Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | W3110S.gb | 470,675 | C→T | G272G (GGC→GGT) | mdlB → | fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | W3110S.gb | 470,675 | 0 | C | T | 99.1% | 318.4 / NA | 116 | G272G (GGC→GGT) | mdlB | fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily |
Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (115/0); minor base A (1/0); total (116/0) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 116 total aligned reads displayed.
TCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATTGAAGTGGGC > W3110S.gb/470644‑470705 | tcattcatTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1065832/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTtct > 1:1197833/1‑36 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCTCCAGCGGCACCATTGAAGTGGGc > 1:866260/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGc > 1:297726/1‑44 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTggg > 1:1037423/1‑61 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTggg > 1:636846/1‑61 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTggg > 1:1068669/1‑61 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTggg > 1:754574/1‑61 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTggg > 1:1258110/1‑61 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:596142/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:553198/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:559306/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:574916/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:5839/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:530483/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:598558/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:631842/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:660101/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:551986/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:551757/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:750594/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:528684/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:521541/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:506390/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:471974/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:447709/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:427160/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:423535/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:397894/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:395482/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:851723/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:980861/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:976301/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:955297/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:954540/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:94379/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:934292/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:932645/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:93185/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:91899/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:889480/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:875380/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:706158/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:847018/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:834863/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:830164/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:826463/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:79498/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:790153/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:327579/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:735651/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:735498/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:719781/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1206592/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1363409/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1338010/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1312743/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1312475/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1288044/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1281465/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1261551/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1247607/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1230204/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:121597/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1215033/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1374900/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1205328/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1202138/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:118709/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1145417/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1134803/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1099688/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1087754/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1083499/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1074067/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1040881/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1037167/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:163888/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:33045/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1001658/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:321057/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:306320/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:304772/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:248313/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:231468/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:228356/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:205127/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:185890/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:374675/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:155746/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:149497/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1472576/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1441288/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1433330/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1418217/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1398070/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1378484/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:1378047/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTTTGGTTTCTCCGCCAGCGGCACCATAGAAGTGGGc > 1:279049/1‑62 (MQ=255) tCATTCTTTGTGGCTTGTTGATGCTGTATGGATTCTCCGCCAGCGGCACCATTGAAGTGGGc > 1:65116/1‑62 (MQ=255) | TCATTCTTTGTGGCTTGTTGATGCTGTTTGGCTTCTCCGCCAGCGGCACCATTGAAGTGGGC > W3110S.gb/470644‑470705 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |