BRESEQ :: Evidence

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,947,481	1	.	A	25.8%	234.2 / 127.0	97	intergenic (+18/‑16)	metZ/metW	tRNA‑Met/tRNA‑Met
Reads supporting (aligned to +/- strand): ref base . (8/64); new base A (3/22); total (11/86)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.90e-02

Only 100 of 121 total aligned reads displayed.

GGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGACGC  >  NC_000913/2947331‑2947609

gtggTAAAAAAAAGGCTGCAGGAAAACCCCATCGGAGTATACTGCGCCTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑a                                                                                                                                 <  5:912046/149‑1 (MQ=14)

ggggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGt                                                                                                                                   <  5:1015821/151‑1 (MQ=255)

 gggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑a                                                                                                                                 <  4:68293/151‑1 (MQ=255)

  ggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aa                                                                                                                                <  1:1309503/151‑1 (MQ=255)

  ggTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aa                                                                                                                                <  4:1198272/151‑1 (MQ=255)

   gTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                                               <  2:777774/151‑1 (MQ=255)

   gTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                                               <  7:1189416/151‑1 (MQ=255)

   gTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                                               <  4:1479316/151‑1 (MQ=255)

   gTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                                               <  6:575861/151‑1 (MQ=255)

   gTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑aaa                                                                                                                               <  8:193230/151‑1 (MQ=255)

    tAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaa                                                                                                                               >  1:1408585/1‑149 (MQ=255)

     ataattaaGGGTGAATGAAATCTCTAGCGTAGTATACTCGGATTCCCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaag                                                                                                                             <  4:343162/144‑3 (MQ=11)

     aacaataaGGTTGAAGGAAAACCCGAGCGGAGAATATTGCGCCTCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaagc                                                                                                                            <  2:572237/145‑4 (MQ=11)

     aaaataaaGGTTGAATGAAATAGATATTGCTGTATAGTCCGAATCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaagc                                                                                                                            <  2:842311/151‑4 (MQ=11)

     aaaacaacGGTTGAAAGAAAACTAGATCGGAGTATAGTCCGCATCCACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaagc                                                                                                                            <  1:1604560/151‑4 (MQ=11)

     aaaaataaCGTTGAATGAAATCTCTTTCGTAGTATATTTGGATTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaagc                                                                                                                            <  6:322288/151‑4 (MQ=11)

     aaaaaataGGTTGGATGAAAAGGGGAGCGGAGTATAGTGGGCATCGACGGACGGGGGGTGGAGCAGCCTGGTAGCTCGTGGGGCTCATAACCCGAAGGTCGTCGGTGCAATTCCGGGCGCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                                              <  4:627310/150‑1 (MQ=18)

     aaaaaaaccgcggCATGAAAACCCGAGCGGAGTATAGTCCGCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaa                                                                                                                              <  3:1252109/137‑2 (MQ=14)

     aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTTCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                                              <  3:1437093/150‑1 (MQ=255)

     aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                                              <  6:1244425/150‑1 (MQ=255)

     aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                                              <  1:619875/150‑1 (MQ=255)

     aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAg                                                                                                                              <  2:1389662/150‑1 (MQ=255)

     aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGc                                                                                                                             <  3:1024301/151‑1 (MQ=255)

     aaaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGc                                                                                                                             <  3:518435/151‑1 (MQ=255)

      aaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCa                                                                                                                            <  4:843277/151‑1 (MQ=255)

      aaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCa                                                                                                                            <  8:1535820/151‑1 (MQ=255)

      aaaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCa                                                                                                                            <  1:857627/151‑1 (MQ=255)

      aaaaaaaGCGTGCATGAAAAAGCGAGCGGAGTATAGTCCGCCTCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaagca                                                                                                                           <  5:1683138/151‑5 (MQ=14)

       aaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAg                                                                                                                           <  1:131715/151‑1 (MQ=255)

       aaaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAATTTATTGAAGA‑AAAGc                                                                                                                             >  4:824085/1‑149 (MQ=255)

       aaaaaaGGTTGAATGAAAACTCTATGGTAGTATATTGCGAATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGT‑aaaagcag                                                                                                                          <  2:1081119/151‑6 (MQ=11)

        acaaaGGCTGCATGAAAACCAGAGCGGAGTATACTGCGCATACCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGt                                                                                                                          <  6:1579741/149‑1 (MQ=11)

        aataagcgtgaaagAAAACGAGTGGGTAGTATACTGCGCATACACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGt                                                                                                                          <  7:802493/138‑1 (MQ=11)

        aaaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGt                                                                                                                          <  2:26487/151‑1 (MQ=255)

         aaaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTa                                                                                                                         <  2:1705955/151‑1 (MQ=255)

          aaaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTAc                                                                                                                        <  3:377347/151‑1 (MQ=255)

           aaGGTTGCATGAAATATCGAGCGGAGTATAGTGCGCATCCACTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACg                                                                                                                       <  1:1675234/151‑1 (MQ=14)

           aaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACg                                                                                                                       <  7:225335/151‑1 (MQ=255)

           aaGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATGAAAATTTAAGTAGTT‑AAAGCAGTACg                                                                                                                       >  3:190366/1‑151 (MQ=18)

            cgcttGCATGAAATCGCTTTCGTTGTATTGTGGGATTCCAGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TAAAATTTGATGAAGTAAAAGCAGTACgg                                                                                                                      <  6:1798494/148‑1 (MQ=11)

            cgcttGCATGAAAAATCGAGCGGAGTATATTGCGAATACCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACgg                                                                                                                      <  2:1633328/148‑1 (MQ=11)

            aGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATACACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCTCAACCAA‑TAAAAATTGAAGAATT‑aaaaacatagga                                                                                                                      >  6:997987/1‑141 (MQ=18)

            aGGTTCCATGAAAACCAGAGCGGAGTATTCTGCCCATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACgg                                                                                                                      <  3:1157093/151‑1 (MQ=11)

             gggtGCATGAAAACGCGAGCGTAGTATAGTGCGCATCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGt                                                                                                                     <  2:1416716/148‑1 (MQ=14)

             ggTTGCATGAAAACGCGCCGGCAGTAAAGTGCGAAGCCACGGACGGGGGGGGGCGCAGCCGGGTAGCGCGGGGGGCTCATACCCGTAAGGGCGTCGGTGC‑AATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTg                                                                                                                    <  7:608624/151‑1 (MQ=19)

             ggTTGAATGAATACTCTAGTGCTGTATATTCCGATTCCCGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGt                                                                                                                     <  8:1836587/151‑1 (MQ=14)

             ccctgaaagAAATCTCGAGGGGAGTATTGTGCGCCTCCGGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGt                                                                                                                     <  7:1536864/143‑1 (MQ=11)

              gTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTg                                                                                                                    <  3:1690795/151‑1 (MQ=255)

              gTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTg                                                                                                                    <  6:616229/151‑1 (MQ=255)

                tgaaTGAAAAATCGTTCGTAGTATATTGCGAATACCCTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGa                                                                                                                   <  8:1262072/147‑1 (MQ=11)

                tGCATGAATACTCGATCGTAGTATATTTGGAATCCTGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGa                                                                                                                   <  8:1497724/150‑1 (MQ=11)

                tGCATGAAAACTAGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTAc                                                                                                                        <  3:437787/145‑1 (MQ=14)

                tGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGa                                                                                                                   <  6:11330/150‑1 (MQ=255)

                tGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGa                                                                                                                   <  4:664878/150‑1 (MQ=255)

                tGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTTATTAACTAAAAGCAGTAcagat                                                                                                                    >  6:439218/1‑145 (MQ=17)

                ggcttGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGAc                                                                                                                  <  8:1466083/147‑1 (MQ=255)

                 gaaTGAATACTCGAGCGTTGTATAGTGCGCATCCAGGGACGCGGGGTGGAGCAGCCTGGTAGATCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcg                                                                                                                 <  7:924501/149‑1 (MQ=11)

                 gCATGAATACGCGATCGTAGTATAGTCCGAATCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAc                                                                                                                  <  7:915800/150‑1 (MQ=11)

                 gCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGAcg                                                                                                                 <  7:1131556/151‑1 (MQ=255)

                 gCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGAcg                                                                                                                 <  3:50430/151‑1 (MQ=255)

                 gCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGAcg                                                                                                                 <  7:1506864/151‑1 (MQ=255)

                 gCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGAc                                                                                                                  <  8:1602056/150‑1 (MQ=255)

                 gCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAAAAATTTCAGCAAGT‑AAAGCAGTACGGTGAcg                                                                                                                 >  3:1582720/1‑151 (MQ=255)

                  cATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGAcgc                                                                                                                <  3:1055822/151‑1 (MQ=255)

                   aTGAAAACTCTAGCGTAGTATAGTGCGCATCCTGGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcgcg                                                                                                               <  6:1586760/151‑1 (MQ=11)

                   aTGAAAACGATTGCGGAGTATAGTGGGAATACAGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGAcgcg                                                                                                               <  1:1123817/151‑1 (MQ=11)

                    tGAAAACGCGAGCGTAGTATAGTGGGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACg                                                                                                                       <  1:1500641/142‑1 (MQ=14)

                    tGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAAATTT‑ATGAAGTAAAAGCAGTACg                                                                                                                       >  2:1508740/1‑142 (MQ=255)

                     gaaatagattttgtaGTATTTTGCGATTCCTCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCgg                                                                                                              <  6:1362256/136‑1 (MQ=11)

                     gAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCggg                                                                                                             <  6:1720357/151‑1 (MQ=255)

                      aaaaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCgggg                                                                                                            <  6:1726729/151‑1 (MQ=255)

                      aaaaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCgggg                                                                                                            <  3:1854825/151‑1 (MQ=255)

                      aaaaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCggg                                                                                                             <  4:428415/150‑1 (MQ=255)

                       atacccgtgtgtagaataGTGCGATTCCGCGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGATGAAGTAAAAGCAGTACGGTGACGCGGGGt                                                                                                           <  7:1790770/136‑1 (MQ=11)

                       aaaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TAAAATTTTATGAAGTAAAAGCAGTACGgagagcggagc                                                                                                            >  4:800985/1‑143 (MQ=17)

                       aaaCCCGAGGGGAGTATACTGGGATTCCCCTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAA‑TCAAATTTGCTGAATTAAAAGCAGTACGGTGACGCGGGGt                                                                                                           <  7:820050/151‑1 (MQ=11)

                        aaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTg                                                                                                          <  5:1821625/151‑1 (MQ=255)

                        aaCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTg                                                                                                          <  4:900947/151‑1 (MQ=255)

                         aCGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTgg                                                                                                         <  4:316712/151‑1 (MQ=255)

                            cgAGGGGAGTATAGTGCGCATGCACGGAAGCTGTTTGGAGCAGTCTGGTAGCTCGTCGGTCTCATAAGCCGAAGGTCGTCGGTTCAAATCATGCAGCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagc                                                                                                      <  8:345948/151‑1 (MQ=17)

                             gAGCGTAGTATAGTGCGCATCACCGGACGCGGGGTGTAGCAGCCTGGTAGCTCGTCTGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAATT‑AAAGCAGTACGGTGACGCGGGGTGGagca                                                                                                     <  1:115213/151‑1 (MQ=17)

                             gAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGTCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagca                                                                                                     <  1:1707554/151‑1 (MQ=255)

                             gAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGGCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagca                                                                                                     <  3:149661/151‑1 (MQ=255)

                              cgCGTAGTATACTGCGCATCCACGGACTCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAACCAGTACGGTGACGCGGGGTGGagcag                                                                                                    <  3:25366/150‑1 (MQ=255)

                              cgCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGagcag                                                                                                    <  5:1829832/150‑1 (MQ=255)

                                cGGAGTATAGTGAGCATCCACGGAATCGTTGTGGAGCAGCCTGTTAGCTCGTCGGTCTCATAACCCGAAGGTCGTAGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCACTACGGTGACGCGGGGTGGAGCAGcc                                                                                                  <  2:386709/151‑1 (MQ=17)

                                 ggAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCt                                                                                                 <  1:843428/151‑1 (MQ=255)

                                  gAGTATAGTGCGCATCCACGGACTCGGGGTGGAGGAGCCTTGTAGCTCGTCGGTCTCATAACCCGAAGGTCTTCGGTTGAAATCCGGCCCCCTCAACCAATTAAATTTTGATGAAGC‑ATTGCAGTACGGTGACGCGGGTTGGAGCAGCCTg                                                                                                <  6:542500/151‑1 (MQ=255)

                                      ataGTGCGCATCGCCGGACGCGTTGTGGAGGAGCGTGGTAGCTCGTGGGGCTCATAACCCGAAGGTCGTCGGTTCAAATACCGCACCCGCAACGAATTATAATTTGATGAAGT‑ATAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAg                                                                                            <  2:916305/151‑1 (MQ=14)

                                      agaGTGCGCAGCCACGGACGCGGGGGGGAGCAGCCTGGTAGCTCTTCGGGCTCATAACCCGAAGGGCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTa                                                                                             <  1:578428/148‑1 (MQ=255)

                                         gTGCGCATCCCCGGACTCGGGCGGGAGCAGCCAGGTCGCTCGTCGGCCTCATAAGCCCAAGCTCGTCTGTTCATATCCGTCCCCCGGAACGAATTAACATTTGCTGAAGT‑CTCGCAGTCCCCGGACGCGGGGTGGAGCAGCCTGGTAGCtc                                                                                         <  8:235721/151‑1 (MQ=9)

                                                ccgaCGGACTCTGGGTGGAGCAGCCTGGTAGCTCGTCGGTCTCATAACCCGAAGGTCGTCGGTTCAAAACCTGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCACTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGc                                                                                  <  6:719344/148‑1 (MQ=14)

                                                 ccACTGACGCGGGGTGGAGCAGCCTTTTATCTAGTCTGGCTCATAACCCGAATGTCGTCGGTTCAAATCCGGCCCCGGCAACCAATTAAAATTTGTTGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGc                                                                                  <  5:524287/150‑1 (MQ=14)

                                                              gTGCAGCAGGGTGGTCGCTCGTCGCCCTCATAACCCGAAGCGCGGCGCGGCAAAACACCCCGCCGCAACGAATTATCTTTTGTAGAAGA‑CACCCCCTCCCGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAg                                                                     <  4:556798/150‑1 (MQ=2)

                                                                                                              ttCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAAt                                                      >  7:1356791/1‑117 (MQ=255)

                                                                                                                         ccgggtccaCCAAATAAATTTTGAAGAATT‑ATAGTAATCCAGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACg         <  3:633573/143‑1 (MQ=14)

                                                                                                                            ccGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGc                                           >  5:1731411/1‑114 (MQ=255)

                                                                                                                                aaCCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATAATATTACATGAAGAAACCGCAGTatgtttaagg  >  3:1347815/1‑142 (MQ=14)

                                                                                                                                                   aaGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCtcgt                                                                                       >  2:249672/1‑47 (MQ=38)

                                                                                                                                                   aaGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCtcgt                                                                                       <  1:247949/47‑1 (MQ=38)

GGGGTAAAAAAAAGGTTGCATGAAAACGCGAGCGGAGTATAGTGCGCATCCACGGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATTAAAATTTGATGAAGT‑AAAGCAGTACGGTGACGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAATCCGGCCCCCGCAACCAATCAAATTTGATGAAGTAAAAGCAGTACGGTGACGC  >  NC_000913/2947331‑2947609

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`