| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 1368855 | 36 (0.600) | 26 (0.450) +AT |
10/94 | NT | 54.6% | coding (560/948 nt) | dusC | tRNA‑dihydrouridine synthase C |
| ? | minE | 1611749 = | 9 (0.150) | coding (1404/1404 nt) | eutA | reactivating factor for ethanolamine ammonia lyase | |||||
AGCCGCTGGCGAATATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1368837‑1368855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCA > minE/1611749‑1611815 || caCCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:1725937/3‑71caCCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACC < 1:2766843/47‑1 aCCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGC > 1:3846587/2‑70 aCCGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAA > 1:1609139/2‑61 aCCGCTGGCGAATACAGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAA > 1:2722785/2‑61 CGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCA > 1:2174734/1‑70 CGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGA > 1:1131353/1‑39 CGCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGT < 1:3350481/37‑1 GCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA < 1:1522625/71‑1 GCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA < 1:1901858/71‑1 GCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA < 1:818966/71‑1 GCTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTC < 1:1867202/42‑1 CTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:754419/1‑70 CTGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAA > 1:3638509/1‑70 TGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGA < 1:656680/36‑1 TGGCGAATACCGCATTCAGGAAGGAAATGCGAGTGA < 1:1624554/36‑1 GCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGA < 1:3254188/71‑1 GCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:3709041/69‑1 GCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:2312531/69‑1 GCGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGG < 1:659449/49‑1 CGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGA < 1:1995104/70‑1 CGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:696912/68‑1 CGAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:79003/68‑1 GAATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGA < 1:2697180/56‑1 ATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCG < 1:937855/71‑1 ATACCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATC > 1:696642/1‑56 tacCGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCG > 1:2459757/4‑70 CGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACC < 1:3818516/71‑1 CGCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACC < 1:601844/71‑1 GCATTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCA < 1:3097524/71‑1 TTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAG < 1:680152/60‑1 TTCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAA < 1:1678677/57‑1 || AGCCGCTGGCGAATATCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > minE/1368837‑1368855‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCAGGAAGGAAATGCGAGTGATTTCACCGTCACCGGCACAACCGATCCGCCAAAAAGAGGCGTACCA > minE/1611749‑1611815 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |