| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 350570 | 42 (0.810) | 19 (0.430) +CACGCCGC |
9/86 | NT | 33.4% | intergenic (+167/+32) | glxR/purK | tartronate semialdehyde reductase, NADH‑dependent/N5‑carboxyaminoimidazole ribonucleotide synthase |
| ? | minE | 1941687 = | 48 (0.930) | intergenic (+126/+70) | ygfZ/yqfA | predicted folate‑dependent regulatory protein/predicted oxidoreductase, inner membrane subunit | |||||
GGATCGGTAGGCCGGATAAGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/350546‑350570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGC‑TGGCGCGTCTTATCAGGCCTACAAAGG > minE/1941687‑1941748 |||||||| GGATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGC‑TGG > 1:3895929/1‑71 GATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGC‑TGGC > 1:1389578/1‑71 GATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGC‑TGGC < 1:1573900/71‑1 GATCGGTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGC‑TGGC < 1:3416521/71‑1 GTAGGCCGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGC‑TGGCGCGTC < 1:2360204/71‑1 TAGGCCGGATAAGGCGTGCACGCCGCATCCGGCAG < 1:965398/35‑1 GGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGC‑TAACGCGTCTT < 1:133151/70‑1 gaCGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGC‑TGGCGCGTCTTAT < 1:1662265/69‑1 gaCGGATAAGGCGTTTACGCCGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGC‑TGGCGCGTCTTAT < 1:2368052/69‑1 CCGGAAAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCC > 1:648346/1‑46 CGGATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGC‑TGGCGCGTCTTATCA > 1:987682/1‑71 CGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCC‑ATGCCTGATGCGACGCTTTGCGCGTCTTATC < 1:2904295/70‑1 GGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGC‑TAACGCGTCTTATCAG < 1:1554587/71‑1 GATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGC‑TGGCGCGTCTTATCAtg > 1:3861018/1‑69 GATAAGGCGTTTATGCCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGC‑TGGCGCGTCTTATCAtg < 1:1401336/71‑3 ATAAGGCGTTCACGCCGCATCCGGCAGTTGTGCACCAATGCt < 1:3276618/42‑2 TAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGC‑TAACGCGTCTTATCAGACC < 1:3457494/71‑1 TAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGC‑T > 1:283239/1‑53 AAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGC‑TAACGCGTCTTATCAGACC > 1:230984/1‑70 GCGTTCACGCCGCATCCGGCAGTCGTGCGCC‑ATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTAC < 1:877651/70‑1 CGTTCACGCCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGC‑TAACGCGTCTTATCAGGCCTACAA < 1:1261151/71‑1 TCACGCCGCATCCGGCAGTCGTGCGCAGATGCCTGATGCGACGC‑TAACGCGTCTTATCAGACCTACAAAtt > 1:3835603/1‑69 CCGCATCCGGCAGTTATGCGCAGATGCCTGATGCGACGC‑TGGCGCGTCTTATCATGCCTAC > 1:876036/1‑61 CGCATCCGGCAGTTGTACGCAGGTGCCTGATGCGACGC‑TGGCGCGTCTTATCATGCCTACg > 1:3914912/1‑60 |||||||| GGATCGGTAGGCCGGATAAGGCGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/350546‑350570‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGC‑TGGCGCGTCTTATCAGGCCTACAAAGG > minE/1941687‑1941748 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |