New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	minE	= 138525	65 (1.250)	4 (0.090)	3/92	NT	6.8%	coding (1642/2598 nt)	htrE	predicted outer membrane usher protein
	?	minE	= 138536	51 (1.090)					coding (1631/2598 nt)	htrE	predicted outer membrane usher protein

TCGTCAGTGTCGCCGTCTTCATTCCATGAACGCTGGGCACTGACACTGTAGCTGCCCCAGGATGTACTGTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/138452‑138525 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttactCTATTGGCTACAGTAACAGTACATCCTGGGGCAGCTACAGTGTCAGTGCCCAGCGTTCATGGAATG  <  minE/138536‑138471                                                                                                                                              TCGTCAGTGTCGCCGTCTTCATTCCATGAACGCTGGGCACTGACACTGTAGCTGCCCCAGGATGTACTGT                                                                        >  1:2634264/1‑70 TCGTCAGTGTCGCCGTCTTCATTCCATGAACGCTGGGCACTGACACTGTAGCTGCCCCAGGATGTACTGT                                                                        <  1:2900487/70‑1                      TTCCATGAACGCTGGGCACTGACACTGTAGCTGCCCCAGGATGTACTGTTACTCTATTGGCTACAGTAAC                                                   <  1:1889220/70‑1                      TTCCATGAACGCTGGGCACTGACACTGTAGCTGCCCCAGGATGTACTGTTACT                                                                    >  1:1910952/1‑53                                           ACACTGTAGCTGCCCCAGGATGTACTGTTACTCTATTGGCTA                                                          >  1:1787774/1‑42                                           ACACTGTAGCTGCCCCAGGATGTACTGTTACTCTATTGGCTA                                                          >  1:574964/1‑42                                                   GCTGCCCCAGGATGTACTGTTACTCTATTGGCTACAGTAAC                                                   >  1:3449266/1‑41                                                                      TTACTCTTTTGGCTACAGTAACAGTACATCCTGGGGCAGCTACAGTGTCAGTGCCCAGCGTTCATGGAATG  <  1:3762386/71‑1                                                                                                                                              TCGTCAGTGTCGCCGTCTTCATTCCATGAACGCTGGGCACTGACACTGTAGCTGCCCCAGGATGTACTGTTACT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/138452‑138525 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttactCTATTGGCTACAGTAACAGTACATCCTGGGGCAGCTACAGTGTCAGTGCCCAGCGTTCATGGAATG  <  minE/138536‑138471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.