| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3750592 | 0 (0.000) | 120 (2.010) | 35/120 | 0.1 | 100% | intergenic (‑104/‑69) | tnaA/insH | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/IS5 element protein |
| ? | W3110S.gb | 3751792 = | 0 (0.000) | intergenic (+151/+116) | insH/tnaC | IS5 element protein/tryptophanase leader peptide | |||||
Only 100 of 125 total aligned reads displayed.
ATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750521‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ct‑aaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA > W3110S.gb/3751792‑3751859 ATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTAC > 1:3184481/1‑69 TGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAAC > 1:2913628/1‑70 AATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTA < 1:4487175/71‑1 TATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAA > 1:2984780/1‑71 TATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAA > 1:62504/1‑71 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAACAAGTAAA > 1:4363260/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAACAAGTAAA > 1:1644055/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAATCAAGTAAAT > 1:1421915/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATA < 1:4261397/71‑1 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAAT > 1:2758378/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAAT > 1:645410/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAAT > 1:1991874/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAAT > 1:1954355/1‑70 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAA > 1:2217742/1‑69 ACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAA < 1:4681818/70‑1 TGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGA > 1:3395248/1‑69 TGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGA > 1:740945/1‑69 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGA < 1:3559942/69‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGA < 1:3852923/69‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGA < 1:4207850/69‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGA < 1:94479/69‑1 TATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGA < 1:4269007/68‑1 TATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGA < 1:2072476/68‑1 ATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGA > 1:441580/1‑69 TACCGATTAATTCGCCAGATATCTATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATG < 1:4421247/70‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATG < 1:2083332/70‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGAT < 1:1169471/69‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATA < 1:2485995/59‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATA < 1:2068446/59‑1 ACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGAC > 1:2105989/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACC > 1:1020543/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACC > 1:2855230/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACC > 1:2466281/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACC > 1:2172354/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACC > 1:1395159/1‑71 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGAC < 1:1864084/70‑1 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGA > 1:2661355/1‑66 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGA > 1:2772061/1‑66 TTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGAC < 1:3423420/66‑1 TAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTTAATAAACGAGAGATGACCTTTG > 1:3751977/1‑70 TAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAAC > 1:878101/1‑43 TAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAAC > 1:1784146/1‑43 AATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGC > 1:1689565/1‑70 CGCCAGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAG > 1:3502937/1‑71 AGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:3769966/71‑1 AGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:124974/71‑1 AGATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:1136815/71‑1 GATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGA < 1:565065/49‑1 GATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGA < 1:3520424/49‑1 ATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATA < 1:3182565/41‑1 ATATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATA < 1:1849228/41‑1 TATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:1033450/1‑71 TATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:1352593/1‑71 TATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:1965443/1‑71 TATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:2760286/1‑71 ATATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:1241533/1‑70 TATATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGA < 1:3171525/45‑1 TATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAG < 1:1860002/71‑1 TATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT > 1:1329263/1‑68 TATGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAA > 1:1546997/1‑38 TATGCAAGCACCATCATTTACC‑AAAACAAGTAAATAAA > 1:4007804/1‑38 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:709192/70‑1 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:2128828/70‑1 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:479829/70‑1 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:2931719/70‑1 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:1912991/70‑1 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:4050189/70‑1 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:45609/70‑1 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:4206909/70‑1 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:1537610/70‑1 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGAC > 1:1078969/1‑47 TGCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGAC > 1:4580508/1‑47 GCAAGCACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:306316/69‑1 CACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGC > 1:2540517/1‑70 CACCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATA > 1:765716/1‑66 CACAATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATA > 1:3390650/1‑68 CCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:94436/62‑1 CCATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:657148/62‑1 CATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATA > 1:1072566/1‑63 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATTACCATTGCAAAAGGCA > 1:1685002/1‑51 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:1751549/1‑70 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:702416/1‑70 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:680066/1‑70 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:3721758/1‑70 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:2072818/1‑70 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:4634814/1‑70 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:4052885/1‑70 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA > 1:3238007/1‑60 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA < 1:3880438/58‑1 ATCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTCCAAAAGGCAAAATTAAGATATAGCAAAC > 1:1314236/1‑70 TCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:4219699/70‑1 TCATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA > 1:899866/1‑70 ATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:1426181/57‑1 ATTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAA > 1:3947299/1‑51 TTTACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATA < 1:4532917/71‑1 TTTACT‑AAAACAAGGAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:46140/67‑1 TACT‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:478657/1‑67 T‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:4636037/51‑1 T‑AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:2448880/51‑1 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA < 1:4418356/69‑1 ATCCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACT‑AA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750521‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ct‑aaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA > W3110S.gb/3751792‑3751859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |