ=255) cACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGtt > 1:632172/1‑151 (MQ=255) aCCCCGCGTCACCCTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCGGAGGAGATACAAGCATGCTCAACCCCCCGACGGTGGA‑TCCCCCCTATAAACCCCTCGCtttt > 2:291927/1‑151 (MQ=14) ccccGCGTCACCGTACTGCTTTTAATTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGCGTTATGAGCCCGACGAGATACCAGGCTGCTCAACCCCGCGTCAGTGGA‑GGCGCACAATACTCCTCTcgcgacat > 6:1533/1‑147 (MQ=11) cccGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCCGACTATTCTGCGCTAGGGTTTTc > 4:1957326/1‑151 (MQ=11) cccGCGTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGAGTA‑TGCCAAGTATAcaacgatgtagaattg > 6:2103849/1‑136 (MQ=11) cccGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTc > 3:902898/1‑151 (MQ=255) gctgTCACCGTACTGCTTTTACTTCTTAAAATTTT‑ATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCAt < 2:1495094/148‑1 (MQ=17) cgcgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGACCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCAt > 7:1506839/1‑151 (MQ=255) gcgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGCGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATg > 1:1597055/1‑151 (MQ=255) cgTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCCCACTATACTCCGCTGGCGTTTTCAttc > 4:1305020/1‑149 (MQ=14) cgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGc > 4:1289992/1‑151 (MQ=255) cgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGc > 5:1214962/1‑151 (MQ=255) cgTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGc > 2:609752/1‑151 (MQ=255) gTCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGA‑TGCGGACTATACTCCGCTGGAGTTTTCAt > 1:1498744/1‑148 (MQ=11) gTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGc > 6:422435/1‑150 (MQ=255) gTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGc > 4:1471373/1‑150 (MQ=255) gTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGc > 6:158657/1‑150 (MQ=255) tCACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGGACTATACTCCGCTCGCGTTTTCATGCac > 5:1284408/1‑150 (MQ=14) tCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGACCCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCCCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCa > 6:1321972/1‑150 (MQ=255) tCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCa > 8:1376456/1‑150 (MQ=255) tCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCa > 1:2021626/1‑150 (MQ=255) tCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCa > 7:364541/1‑150 (MQ=255) tCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCa > 3:1397541/1‑150 (MQ=255) cACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGA‑TGCGGACTATACACCCCACGCGTTTTCATGGAAc > 7:432122/1‑151 (MQ=11) cACCGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCAGTGGA‑TTCGCAGAATACTCCTCTTTCTTATTCATGGAAc > 1:443799/1‑151 (MQ=11) cACCGTACTGC‑TTTTCTTTCACAAATTTTAATTGGTTGCGGGGGCCGGAttt < 6:1499760/52‑1 (MQ=14) cACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAAc > 1:1795301/1‑151 (MQ=255) cACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAAc > 6:527600/1‑151 (MQ=255) cACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAAc > 7:1566277/1‑151 (MQ=255) aCCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAAcc > 6:1568467/1‑151 (MQ=255) ccGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGA‑GGCCCACTATACTCCGATCTGTTTTTCATGGAAccg > 7:2112010/1‑150 (MQ=11) ccGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCt > 7:1710018/1‑151 (MQ=255) ccGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGCGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCCTTTTCATGCAACCt > 8:1967899/1‑151 (MQ=255) cGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGTTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCCGGGA‑TGCGCACTATACTACCCTCTAGTTTTCATTCAcccgt > 2:351555/1‑149 (MQ=11) cGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtt > 1:1331495/1‑151 (MQ=255) cGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑AGCGCAGAATACTCCGATAGCGTATTCATGGAAccgt > 6:760261/1‑149 (MQ=11) cGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGAGTATTGCG‑ACTATACTACACTCTATATTTGATTCAACCtt > 4:728475/1‑151 (MQ=14) cGTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGAGGA‑AGCGCAATATACTGCGCTAGAGTTTTCATGCAACCtt > 8:313765/1‑151 (MQ=11) gTACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑GTCGGAGTATACTCCACTCTATTTTTCAttgacgcttt > 3:1102183/1‑142 (MQ=11) gTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttt > 1:1692366/1‑151 (MQ=255) gTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTAATGCAACCttt > 7:59323/1‑151 (MQ=255) tACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt > 3:1479629/1‑151 (MQ=255) tACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACAATACACCGCTGGAGTTTTCATGCACCCttat > 6:2059731/1‑149 (MQ=14) tACTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGCGGA‑GTCGCAGTATACTCCGCACTAGTTTTccttcagccgtgt > 7:2137902/1‑139 (MQ=11) tACTGC‑TTTACTTCTTCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt > 8:1194397/1‑151 (MQ=255) tACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTGATGCAACCtttt > 6:1052745/1‑151 (MQ=255) tACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt > 5:992405/1‑151 (MQ=255) tACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt > 7:1859531/1‑151 (MQ=255) tACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt > 1:488492/1‑151 (MQ=255) tACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt > 4:136388/1‑151 (MQ=255) tACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt > 4:97115/1‑151 (MQ=255) tACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt > 8:1992695/1‑151 (MQ=255) cacggC‑TGTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGAGTTGAACCGACGACCTTCGTGTTATGAGCCCGACGAGCCACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttt < 3:1212353/147‑1 (MQ=255) aCTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTCTGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCTCTATACTCCGCTCGCGTTTTCATTCAAccgtgtt > 3:1770223/1‑146 (MQ=14) aCTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGA‑TTCGGAGTATACTGCGATCGGTTTTTGATTGAACCttagg > 7:1235987/1‑148 (MQ=11) aCTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGA‑TGGCCACTCTACTCCCCTCGAGTTTTCCTGccccctgtat > 7:328264/1‑142 (MQ=11) aCTGCTTTTACTTCATCAAA‑TTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGGGGA‑TGCGGAATATACTCCGCTCGCGTTTTCATTCAACCttttt > 1:321051/1‑151 (MQ=14) aCTGC‑TTTTATTTAATAAAATTTCATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtt < 8:1233394/148‑1 (MQ=18) aCTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttttt > 5:1824080/1‑151 (MQ=255) cTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttt > 7:1030945/1‑151 (MQ=255) tGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGCCGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCACCCttttttt > 4:629481/1‑151 (MQ=255) tGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttttttt > 1:850314/1‑151 (MQ=255) tGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCttttttt > 2:151105/1‑151 (MQ=255) c‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCtttttttt > 7:1942363/1‑150 (MQ=255) | TCACCGTACTGCTTTTACTTCATCAAATTTGATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCACCGTACTGC‑TTTACTTCATCAAATTTTAATTGGTTGCGGGGGCCGGATTTGAACCGACGACCTTCGGGTTATGAGCCCGACGAGCTACCAGGCTGCTCCACCCCGCGTCCGTGGA‑TGCGCACTATACTCCGCTCGCGTTTTCATGCAACCTTTTTTTT > DH1/936157‑936427 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |