Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*DH12,169,5480GT28.6% 280.3 / 44.5 156P671Q (CCG→CAG) rsxCelectron transporter RsxC
Reads supporting (aligned to +/- strand):  ref base G (15/95);  new base T (4/40);  total (21/135)
Fisher's exact test for biased strand distribution p-value = 5.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 158 total aligned reads displayed.

GCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGC  >  DH1/2169401‑2169696
                                                                                                                                                    |                                                                                                                                                    
gCAAGTGCCGCTTTGCGCGGATCAACCTGCTCTTCTGGTACCGCATTAGCCTGTTGCTGTGCCCGCTTGCGTGCCTTGGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGtt                                                                                                                                                   <  8:847435/151‑1 (MQ=38)
gCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCGAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGtt                                                                                                                                                   <  2:1327316/151‑1 (MQ=255)
gCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGtt                                                                                                                                                   <  8:1049005/151‑1 (MQ=255)
 cAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTg                                                                                                                                                  <  6:72345/151‑1 (MQ=255)
  aaCTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTTCCGCATTAGCCTATATCTGTTCACCGTAGAGTACTTAAACACTTGGAATATAAGATTAGAAGTCGGGTTTGCGCGGATCAATATAATATTCTGGG‑TCCGCATTAGCCgggggg                                                                                                                                                 >  2:1267095/1‑147 (MQ=2)
  aaCTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGc                                                                                                                                                 <  4:730919/151‑1 (MQ=255)
      gCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGtt                                                                                                                                             <  2:145554/151‑1 (MQ=255)
      gCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTACTTATCAAGATAGAGTGCTTTGGCAAGTGCAATAACAGATTAGAAGACAGCTTTGCGCGGATAAACCTTTTATTATGGA‑TCCGCATTAGCCGGTTGGTggt                                                                                                                                             >  8:1295831/1‑149 (MQ=12)
         gCTTTGCGCGGATCAACGTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTccc                                                                                                                                          <  5:1225340/151‑1 (MQ=255)
           gttGCGCGGATCAACCTGGTCTTCTGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGt                                                                                                                                        <  3:987102/150‑1 (MQ=255)
            ttGCGCGGATCAACCTGGTCTTCTGGTACCTCATTAGCCTGTTGCTGTTCCAGCTTGCTTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCATCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGGATTAGCCGGTTGCTGTTCCCg                                                                                                                                         <  1:1381988/149‑1 (MQ=255)
              gcgcTGATCAACCTGGTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTg                                                                                                                                     <  6:32632/151‑1 (MQ=255)
              gcgcGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCTGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTg                                                                                                                                     <  2:688981/151‑1 (MQ=255)
               cgcgGATCAAGCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTgc                                                                                                                                    <  2:1330329/151‑1 (MQ=255)
               cgcgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGATTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGC‑TCCGCCTTAGCCGGTTGGTGGTCCCGTCTgc                                                                                                                                    >  3:1220072/1‑151 (MQ=17)
                gcgGATCAACCTGTTCTTCGGGTACCGGATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTgcg                                                                                                                                   <  2:1131704/151‑1 (MQ=255)
                 gggATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTgcgc                                                                                                                                  <  6:1373953/150‑1 (MQ=255)
                 cgGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGAGCTTTGGCGCGTGCAATAACATCTTAAACGCCTCCTTTACGCAAATCGACATATTCTTATTGT‑TGCTCATTATCctgttcctgttcaatattaaa                                                                                                                                   >  4:727660/1‑141 (MQ=2)
                      cAACCTCGTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCtt                                                                                                                              <  6:104453/150‑1 (MQ=255)
                           tGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCAGTTCTTCAGGA‑ACCGACATAGCCCGTAGCTTATCCAGTAAGCCCGCTTTGGCTc                                                                                                                        >  5:3556/1‑151 (MQ=17)
                            gTTCTTCTTGTACCGCATTAGCCTGTTGCTGTTCGAGCTTGAGTGCGTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                        <  8:1236214/150‑1 (MQ=255)
                            gTTCTTCTGGTTCCGGATTATCCTGTTGCTGTTCGAGCTTGTTTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCg                                                                                                                       <  8:867258/151‑1 (MQ=37)
                            gTTCTTCTGGTACCGCTTTAGCCTGGTGCTGTTCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                        <  4:1288189/150‑1 (MQ=255)
                            gTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTc                                                                                                                        <  5:826455/150‑1 (MQ=255)
                               cttctGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCGACTTGGCGAGCAGACACCTCTT‑AACAGCCGTCAGCATTATCCGGTTCCTGTTCCCGATTgagcggtatctaacgggc                                                                                                                    >  7:806698/1‑138 (MQ=9)
                                 tctgcgaCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCa                                                                                                                   <  1:46517/144‑1 (MQ=255)
                                 tctGGTACCGCATTAGCCTGTTGCTGGTCGTGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCggg                                                                                                                     <  8:517383/148‑1 (MQ=255)
                                 tctGGTACCGCATTAGCCTGGTGCTGTTCCAGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCggg                                                                                                                     <  3:1364805/148‑1 (MQ=255)
                                    ggTTCCGCATTATCCTGTTGCTGTTCCAGGTTGCGTGCTTTTGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                 <  6:582113/149‑1 (MQ=255)
                                    ggTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAAt                                                                                                                 <  7:25784/149‑1 (MQ=255)
                                    ggTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCATGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATa                                                                                                                <  2:1168718/150‑1 (MQ=255)
                                     gTACCGCTTTACCCTGTTGCTGGGCGAGCTTTCGGGCTTGCGCGCGGGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                              <  4:1284900/151‑1 (MQ=18)
                                     gTACCGCATTAGCCTGTTGCTGGTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGc                                                                                                              <  5:266543/151‑1 (MQ=255)
                                       aCCGCAATAGCCTGTTGCTGGTCCCGCTTGCGGGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCgg                                                                                                            <  2:628190/151‑1 (MQ=255)
                                         cGCATGAGCCTGGTGCTGTTCCAGCTTGCGTGCGTTCGCGCGGGCAATAGCCGCTTCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                          <  7:148003/151‑1 (MQ=25)
                                          gCATTAGCCTGGTGCTGTTCCAGCTTGCGGGCGTTGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCtt                                                                                                         <  5:1425562/151‑1 (MQ=255)
                                           cATTATCCTGTTGCTGTTCCTGCTTTCTTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCt                                                                                                          <  8:679933/149‑1 (MQ=255)
                                            aTTAGCCTGTTGCTGTTCCAGCTTGAGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCg                                                                                                       <  4:1241105/151‑1 (MQ=255)
                                              tAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGAGCTTCTGGC‑TCCCCAATAGCCGGTTGATGTTCCAGTTTGCGAGCTTTGTCTAGGGAAATAGCGGCTTCgcg                                                                                                     >  7:511167/1‑149 (MQ=14)
                                              caGCCTGCTGCTGGTCGAGCTTGCGTGCTTGCGCGCGTGCAATAGCCGCTGCGACGGCAGCTTTGCGCGGATCAACCTGTGCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAc                                                                                                     <  8:271642/150‑1 (MQ=17)
                                                gCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCGACCTGATCTACTCGC‑ACCGCAGTAGCCCGGTGCTGTGACCGGATTCCAGCTGTGGAGCGGGCAAGAGCGGCTTCGAagg                                                                                                   >  1:264137/1‑151 (MQ=9)
                                                 ccTGTTGCTGTTCGAGCTTGCGTGCTTTTGCGCGTGCAATAGCCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                  <  2:282893/151‑1 (MQ=255)
                                                 ccTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTGTTCTGGC‑TCCGGATTAGCCTGTTGCTGTTCCAGTTTGCGCGCTTTGGGGCGGGCGATACCCGCTTCTAccgc                                                                                                  >  7:1112890/1‑151 (MQ=11)
                                                 ccTGTTGCTGTTCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACTGCAGCTTGGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggc                                                                                                  <  1:1072971/151‑1 (MQ=255)
                                                    gTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGAcggcgg                                                                                                <  1:1217453/150‑1 (MQ=255)
                                                      tGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCTACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCt                                                                                              <  6:517544/150‑1 (MQ=255)
                                                       gCTGTTCCCGCTTGCGTGCCTTCGCGCGTGCAATAGCCGCGTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                            <  6:224533/151‑1 (MQ=255)
                                                       gCTGTTCCAGGTTGCGGGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                            <  7:306329/151‑1 (MQ=255)
                                                       gCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCGGCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCtt                                                                                             <  2:827798/150‑1 (MQ=255)
                                                       gCTGTGCCAGCTTGCGTGCGTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCttt                                                                                            <  3:168965/151‑1 (MQ=255)
                                                          gTTCCAGCTTTCTTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTgcg                                                                                         <  2:1194652/151‑1 (MQ=255)
                                                             ccAGGTTGCTTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTCGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCgg                                                                                      <  8:1221328/151‑1 (MQ=255)
                                                                gCTTGTTTGCTTTGGCGCGTTCAATAGCCGCTTCGACTGCAGCTTTGCGCTGATCAACCTGTTCTTCTGGC‑TCCGGATTAGCCGGTTGCTGTTCCCGTTTGCGGGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATc                                                                                   <  8:1101318/151‑1 (MQ=17)
                                                                gCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCCACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGGTTGGGGCggcgg                                                                                   >  5:674944/1‑148 (MQ=17)
                                                                  ttgcttgcctgtgcgcGGGCAATAGCCGCTGCTACGGCCGCTTTGCGCGGATCAACCTGTTCTTATTGC‑TCCGCATTAGCCGGTTGCTGTTCGCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg                                                                                  <  6:755467/138‑1 (MQ=14)
                                                                   tgctggcgttcgcgcGGGCAATAGCCGCGGCCACTGCAGCTGTGCGCGGAGCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCg                                                                                  <  6:89182/138‑1 (MQ=14)
                                                                   tGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCCGCATTGCAAGCATCTACCTGTTCTTATGTC‑TCAGAATTATACTGTTGCTGTTCCAGGTTGCGCGATTTGTAAAAAGAAATAGCGGCTTCGACGGCGGGttggggaggggggcg                                                                                >  4:1419786/1‑138 (MQ=255)
                                                                     cgggcctgggCGCGGGCAATAGCCGCGGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCt                                                                              <  3:1316242/143‑1 (MQ=17)
                                                                         gttttGCGCGGGCAATAGACTCTGCTACTGCAGCTGTTCGGGGATCTAAGTGTTCTTCTGGT‑TCGGGATTAGCCTGGTGCTGTTCGCGTTTTCGGGCTTTTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                          <  6:1139107/150‑1 (MQ=2)
                                                                         gtttGGCGCGGGCAATAGCCGCTTCGACGGCAGCTTTGCGCTGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCtgttg                                                                          <  8:1037319/150‑1 (MQ=255)
                                                                             ggCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGGTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGGTCCCGTTTGCGCGCTTGGGCGCGGGCAATAGCGGCTTAGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCt                                                                      <  1:1008358/151‑1 (MQ=255)
                                                                             ccctctggcacgaGCCCCTTCGCCGGCCGCTTTGCGCGGATCTACCTGTTGTTCTGGT‑TCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGttcttc                                                                       <  4:1223997/138‑1 (MQ=11)
                                                                               cgctggCAAGAGCCGCTGCGACGGCAGCTGTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCTGGTGCTGGTCGCGTTTGCTCGCGTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg                                                                    <  1:834825/146‑1 (MQ=14)
                                                                               cgcgGGCAATAGCCGCTTCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCTGTTGCTGTTCCAGCTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTgg                                                                    <  1:1181755/151‑1 (MQ=255)
                                                                                 ggTGCAATAGCCGCGGCTACTGCCGCTTTGCGCTGATCAACCTGTTCTTCTGGC‑TCCGCTTTAGCCTGTTGCTGTTCCCGTTTGCGGGCTTTTGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt                                                                  <  6:1111695/150‑1 (MQ=14)
                                                                                 cgTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGATCGGGCAATAGCGGGTTCGACGGCGGCTGTGCCCCGAGCGACGCGTTGGTCTGGCt                                                                  >  5:601989/1‑151 (MQ=21)
                                                                                 cgTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGGTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCGTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt                                                                  <  1:597597/151‑1 (MQ=255)
                                                                                 cgTGCAATAGCCGCGGCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCt                                                                  <  1:773228/151‑1 (MQ=14)
                                                                                  ggggaagaGCCGCTGCTACTGGAGCTTTGCGAGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCTGCTGCTGTTCCCGTTTGTGCGCTTTCGCTCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTc                                                                 <  6:951939/144‑1 (MQ=14)
                                                                                   ggCAATAGCCGCGGCGACTGCAGCTTTGCGCTGAGCAACCTGGTCTTCTGGC‑TCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTCGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                <  1:915058/150‑1 (MQ=14)
                                                                                    gCAATAGGCGCTTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCg                                                                <  6:401445/150‑1 (MQ=255)
                                                                                    gCAATAGCCGCGTCTACTGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg                                                               <  2:1093579/151‑1 (MQ=255)
                                                                                    gCAAGAGCCGCTTCAACTGCAGCTTTCCGCTGATCAACCTGGTCTTCTGGC‑TCCGCATTAGCCTGCTGCTGTTCCCGTTTGCTCGCGTTGGCGCGGGCAATAGCGGCTTCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCgg                                                               <  6:1432187/151‑1 (MQ=14)
                                                                                        tAGCCGCTTCGACGGCAGCTTTGCGAGGATCAACCTGGTGTTCTGGA‑TCCGCATTAGGCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCACGGGCAATAGCGGCTTCGCCGGCGGCGGTGGGCGGAGCGCCCGGGTGTTGTGGcggggcggg                                                           >  3:342965/1‑143 (MQ=14)
                                                                                         cgCCGCTGCCACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCTGTTGCTGGTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                          <  3:334507/150‑1 (MQ=255)
                                                                                         aGCCGCTGCTACTGCAGCTTTGCGCGGATCACCCTGTTCTTCTGGC‑TCCGCATTAGCCTGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTa                                                          <  8:402974/151‑1 (MQ=17)
                                                                                               cgcgccGGCCGCCTTGCGCGGATCTTTTTTTTCTTGTTCC‑TCCGCATTCGGAGTTTTCTTTTACTGTTATCTCGCTTTGGCTAGTGGAATAGCTTCCGAGATGGCTGCTTTGCGCGGATCGACCTGTTGTTCTGGTTCCGCATTAGCCTGt                                                    <  6:191147/146‑1 (MQ=2)
                                                                                                gccgagctagcggtGCGCGGATCAACCTGTTCTTCTTGC‑TCCGCATTCGCCGGTTGCTGTTCCGGTTGGCGGGACTTGCCTCGCGCAATAGGGGCTTCGCATGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGtt                                                   <  7:1257649/138‑1 (MQ=14)
                                                                                                gcGACTGCAGCGTTGCGCGGAGCAACCTGGTCTTCTGGC‑TCCGGTTTAGCCTGGTGCTGTTCCCGTTTGCGGGCGTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGtt                                                   <  3:546680/150‑1 (MQ=14)
                                                                                                gcGACGGCAGCTTTGCGCGGAGCATCCGGTGCTTCTCGG‑TCAGCAGTAGCCGGTTGCTCTGCCCGTTTGCGCGCTTTGGCGCGGGCAATAGCGGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGtt                                                   <  7:1081443/150‑1 (MQ=14)
                                                                                                 ggtcGGCCGCTTTGGGGTGATCAACCCGTTCTTCTGGC‑TCCGCATTAGCCTGTTGCTGGTCCCGTTTGGGCGCTTGTGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTg                                                  <  7:752361/148‑1 (MQ=14)
                                                                                                   aCGTCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCTGTTGCTGTTCCCGTTTGCTCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCt                                                <  3:1078308/151‑1 (MQ=255)
                                                                                                        cgCTGTGCGCGGAGGAACCTCTTCTTCTGCC‑TCGTCATAAGCCTGGTGCTGGGCGCGTTTGCTCGCCTTGGCGCGGGCAATAGCCGCGTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTcc                                           <  7:1464628/150‑1 (MQ=9)
                                                                                                        aGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTAGATATCAAGTTAGACCTCTTTGGATAGGGGAATAACGGGTTAGAAGGAGTCTTTGCGCGGATAGACCTTTTGTTCTGGCTCGGCATTAGCCTGttagatcggg                                           >  8:1258068/1‑143 (MQ=16)
                                                                                                         gCTTAGCGCCGAGCCCCCTCTTCCGCTCGC‑TCGGCATTAGCCTGTTGCTGTTCTATCTTTCGTGCTTTGGCACGTGCAATAGAGTCTTCTAAGGCGGCTTTGCGCTGATCTAGCTGTTCTTCTGTTTCCGCATTAGCCTGTTGCTGTTCCa                                          <  8:827026/151‑1 (MQ=2)
                                                                                                              tcgaggaggcaCCTGGTGTTCTTGC‑TCCGGATTAGCCTGGTGCTGTGCCGGTTTTGTGGCGTTGGCTCGGGCAATAGCCGCTTCGACTGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCtt                                      <  1:1278947/140‑1 (MQ=14)
                                                                                                              gcgcGGAGCTACCAGGTCTTCTGGC‑TCCGCATGAGCCTGGTGCTGGTCGGGTTTGCGGGCGTTGGCGCGGGCAATAGCCGCGGCGACTGCCGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTg                                     <  3:1382868/151‑1 (MQ=11)
                                                                                                                gcgGAGCCACCTGTGCTTCTGGG‑AGCGCATTAGCCTGGTGCTGTTCGCGTTTTCGGGCGTTCGCGCGGGCAATAGCCGCTTCCACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCg                                   <  7:256701/151‑1 (MQ=11)
                                                                                                                 gttttctaattggtcttctGGC‑TCCGCATTAGCCTGTTGCTGTTCGGGTTTTCGGGCTTTTGCGCGGGCAATAGCCGCTGCGACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                  <  4:255093/138‑1 (MQ=11)
                                                                                                                 cgGAGCTACCTGTTCTTCTGGC‑TCGGGATTAGCCTGTTGCTGTTCGCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGt                                  <  4:490078/151‑1 (MQ=14)
                                                                                                                      cAACGTGTTCTTCTTCC‑TCCGCATGAGCCTGCTGCTGTTCCGGTTTTGTGGCTTTGGCGCGGGCAATAGCGGCTGCTACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCtt                              <  3:549783/150‑1 (MQ=14)
                                                                                                                       aaCCTGTTCTTCTGGC‑TCCGCAGTAGCCGGTTGCTGTTCCCGTTTGCGAGCTTTGGCTCGGGCAATAGCGGCTTCGACGGAGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGTCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTg                            <  4:487392/151‑1 (MQ=255)
                                                                                                                        accagcagttcgGGC‑TCCGCATCAGCCTGGTGCTGGTCCCGTTTGCGGGCGTTGGCGCGGGCAATAGCCGCTGCCACGGCGGCTTTGCGCGGATCCACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTgg                           <  3:1055260/143‑1 (MQ=14)
                                                                                                                        aCCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGGTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGTTc                                                                 >  1:95175/1‑113 (MQ=255)
                                                                                                                         ccTGTTCTTCTGGT‑TCCGCATTATCCGGTTGCTGTTGCTGTTCGGTTGGTTGCGCGCGGGCAATAGCGGCGTCTACTGCGGCTTTGCGCGGATCTACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGc                          <  8:307500/151‑1 (MQ=14)
                                                                                                                                   gggC‑TCGGCATGACCCTGGTGCTGGTCCCGTTTGCGGGCGTTCGCTCGGGCAATAGCCGCGTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATa                <  5:434326/150‑1 (MQ=14)
                                                                                                                                     cc‑TCCGCATTAGCCGGGTGCTGGTCCGGTTTGCGCGCGTGCGCGCGGGCAATAGCGGCGGCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGc              <  5:567676/150‑1 (MQ=14)
                                                                                                                                           gCATCACCCGGGTGCTGTTCCCCTTTGCGCGCGTTGGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCtt         <  1:1340100/151‑1 (MQ=17)
                                                                                                                                             atcaGCCGGGTGCTGGGCCCGTTTGCGCGCGTGCGCGCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCg       <  7:309586/148‑1 (MQ=17)
                                                                                                                                                attcGGTTCCTGTTCGCGTTTTTGGGCTTTCGCTCGGGCAATAGCCGCGTCTACTGCCGCTTTGCGCGGATCTACCTGTTCTTCTGGATCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGAc     <  4:192034/147‑1 (MQ=14)
                                                                                                                                                    |                                                                                                                                                    
GCAACTGCCGCTTTGCGCGGATCAACCTGTTCTTCTGGTACCGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCGCGTGCAATAGCCGCTTCGACGGCAGCTTTGCGCGGATCAACCTGTTCTTCTGGC‑TCCGCATTAGCCGGTTGCTGTTCCCGTTTGCGCGCTTTGGCTCGGGCAATAGCGGCTTCGACGGCGGCTTTGCGCGGATCGACCTGTTGTTCTGGCTCGGCATTAGCCTGTTGCTGTTCCAGCTTGCGTGCTTTGGCACGGGCAATAGCGGCTTCGACGGC  >  DH1/2169401‑2169696

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑