| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 998811 = | 43 (0.830) | 3 (0.060) | 3/94 | NT | 8.0% | intergenic (+168/‑256) | ynfM/asr | predicted transporter/acid shock‑inducible periplasmic protein |
| ? | minE | 998856 = | 29 (0.610) | intergenic (+213/‑211) | ynfM/asr | predicted transporter/acid shock‑inducible periplasmic protein | |||||
TAATAGTAGTCTTGATCGGGTTAACTATTTTACTACTTACAAAGCAGTAGAATAACTGCGCATCAGTAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/998883‑998811‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaATAGTTAACCCGATCAAGACTACTATTATTGGTAGCTAAATTTCCCTTAAG > minE/998856‑998906 TAATAGTAGTCTTGATCGGGTTAACTATTTTACTACTTACAAAGCAGTAGAATAACTGCGCATCAGTAATA < 1:832115/71‑1 TTTTACTACTTACAAAGCAGTAGAATAACTGCGCATCAGTAATAAAATAGTTAACCCGATCAAGACTACTA > 1:2384965/1‑71 AGTAGAATAACTGCGCATCAGTAATAAAATAGTTAACCCGATCAAGACTACTATTATTGGTAGCTAAATTT < 1:1095739/71‑1 ACTGCGCATCAGTAATAAAATAGTTAACCCGATCAAGACTACTATTATTGGTAGCTAAATTTCCCTTAAG < 1:84401/70‑1 TAAAATAGTTAACCCGATCAAGACTACTATTATTGGTAGCTAAATTTCCCTTAA < 1:3502063/54‑1 TAATAGTAGTCTTGATCGGGTTAACTATTTTACTACTTACAAAGCAGTAGAATAACTGCGCATCAGTAATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/998883‑998811‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taaaATAGTTAACCCGATCAAGACTACTATTATTGGTAGCTAAATTTCCCTTAAG > minE/998856‑998906 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |