| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,708,862 | 0 | C | A | 24.2% | 212.7 / 19.4 | 185 | V648V (GTC→GTA) | rsxC | SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex |
| Reads supporting (aligned to +/- strand): ref base C (83/36); new base A (37/1); total (141/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.51e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 191 total aligned reads displayed.
CAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAA > NC_000913/1708712‑1709011 | cattgcgatctatcTGGAAGACCAACAGGATAATCCGGACGCAGAAACCGTGGCGGATCCCCGCAAACCCGCCGTCGAAGCAGCTATTGCCCGGGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTc < 3:1753604/138‑1 (MQ=9)aaaaGCGCGGAATCTGGAACACCATCAGCAAAATTCGGAAGCAGAACCAGTTGGCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTc < 3:1438118/150‑1 (MQ=11) aaGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATCCGCGCAAAGCCGCAGTCGCAGCGGCTATTGCCCGGGCCAAAGCCAGAAAGCGCGAACAGCACCAGGCTATAGACGAGCCAGAACACCACGTcccacgccca > 3:831382/1‑141 (MQ=11) ggAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAgc‑c < 1:1535562/151‑1 (MQ=40) cacctacagcatactGCCGACCCAGAAACAGAGGCTGATCCTCGCAAACCCGCCGTCGAAGCAGCTATCGCCCGCGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGc‑cgccg < 7:1143155/137‑1 (MQ=11) cAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTCACCGAGCCAAACAACGCACGAAGGAAGTGCAAGATCCTAATGGCGACTCAGTACAACAGGTCGATCAGACCAAAGC‑CGCCGTCg > 7:1266762/1‑151 (MQ=9) aaCAGGCTTATGCGGAACCAGAACAAATTGTCGATCAGCGTAACCCATCAGGAGTATCTTCTATTGTCCGTGCCAAAGCTCGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCg < 6:504784/150‑1 (MQ=2) cAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCAGTAGAAGCCGCTATTGCCCGAGCGAACGCAAGAAAGCTGGCACAGCACCAGGCTAATGCCGAGCCAGAACACCACGTCGATCCGCGCACAGC‑AGACGTCgcac > 5:1793401/1‑148 (MQ=14) tGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTGGAGGCGCGCGCAGC‑CGGCGTCGCAGCCgggcgt > 3:427953/1‑146 (MQ=11) aaCCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCg < 3:1352608/151‑1 (MQ=40) ccAGAAGAACAGGTCGATCCGCGCAAAGCGGCCGTCGAAGCCGCTATTGCCCGCGCGAACGCACGCAACCTGGACCAGCACCAGGCTAATGCGGATCCAGACCACGAGGGGGATCCGCGCACCGC‑TGCCGTCGACGCCGGTATTgaacgcg > 7:1508309/1‑145 (MQ=2) cAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTAGAAGCCGCTATTGCCCGTGCCAAAGCACGCAACCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAACTC‑GGCAGAAGAAGCGGCGATTCCCCgcgc > 5:1176292/1‑151 (MQ=14) agaagaACAGGTCGATCCGCGCAAAGCCGCCGTGGAAGCCGCTATTGCCCGTGCGAAAGCAAGCAAGCTGGAACAGCAACAGGCTAATGCCGAGGCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGCAGCGGCTATTGCCCGCGcc > 3:705061/1‑151 (MQ=14) cagcccAGGTCGAGCCCCGCAAACCAGCCGTTGTAGCTTCTATGGCCCGGGCCAAATACGGCAAGATGGCAGCGGAACAGCGTAAAGACGTGCCAGAACACCAGGTGGATCCTCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCaa < 3:168575/146‑1 (MQ=9) gaaCAGGTCGATCCGCGCAAAGCCGCCGTAGACGCCGCTATTGCCCGAGACAAAAACCGCAACCTGGAACAGAAAAAGGCTAATGCCGTTCAAGAAGAACAGGTTGATCCGCGCAAAGC‑AACAGTAGACGCCGCTAGTGCCCGAGctaggc > 2:1697912/1‑146 (MQ=2) caggcagagccGCGCAACACCGCCGTCGAAGCAGCTATCGCCCGCGCCAAAGCTCGCAAGCTGGAACAGCAACAGGATACTGCCGACCCAGAACAACAGGGCGATCCGCGCAAACC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAgcgc < 7:922444/142‑1 (MQ=11) cAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGCTCGATCCGCGCAAAGC‑AGCCGTCCAAGCCGCTATTGACCGAGCCAAAgccc > 6:727022/1‑149 (MQ=255) ggTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑GGCAGTAGCAGCGGCTATTGCACgcgctcacgccat > 8:693106/1‑141 (MQ=11) tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTTGATCCGCGCAAAGC‑GGCAGTAGCCGCGGCTATTGCCCgcgcgcagggcggggc > 5:24371/1‑139 (MQ=11) tCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCGAAGGCCCGCa > 3:916950/1‑150 (MQ=255) gcgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGTGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCAGTCGAAGCCGCTATTGCACGAGCTAATGCAAGAAAACGGGa > 5:1339335/1‑150 (MQ=14) cccccacgccgccgccgccGCCCCTATCCCCCGCGCCAAAGCCCGCAATCTGGAACAGCAACAGGCTAATGCCGACCCAGACCTCCCGGTCGATCCGCGCAAAGC‑GGCCGGCGAAGCCGCTATCGCCCGAGCCAAAGCGCGCAAACGGGaa < 1:1461744/144‑1 (MQ=2) cgcAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTGGATCCGCGCAAAGC‑GGCCGTCGCCGCGGCTATTGCCCGCGCGCACGCCCGAAAACgcgccc > 3:127435/1‑146 (MQ=11) gtaaaGCAGCCGTCGAAGCAGCTATTGCCGGGGCCAAAGCGCTCAAGCTCGAAGAGCAACAGGCTAATGCCGACCCAGAACAACAGGGCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACa < 5:855719/149‑1 (MQ=14) cAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCAGTAGACGCGGCTATTGCCCGCGCGAAAGCCCCAAAACgggccc > 2:741141/1‑146 (MQ=14) aactgccgTTGAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTAGATACAACCAAAGC‑GCCACTAGAAGCCGCTAATTCACGCGCAAAATCTAGCTATCGGGAAAAGCa > 4:427809/5‑150 (MQ=9) aGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTTGATCCGCGCAAAGCGCGCTG‑CGAAGCGCCTAATGCACGAGGCAACGCACCCAACCTGCAACCGCa > 1:660429/1‑150 (MQ=11) gccgccGTCGAAGCCGCTATTGCCCGAGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCCGTAGCAGCCGCTATTGCCCGAGCAAAAGCACACAAACACGAACAGCaa > 8:232396/1‑150 (MQ=14) ccgccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑GGCAGTAGCAGCGGCTATTGCCCGCGCAAAAGCCCACAAAcagcacccgcgacc > 2:1727369/1‑138 (MQ=14) ccgccgGCGAACCCGCTATTGCCCGTGCCAAAGCTCGCAATCTGTAACAGCAACAGGCTAATGCCGACCGAGAACAACAGTTCGCTCCTCTCAAAGG‑CTCCGTCGATGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAAcc < 3:1030294/151‑1 (MQ=255) ccccgTCGCAGCCCCTATTGCCCGTGCCAAAGCTCTCAATCTGGAACAGCAACAGGCTAATGCCGATCCATAACATCAGGTCGATCCGCGCAAAGG‑CGCCGTCGAAGACGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCg < 2:1834279/149‑1 (MQ=14) gccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGTGCATGGGAACCGGGGAGCTCGGCGCTAAGC‑TGCCCTCGCAGCCGCTATTCCCCGCGCGACTGCTGGCAAACTGGAACAGCACCCgg > 7:489038/1‑151 (MQ=2) ccgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTTGATCCGAGAAAAGA‑AGCCCTACAAGAAGCTAAAGACAGAGCCAAAAAGAGAAAAAGGCAACAGACACCgg > 4:458343/1‑150 (MQ=2) ccgTCCCAGCCGCTAGCCCCCGCGCCAACGCTCGCAATGTGGAACAGGAACAGGCTAAAGCCGATCCAGATCACGTACTGGATGCGAGCAGAGG‑GGGCTTCGAAGCCGCTATGGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGc < 7:25863/151‑1 (MQ=255) cgTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAGTAAGCCGACAGCACAGCAGGTCGCTCCCCGCAAAGC‑AGCCCTGGAGGCGTCTATTGCACGAGCAAAAGCCCGCACGCgggcgccgcgcccggcg > 5:1215534/1‑137 (MQ=2) gttgAAGCAGCTATCGCCCGCGCCAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGATCCAGAACAACAGGTCGATCCGCGCAAAGA‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCTCGCAAGCGCGACCAggagcgga > 4:518191/4‑141 (MQ=14) gTCGAAGCCGCTATTGCCCGTTCCAAAGCCCGCAAGCTGGAACAGCAACAGTCTAATGCCGATCCAGAACAACAGGGCGATCCTCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTa < 1:920306/151‑1 (MQ=14) tagAAGCCGCTAGTGCACGTGCCAAAGCTCGCAAGCGGGAACAGCAACAGCCTAATGCCGACCCAGAACCAGATGGCGATCCGCGCAAACC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTa < 3:90504/148‑1 (MQ=14) cGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAAC‑ATCCGAAGAACCACCTATTGCCAAAGACAAAGCCAGCAAGAGGGAAAATCAACCGTCTAAt > 2:193273/1‑151 (MQ=14) gAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAAGAACAGGTAGATCCGCGCAAAGC‑CGCAGTAGCAGCCGCTATTGCCCGCGCAAAAGCCAGCAAACCCGACCAGCACCAGGCGaa > 8:1311390/1‑149 (MQ=11) cacgCCGCTATTCCGATTGCCAAAGCTCGCAAGCTGGAATATTAAAATGATAATGCGTAACCAGATAAATAGCTATATCCGCTCAATGT‑TTCCGTCGAAGACGCTATTGCGATATCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATg < 6:378997/148‑1 (MQ=255) cacccGCTATCGCCCGGGCCAAAGCACGCAATCTTGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGc < 7:1241356/148‑1 (MQ=14) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑GGCAGTAGCAGCCGCTATTACCCGCGCGAACGCCAAAAAACCGGCACAGCAACCTCCTaagcc > 2:323226/1‑148 (MQ=14) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCCGTGGACGCGGCTATTGCCCGCGCGCACGCGCGCAAAGCGGCACAGCAGCAGGGTAAtcc > 7:176411/1‑149 (MQ=14) aaGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGAAGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGACAAAGATCGCAAGCGGGAACAGCAACCggggtctgg > 8:1498038/1‑144 (MQ=14) ccGCTATTGCCCGTGCCAAAGCACGCAAGCTTGAACAGCAACAGGCTAATGCCGAGACAGAACAACAGGTCGATCCGCGCTAAGC‑CGCCGGCTAATCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGATCAGCAACCGGc < 4:1534639/142‑1 (MQ=17) gCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCACGAGCCAAAGCGCGCAAGCGGGAACAGCAACCgggggctggggcgc > 3:1303139/1‑139 (MQ=14) cTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACCCGCACAGCAACCGGCTAATTCCGAGcc > 2:1520094/1‑151 (MQ=14) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑GGCAGTAGCCGCGGCTATTGCCCGCGCGAAAGCCCAAAAACGCGACCAGCACAAGGCTAAtaacgagcc > 8:919638/1‑142 (MQ=2) tATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCAGTCGCAGCCGCTATTGCCCGCGCGAAAGCCAGCAAACGGGCACAGCAGCCGGATATAGAGGAGcc > 6:812723/1‑150 (MQ=14) aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAGTGAGGCGCCAGCACAGCAGGGCGCTCCGCGCAAAGC‑AGCCGTCGAGGCGGCTAGTGCCCGAGACAAAGCGCGCACGCGGGACCCGCACCCGGCtcgggcggcggc > 3:1688255/1‑138 (MQ=9) aTTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGACGCCGCTATTGCCCGCGCCAACGCCCGCAAACGCGACCAGCACCAGGCTAATGCGGAGcgcc > 3:960204/1‑148 (MQ=14) tGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGCAGCCGCTATTGCCCGAGCCCAAGCCCCCAAACCGGCCCAGCAGCCGGCTCATgacgaggccga > 7:693596/1‑140 (MQ=14) gcccccgccaccgCACCCCAGCTGGAACAGCAACAGGCTAATGCCGATCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCagaag < 3:87386/139‑1 (MQ=14) gCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCCGTAGCCGCGGCTATTGCCAGATCCAAAGAGCGAAAACTAGAGCAGCAAACTGCGAAtaagtagagagaac > 6:473375/1‑138 (MQ=9) cccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCAGTAGAAGCCGCTATTGCCCGCGCCAAAGCCAGCAAACGCGAACAGCAAAAGGATAAtcacgaaccaca > 6:825885/1‑137 (MQ=14) ccGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑GGCCGTAGAAGCCGCTATTGCACGCGACACAGACCGCAAACGGGAACATCAACCGGCTAATGCTGATCGagcaga > 4:888384/1‑150 (MQ=14) cgccccAAAGCCGGCAAGCTGGAACAGCAACAGGATAATGCCGAACCAGAACAACAGGGCGATCCGCGCAAAGC‑CGCCGTCGAAGCAGCTATCGCCCGAGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAAc < 5:483691/147‑1 (MQ=11) cGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGCAGCCGCTATTGCCCGCGCGAAAGCGCGAAAACGGGAACAGCAGACGGGTAATCCGGAGCCAGAAGAAc > 3:1313542/1‑151 (MQ=17) tGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCGCCCGCGGAAGAGCACCGGTCTCCGCTCCACGC‑AGCCCTCGATGGCGCTATTGCCCGCGCCAGCGGGCGCAAACGGGAACCGCCCCCGGGTAcggcgggggcggctgcggcg > 5:735790/1‑137 (MQ=2) ccAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAACAACCCAACAGGCTCAGCAACCGACAAATGCTGACGCagaagataacgg > 4:255957/1‑145 (MQ=14) cAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTAGAAGCGGCTATTGCCCGAGCGAACGCGAGAAAACGGGCACAGCACCAGGCTAATTCGGAGCCataactggtattt > 7:450110/1‑142 (MQ=14) aGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGCGAACAGCAACCGGCTATAGCGGAGCCAGAAGACCAgataca > 2:615169/1‑145 (MQ=14) cACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCAGTAGAAGCGGCTATTGCCCGCGCAAAAGCCAAAAAACCCGAACAGCACAAGGCTAATACCGAGCCAgaaaaagcaatagatcc > 6:629865/1‑140 (MQ=2) cACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCAGTAGAAGCGGCTATTGCCCGCGACACAGCACGCAAGAGGAAACAGAAACAGGGTAAAGATGTGAAAGAAGACCAGGTTGATcc > 2:556669/1‑151 (MQ=2) gCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑GGCCGTCGAAGCCGCTATTGCCCGAGCCCACGCGCGCAAACGGGAACAGCACCAGGCTAATGCGGAGCCAGAACAACAGGGTGATCcgcc > 3:359658/1‑150 (MQ=14) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTAGACGCCGCTATTGCCCGCGCGCAAGCGCGCAAACGCGCACAGCAGCAGGCTAATGCGGAGCCAGAAGAGCAGGtagctaagcga > 2:275910/1‑140 (MQ=14) aaGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCAGTCGACGCCGCTATTGCCCGAGCGAAAGCCCGCAAACGGGACCAGCACCCGGCTAAAGCCGAGCCAGAACACCACGTTGCTCCgcgc > 1:551489/1‑150 (MQ=14) tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGCAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGCGAACAGCACCAGGCTCTTCCGGAGCCAGAAGAACAGGTTGCTCCCCGCACAGc > 1:1001528/1‑151 (MQ=14) tGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCAGTCGACGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGACCAGGTTCCTCCGCGCACAGc > 1:113990/1‑151 (MQ=14) ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGGTCCGCGCAAAGC‑CGCAGGCCAAGCCGCTATTGCCCGAGCCAAATCCCGCAATCTGGAACAGAAACAGGCTAATGCGGGGGCAGAAGCGCAGGTGGGTCCgggccccggg > 1:1273604/1‑145 (MQ=11) ggAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCAGTAGAAGCCGCTATTGCCCGCGCCAACGCCAGAAAACGGGGAGAGCAACAGCCTAAGGCGGACCAAGACTCACCGGTGCATCGGCGCAAAGcg > 5:1867048/1‑150 (MQ=2) aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGcc > 1:614944/1‑151 (MQ=255) aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGGGCACAGCAACAGGCTAATGCGGAGCCAGAAGACCAGGTCGCACCGCGCACAGCGGcc > 3:1177598/1‑151 (MQ=14) aCAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTAGATCCGCGCAAAGC‑CGCAGTAGAAGCCGCTATTGCCCGCGCTAAAGCCAGAAAACCCGAACAGCAACAGGATAAAGACGAGCAAGAAAAACAGGTAGATAAACCAAAAGCTGcc > 2:498165/1‑151 (MQ=255) aGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGACGCCGCTATTGCCCGCGCGCACGCGCGCAAGCGGGAACAGCACCCGGGTCATGCGGAGCCAGAAGTACAGGTTGATCCGCGCAAAGCGGCGGt > 8:1215434/1‑151 (MQ=14) ggatcAGGATAATCACGACGCAGAAAAACATGGGGATCCTCGGAAACC‑CGCCGTGGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAATCTGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTc < 5:845972/147‑1 (MQ=11) cAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGACCAGGTTGATCCGCGCAAAGCtccggtgg > 6:270611/1‑144 (MQ=14) aCAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCACCCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGac > 7:167649/1‑150 (MQ=255) tAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTAGAAGCGGCt > 5:157033/1‑151 (MQ=255) aTGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTTGCAGCGGCTAt > 4:207429/1‑151 (MQ=255) tGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTAGAAGCCGCTATTGCCCGCGCCAAAGCCCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGAACCGAGCAAAGCTGCCGTAGCAGCGGCTAtt > 2:1297866/1‑151 (MQ=17) ccccgcccccgAACACCATGCCGATCCCCGCAAATC‑TGCCGTTGAAGCCGCTATCGCCCGAGCCAAAGCGCGCAATCTGGAACAGCAACAGGCTAATGCGGATACAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTAtt < 2:502608/141‑1 (MQ=11) gaaccAGAAGAACAGGTCGATCCGCGCAAAGC‑AGCCGTCGAAGAAGCTATTGCCCGACCGAAAGCCCGCAAGCTCGCACCGCAACCGGCTAATGCGGCGCCAGCAGCACATGTAGATCCGCGCACAGCGGCCGTCGCCGCGGCGATTggcg > 3:344048/4‑148 (MQ=2) gaaccAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAActg > 1:686891/4‑73 (MQ=9) gAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCAc > 7:1038176/1‑151 (MQ=255) gAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCAc > 5:1786790/1‑151 (MQ=255) aGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGTGCCAGAAGAACAGGGTGATCCGCGCAAAGCTGCAGTGGACGCGGCTATTGCAcg > 5:573482/1‑151 (MQ=17) aGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGACGCGGCTATTGAAcg > 4:1404853/1‑151 (MQ=255) gCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAACGCGAGCAAACGGGAACAGCACCAGGCTAATGCGGCGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGAAGCGGCTATTGCAcgc > 7:622016/1‑151 (MQ=14) cAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTAGAAGCGGCTATTGCCCgcgc > 3:636274/1‑151 (MQ=255) gAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCAAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGAAAAGCTGCAGTAGCCGCGGCTATTGCACgcgca > 6:540392/1‑149 (MQ=17) caacaGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGACGCGGCTATTGCACGCGCCaa > 5:104963/1‑149 (MQ=255) aacaGGTGGATCCTAGCAAAGC‑CGCCGTAGAAGCCGCTATTGCGAGTGTCTAAGGTTGTAATCTGGAACAGCAACAGGCTAATGCGGATCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGc < 6:993391/151‑1 (MQ=11) aacaGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCGGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACCGGGTAATGCCGAGCCAGAACAACAGGTGGATCCGCGCGAAGCGGGCTGGGAAGCGGCGAGTGcgggcggccaggg > 1:223960/1‑139 (MQ=14) aacaGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGCGCCAAAGCGCGCAACCGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGCTCGGCGCAAAGCTGCAGTATAAGAGTCTATTGCACGCGCCaa > 3:1537326/1‑148 (MQ=17) aacaGGTCGATCCGCGCAAAGC‑CGCAGTAGAAGCCGCTATTGCCCGAGCAAAAGCCCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAATCACATGATGATCCGCGCAAAGCTGCCGTAGCCGCGTATATTGCACGCGCGAAGGc > 8:79920/1‑151 (MQ=14) caGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCAGTCGCAGCGGCTATTGCCCgcgcgcagggac > 7:1528761/1‑143 (MQ=17) aGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACAGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCGGCAGTGGCCGCGGCTAATGCCCGCGCCAACGCaa > 2:699819/1‑149 (MQ=14) ccGATCCCCGTAAATC‑TGCCGGCGAAGCAGCTATTCCCCGAGCCACAGCGCGCAATCGTGAACAGCAACCGGCTAATGCGCACCCAGAACCACAGGGTGATCCGCGCAAAGCTGCCGTCGAAGCCGCTATTGCACGCGCCAAAGCACGCaa < 7:1843454/150‑1 (MQ=255) | CAAAGCGCGCAAGCTGGAACAGCAACAGGCTAATGCGGAACCAGAAGAACAGGTCGATCCGCGCAAAGCCGCCGTCGAAGCCGCTATTGCCCGTGCCAAAGCACGCAAGCTGGAACAGCAACAGGCTAATGCCGAGCCAGAACAACAGGTCGATCCGCGCAAAGC‑CGCCGTCGAAGCCGCTATTGCCCGAGCCAAAGCGCGCAAACGGGAACAGCAACCGGCTAATGCGGAGCCAGAAGAACAGGTTGATCCGCGCAAAGCTGCCGTCGAAGCGGCTATTGCACGCGCCAAAGCACGCAA > NC_000913/1708712‑1709011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |