Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,818,1580TA26.2% 341.0 / 116.4 217intergenic (‑23/+40)argZ/argYtRNA‑Arg/tRNA‑Arg
Reads supporting (aligned to +/- strand):  ref base T (63/95);  new base A (19/37);  total (83/134)
Fisher's exact test for biased strand distribution p-value = 5.23e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 222 total aligned reads displayed.

AATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTT  >  NC_000913/2818010‑2818305
                                                                                                                                                     |                                                                                                                                                     
aaTACCGCTATCTCTTCGATACCTTCATTGCTGAAGTTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGa                                                                                                                                                     <  8:549225/151‑1 (MQ=9)
 aTTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGa‑‑t                                                                                                                                                  <  7:463090/151‑1 (MQ=255)
 aTTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAAACTACGCAAGAGCGCTTCTTAGCCGAGTAGTCTCTCCAGATGAGCTACGTATGCCTCGGG‑ATATTTAATTAACTGCTGa‑‑t                                                                                                                                                  >  5:1780364/1‑151 (MQ=14)
 aTTCCGCGACCTCCTCCAACCCTTCCTAGCTGAAGATCTCGGAGAATATTTTTCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGa‑‑t                                                                                                                                                  <  5:1269222/151‑1 (MQ=14)
  ttCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTAGTTTACTGCTGa‑‑tt                                                                                                                                                 >  1:1441959/1‑150 (MQ=255)
   tcctctagatctTCGTAACCTTCCTTGCTGAAGATTTCGGAGTATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGa‑‑tt                                                                                                                                                 <  8:1214664/141‑2 (MQ=11)
   tCCGCTACCTCTTCGATACCTTCATGTCAGACGAGTTCAGACATGTTCGCTCCCCCGCTAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACAGCTGa‑‑ta                                                                                                                                                 <  3:106637/150‑1 (MQ=14)
    ccGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGa‑‑tat                                                                                                                                                <  7:545425/150‑1 (MQ=255)
    ccGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TAtt                                                                                                                                               <  4:415629/151‑1 (MQ=255)
    ccGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TAtt                                                                                                                                               <  3:302888/151‑1 (MQ=255)
     cGCTATCTCTTCTATACCTTCATTTCTGAAGTTTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTg                                                                                                                                              <  2:231873/151‑1 (MQ=255)
      ggaacatattgcaTACCTTCATTCATGAATATTTAGTATTATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGA‑‑tttttt                                                                                                                                             <  2:1450288/139‑3 (MQ=11)
      gcttcatcttgcaTACCTTAATTTCTGAAGATTTAGGAGTATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGA‑‑tttttt                                                                                                                                             <  8:1292630/139‑3 (MQ=11)
      gCTAGCTCTTCGATACGTTCATTGCTGAATATTTAGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGa                                                                                                                                             <  2:1240507/151‑1 (MQ=255)
      gCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAATTAATTTAATCCTAa‑‑tat                                                                                                                                                >  6:1264574/1‑148 (MQ=255)
      gCTACCTCTTCGATACCTTCATACCTGAATATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGA‑‑tttttt                                                                                                                                             <  4:182404/151‑3 (MQ=14)
       gttcatcttgcttACCCTCATTGATGAAGATATCGTACAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGA‑‑ttttt                                                                                                                                              <  1:1688806/137‑2 (MQ=11)
       cTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTAGTTTACTGCAGA‑‑TTTTTAt                                                                                                                                            >  2:1698751/1‑151 (MQ=255)
       cTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGAATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTAATTTACTGCTGa‑‑tat                                                                                                                                                >  8:1537872/1‑147 (MQ=255)
          ccTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTAAGACCGAAACGATACTAGCCGTTTACTATAAAAAGCTGACCTACCAATGCATATAG‑AAAATTAATTTACTGCAGagttttatagc                                                                                                                                           >  6:1710103/1‑141 (MQ=2)
          catattgtaTACGTTAATTTATGAATATTTAGTAGTATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGA‑‑ttttttgat                                                                                                                                          <  6:314768/142‑6 (MQ=11)
             ctTCGATACCTTCATTGCTGAAGTTTACGGAGAATATGGTGCATCCGTGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCg                                                                                                                                        <  8:82801/149‑1 (MQ=255)
               tggATACCTTCCTTCCTCCATATCTCGTATAAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGA‑‑ttttttgatac                                                                                                                                        <  5:43227/145‑8 (MQ=14)
               tCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTATCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGc                                                                                                                                       <  1:1236899/148‑1 (MQ=255)
                cGATACGTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGctac                                                                                                                                    <  7:261181/150‑1 (MQ=255)
                cGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGctact                                                                                                                                   <  1:1116721/151‑1 (MQ=255)
                cGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTAGTTTACTGCAGA‑‑ttttttgatcgcgct                                                                                                                                    >  7:1419462/1‑139 (MQ=14)
                 gATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTAGTTTACTGCTGA‑‑TTTTtatatagctcta                                                                                                                                   >  6:1039339/1‑142 (MQ=14)
                  atccgttCATTCCTGAAGATCTCGGAGCATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGctac                                                                                                                                    <  2:1331829/145‑1 (MQ=11)
                  atacgatCATTGCTGAATATATCGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGct                                                                                                                                      <  7:846948/142‑1 (MQ=11)
                  aTACCTTCATTGCTGAAGTTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGAt                                                                                                                                            <  3:1790172/140‑1 (MQ=25)
                  aTACCTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGAt                                                                                                                                            >  6:1794225/1‑140 (MQ=18)
                   tccggtcataaatGAATATTTCGTACTATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGctact                                                                                                                                   <  3:1036661/138‑1 (MQ=14)
                     ccTTCATTGCTGAAGGTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTAACTGCTGa                                                                                                                                                     >  3:1552993/1‑130 (MQ=255)
                      catCATTGCTGAAGATTTCGTACAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAg                                                                                                                               <  7:1680663/149‑1 (MQ=11)
                      cTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTAATTTACTGCAGA‑‑TATTtataaaccgagaaacga                                                                                                                              >  5:1381452/1‑137 (MQ=11)
                        tCATTGCTGAAGATTTCGGAGAATATGGTGCATGCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCa                                                                                                                            <  8:879857/150‑1 (MQ=255)
                         aaTTTCTGCAGATCTAGGACAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGcc                                                                                                                             <  2:1216610/149‑1 (MQ=14)
                         aaTTTCTGAATATATAGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGcc                                                                                                                             <  2:792836/149‑1 (MQ=14)
                         aaTTGCTGAAGTTTACGGAGAATATGGTGCATCCGGTAGTATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTTAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCata                                                                                                                          <  2:1750167/150‑1 (MQ=255)
                         aaTTGCTGAAGTTTACGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCata                                                                                                                          <  1:771553/150‑1 (MQ=25)
                          atatatGAATATTTAGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAg                                                                                                                               <  3:1206824/142‑1 (MQ=14)
                            ttctgcataTTTAGGATAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCgta                                                                                                                          <  4:89372/142‑1 (MQ=14)
                            tGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATc                                                                                                                        <  7:161808/150‑1 (MQ=255)
                             gCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCaa                                                                                                                      <  4:1021941/151‑1 (MQ=255)
                             gCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCaa                                                                                                                      <  5:63085/151‑1 (MQ=255)
                             gCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTAGTTTACTGCAGA‑‑TTTTTATATAGctaaaataaagaaataa                                                                                                                       >  4:1758167/1‑136 (MQ=14)
                              atGAATATTTCGTATAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCa                                                                                                                       <  8:1493660/150‑1 (MQ=14)
                              atGAAGATTACGTATAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCa                                                                                                                       <  3:8300/150‑1 (MQ=14)
                                ccaGATCTCGGACAATATGGCGCAGCCGGGAGGATTCGAACCGCCGACCGCTGTGTTCGTAGCCGAGTACTCTATCCAGCTCATCTACGGATCCATCTGG‑AAATTTATTTTACTTCGGA‑‑TACTGATACCGCTACTAAAGCCATATCAAGTa                                                                                                                   <  3:800049/149‑1 (MQ=14)
                                   gATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAaga                                                                                                                <  6:750183/151‑1 (MQ=255)
                                   gATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAaga                                                                                                                <  5:1722905/151‑1 (MQ=255)
                                    gttctggAGAATTTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAagag                                                                                                               <  5:151981/146‑1 (MQ=255)
                                    aTTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAagag                                                                                                               <  7:1119220/151‑1 (MQ=255)
                                      tacGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGa                                                                                                                                             <  5:260998/117‑1 (MQ=38)
                                       gcGGAGAATATGGGGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACTGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATg                                                                                                            <  5:318076/150‑1 (MQ=255)
                                        cGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATgg                                                                                                           <  8:359324/151‑1 (MQ=39)
                                        cGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATg                                                                                                            <  5:1183093/150‑1 (MQ=40)
                                         gtataaTATGGTGCATCCGGGAGTATTCGAACCTCCGACCGCTCGGTTCGTAGCCTAGTACTCTATCCAGCTTAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGt                                                                                                          <  2:52597/147‑1 (MQ=255)
                                          gagaATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTg                                                                                                         <  7:314952/151‑1 (MQ=39)
                                          gagaATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGACGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTg                                                                                                         <  2:1008440/151‑1 (MQ=255)
                                             aaTATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCAt                                                                                                      <  5:783462/151‑1 (MQ=39)
                                                atGGTGCATCCGGGAGTATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCAAGCTGAGCTACGGATGCATCGGC‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATcc                                                                                                    <  4:994453/150‑1 (MQ=255)
                                                          cGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCTGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTTATACAGCTACTAAAGCCATATAAAGTAAGAGATGGTGAATACCCGAGGAtta                                                                                          >  1:528872/1‑149 (MQ=14)
                                                          cGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAATTAATTTACTGCAGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATCGTGAATACGCGAGGATTct                                                                                         >  5:61733/1‑150 (MQ=11)
                                                              aggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGa                                                                                                                                                     >  1:877970/1‑89 (MQ=40)
                                                               cgacgccacccgccGACCGCGCGGTTCGTATCCGACTACTCAATCCCGCTGAGGATCTTATGCAGCGGG‑ACTTGTATTTTCCTGTTGC‑‑TTCTGACTACGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCt                                                                                    <  3:532153/139‑1 (MQ=9)
                                                                gaTTCGAACCTCCGACCGCTCGGGTCGGAGCCGAGTACTCTATCCAGCTGCGCTACCGAGGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGTTACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTc                                                                                   <  1:120044/151‑1 (MQ=14)
                                                                   tCGAACCTGCTACCGCTCGGTTCTTAGTCTTGAACTCCAAGACGCTGATCTTCTGATGTATTGGG‑TTATTTATTTTACTGGAGA‑‑TATTGTTTCCCTTAATAAAGGCATATCTCGTACTAGATGGTGCATCCGGGAGGATTCGAACCTCCg                                                                                 <  6:1490806/150‑1 (MQ=255)
                                                                     gAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAGTTATTTTACTGCTGA‑‑TATTTATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCCTACGGGAGGAtaagacgcgccgagc                                                                              >  1:1724868/1‑137 (MQ=11)
                                                                     cacccTCCGCCCGCGCGGCTCGTATCCGTGGACTCAATCCAGCTCATCCCCGGTTCGAACGGG‑ATATTTTTTTTAAGCCTTA‑‑TCGTGTTACCTCCACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGAcc                                                                              <  3:943095/148‑1 (MQ=12)
                                                                     caaCCTCCGACCGCTCGGTTCGTAGCCGAGAACTCTATCCAGCTGAGCTACGTATTCATAGGG‑AAATTTATTTTACTGCTCA‑‑TATTGATACCTCTTATATAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGAcc                                                                              <  6:712446/150‑1 (MQ=17)
                                                                      aaCCTCCGACCGCTCGGTTCGTAGCCGAGTTCTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTTTTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTACCAGATGGTGCATCCGGGAGGATTCGAACCTCCGAcc                                                                              <  3:56014/150‑1 (MQ=255)
                                                                        ccTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAAATTATTTTACTGCTGA‑‑TATTTATACAGCTAATAAAGACATATAAATTAAGAGATGTTGAATCAGGGAGTAttaaactcgacgagccg                                                                            >  8:668671/1‑135 (MQ=11)
                                                                        ccTCAGACCGCTCGTTTCGTATCCGAGTACTCTATCCATCTCATCTTCTTATGTATCGGG‑TAATTTTTTTTACTGCTGA‑‑TATTGATAACGCTAATAAAGCAATATCAAGTAATATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCt                                                                           <  8:1664866/151‑1 (MQ=17)
                                                                         cTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTAGacgcggcgagcgcgg                                                                          >  3:273392/1‑137 (MQ=14)
                                                                           cgccccgcggggTGCGGAGCCGAGACCCCAAACCCGCTGCGCTAGGGCGCCAGCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTc                                                                          <  1:251080/139‑1 (MQ=17)
                                                                           ccGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTTATACCGCTACTAAAGCCATATCAAGTAAGAGATCGTGCAACAGCGCGGAAGAGCACCTCTGACCTCTCgt                                                                        >  7:1256206/1‑150 (MQ=14)
                                                                               ccGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCg                                                                    >  1:1843566/1‑151 (MQ=255)
                                                                                cGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTTATACCGCTACTAAAGCCATATCAAGAAATAGATAGTGAATCAGGGAGAATTAGACGCGCCGACCgaagcgatcgt                                                                   >  6:950748/1‑141 (MQ=14)
                                                                                            aGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATAAAGCTAATAAAGCCATATCAAATAAGAGATGGTGAATCAGGGAGGATTAGACACTCCGACCGAATCGATAGTAGCCGAGTAca                                                        >  6:705102/1‑149 (MQ=14)
                                                                                              ccGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCAGCGCTCATCGCCGAGTagtaa                                                      >  4:1426211/1‑146 (MQ=17)
                                                                                               cGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGAt                                                                                                                                            <  2:1297577/63‑1 (MQ=255)
                                                                                               cGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACGTCGTA‑‑TATTGAt                                                                                                                                            >  1:1292433/1‑63 (MQ=14)
                                                                                                           acAGCTGTGCTACGGATGCAGCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGGCATATCAAGTACGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTa                                        <  3:88040/150‑1 (MQ=255)
                                                                                                             agatgcgCTACGGCTGCATCGGG‑AAATTTATTTTACTCCTGA‑‑TCTTGATACCGCTACTACAGCCATATCAAGTACGATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACg                                      <  3:374864/145‑1 (MQ=21)
                                                                                                               cTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCCACGCGCCGAGCGCAGCGATCGTAGCCGAGTCGTCTATCCCGCTGAGCTACggc                                    >  7:617093/1‑150 (MQ=17)
                                                                                                                agggCTACTTATGTATTGGC‑ATATTTTTTTTACTGTATA‑‑TCTTGATACCCCTCTTTTCGGAATATCTATTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGAt                                   <  6:1865902/148‑1 (MQ=2)
                                                                                                                 gAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTAGAAGCTCAGCCCCAACCGATCGTAGCCGAGTAGTATATCCAGCTGAGCTACCGATg                                  >  1:291002/1‑151 (MQ=17)
                                                                                                                 gAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATAAAGTAAGAGATGGTGCATACGGGAGAATTCGAACCACGGAGGGATCGGAAAGTAGTGGAGTAATCTATAAAGATGAGGTAGGGagg                                  >  4:838692/1‑149 (MQ=9)
                                                                                                                           aggaTCGGGCAAACTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTATGATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGaa                         <  4:538527/148‑1 (MQ=18)
                                                                                                                             gtattgcgatctttattgTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAac                       <  3:1316016/140‑1 (MQ=255)
                                                                                                                             cATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAAAAAAGGAACATCCGGGAGGATTCGAACCTACGACCGCTCGGTTAGTAGCAGAGTACTCTAACCAGCATATATAAGGATGCATCGGGAAcct                      >  4:809822/1‑151 (MQ=21)
                                                                                                                                 ggg‑ATATTTATTTTCGTGGTGA‑‑TTTTGATTTCGCTACTTAAGCAATATAAATTAATATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAacttact                  <  6:568224/151‑1 (MQ=14)
                                                                                                                                  gtgttatttttttTACTCCAGA‑‑TTTTCCTTCCCCTACTATCTGCATATCTATTATGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAacttact                  <  6:1200096/146‑1 (MQ=14)
                                                                                                                                    aaaaTTTATTTTACTGATGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAATAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAacttactt                 <  4:1514078/149‑1 (MQ=255)
                                                                                                                                     aaaTTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCCTTCCGTTCGTCGCCGAGTAGTCTCTCAAGCTGAGCTACGGATGCAGCGGGAAtcttactta                >  3:701199/1‑149 (MQ=21)
                                                                                                                                               tACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTCGAACCt                                                                                    >  4:1635729/1‑72 (MQ=25)
                                                                                                                                                  tgctgA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTACAACCTCAGACCCAACGCATAGTAGCCGAGTAATATAACCAGCTAAGCTACGGATGGATAGGGAAAAttacattaaacaataaatttt  >  6:406113/1‑138 (MQ=12)
                                                                                                                                                   tctgA‑‑TATTGCTACCGCTACTAAAGCAATATCAAGTAATAGTTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGAtttttt  <  6:1442889/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGG‑AAATTTATTTTACTGCTGA‑‑TATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTT  >  NC_000913/2818010‑2818305

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑