| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 4125178 | 148 (6.500) | 5 (0.250) | 4/90 | NT | 3.5% | coding (674/837 nt) | dam | DNA adenine methylase |
| ? | W3110S.gb | = 4125213 | 145 (7.210) | coding (709/837 nt) | dam | DNA adenine methylase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/4125103‑4125178‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgat‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTC < W3110S.gb/4125213‑4125144 GTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTG < 1:1961521/71‑1GTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTG < 1:186660/71‑1GTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTG < 1:1637522/71‑1 TTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGC > 1:434641/1‑71 TTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGC < 1:522330/71‑1 TTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCT > 1:1746361/1‑70 TACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTG < 1:1621620/70‑1 AACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTGAT > 1:1265737/1‑64 AGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTG < 1:452109/52‑1 GCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTGAT‑ACCACTCACGCGTT > 1:1772951/1‑70 ATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTG < 1:1556308/50‑1 TGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCT > 1:843874/1‑46 TGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCT > 1:846293/1‑46 CGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTGATCTCCAATCACGCGTTAACATCGTAT > 1:1137404/1‑64 CGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTGA < 1:349595/38‑1 GAAGGTCTGGTTGAGCGCCATATTCCAGTGCTGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTG > 1:1906038/1‑67 AAGGTCTGGTTGAGCGCCATATTCCAGTGCTGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGAT < 1:2039804/71‑1 GAGCGCCATATTCCAGTGCTGATCTCCACTCACGCGTTAACATCGTATCGTGATT < 1:1406212/55‑1 GCTGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGA > 1:1502263/1‑71 GCTGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGA > 1:465990/1‑71 GCTGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGA > 1:2075499/1‑71 GCTGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGA > 1:511557/1‑71 GCTGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGG > 1:2007184/1‑59 CTGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGA < 1:2071654/41‑1 TGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACC > 1:841563/1‑71 TGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACC > 1:284079/1‑71 TGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACC > 1:605391/1‑71 TGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATAT < 1:69297/55‑1 TGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACT < 1:1149727/48‑1 TGAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACT < 1:1715872/48‑1 GAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCT > 1:776540/1‑71 GAT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATA > 1:375586/1‑53 AT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTT > 1:975721/1‑71 AT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCT < 1:705971/70‑1 AT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACC < 1:1964366/69‑1 AT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAA > 1:1403287/1‑62 AT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGC > 1:1162895/1‑58 AT‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGG < 1:384606/55‑1 AT‑ACCACTCACGCGGTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTT > 1:1964992/1‑71 T‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTC < 1:1780349/71‑1 GTTTTACGCTTGAACAACAAGCGCATCTGGCGGAGATCGCCGAAGGTCTGGTTGAGCGCCATATTCCAGTGCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/4125103‑4125178‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgat‑ACCACTCACGCGTTAACATCGTATCGTGATTGGAGATCAGCACTGGAATATGGCGCTCAACCAGACCTTC < W3110S.gb/4125213‑4125144 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |