Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,239,609 T→G 12.8% intergenic (+64/‑335) alx → / → sstT putative membrane‑bound redox modulator/sodium:serine/threonine symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,239,6090TG12.8% 324.1 / 31.6 123intergenic (+64/‑335)alx/sstTputative membrane‑bound redox modulator/sodium:serine/threonine symporter
Reads supporting (aligned to +/- strand):  ref base T (75/26);  new base G (5/9);  total (80/43)
Fisher's exact test for biased strand distribution p-value = 9.92e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01

Only 100 of 125 total aligned reads displayed.

CGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATT  >  NC_000913/3239464‑3239758
                                                                                                                                                   |                                                                                                                                                     
  tggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAggg                                                                                                                                                 <  2:2680945/150‑1 (MQ=255)
    gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGgag                                                                                                                                               >  1:831320/1‑150 (MQ=255)
    gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGgag                                                                                                                                               >  2:2623929/1‑150 (MQ=255)
    gtgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTGGAAGGgag                                                                                                                                               <  1:2382468/150‑1 (MQ=255)
     tgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTGGAAGGgaga                                                                                                                                              <  2:2897059/150‑1 (MQ=255)
      gtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTGGAAGGGagag                                                                                                                                             <  1:1409039/150‑1 (MQ=255)
      gtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTGGAAGGGagag                                                                                                                                             <  1:2717832/150‑1 (MQ=255)
       tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                            >  2:1828513/1‑150 (MQ=255)
       tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                            >  2:71179/1‑150 (MQ=255)
       tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                            >  2:571272/1‑150 (MQ=255)
       tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                            >  1:1620061/1‑150 (MQ=255)
       tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACAGGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAgg                                                                                                                                            >  2:1687471/1‑150 (MQ=255)
        ttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAggg                                                                                                                                           >  1:837188/1‑150 (MQ=255)
        ttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAggg                                                                                                                                           >  2:3033904/1‑150 (MQ=255)
         tGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGt                                                                                                                                          >  2:1907502/1‑150 (MQ=255)
          ggCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTc                                                                                                                                         <  2:1442342/150‑1 (MQ=255)
          ggCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTc                                                                                                                                         <  1:53178/150‑1 (MQ=255)
          ggCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTc                                                                                                                                         <  1:1131504/150‑1 (MQ=255)
           gCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCg                                                                                                                                        >  2:2403956/1‑150 (MQ=255)
           gCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCg                                                                                                                                        >  2:2803457/1‑150 (MQ=255)
           gCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCg                                                                                                                                        >  2:2835399/1‑150 (MQ=255)
           gCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCg                                                                                                                                        >  2:3133284/1‑150 (MQ=255)
                 ttgtgtTGACTTTTCTTATCAACGCCTGGGTGAATTTTCGTCATGATTAGCAGCGTGGTTGATAATTTTTTATCTGCCTACGACGTGTACGCTGTGATTATGATGAGGACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGTGTTGa                                                                                                                                  <  2:2627260/148‑1 (MQ=255)
                 gggTTATGACTTTTATTATCAACGCGTGGGTTATTTATGGTCATTATAAGCTGGGGGGTTTATATTTTTTATTCTGCCTATGCCGTGTACCCTGTAATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCTGGGAGTGGGTCGGGGTGa                                                                                                                                  <  1:2565987/149‑1 (MQ=255)
                      atgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTa                                                                                                                             >  2:1489113/1‑150 (MQ=255)
                      atgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTa                                                                                                                             >  2:427041/1‑150 (MQ=255)
                      atgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTa                                                                                                                             >  2:928541/1‑150 (MQ=255)
                      atgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTa                                                                                                                             >  1:2692443/1‑150 (MQ=255)
                      atgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GGTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTa                                                                                                                             >  2:427095/1‑150 (MQ=255)
                       agaCGTTAATTATCAACGCCTGGGTGAAATATCGGCATGATAAGCAGCGGGGTGGAAAATTTTTAATCTCCCTAAGCCGTGTACCCTGACATTAACATGAGCACC‑GTATT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTaa                                                                                                                            >  2:1417802/2‑150 (MQ=255)
                           gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                        >  1:515302/1‑150 (MQ=255)
                            tttATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAttttt                                                                                                                       >  2:1560936/1‑150 (MQ=255)
                            tttATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAAttttt                                                                                                                       >  1:715173/1‑150 (MQ=255)
                            tttATTATAAACGCCTGGTTGAATTATCGGCATGAAAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCGTCCAGGGAGAGGGTCGGGGTGAGGGTAAttttt                                                                                                                       >  2:1612661/1‑150 (MQ=255)
                             ttattaTCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTc                                                                                                                      >  1:2121870/1‑150 (MQ=255)
                                ttatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCa                                                                                                                   >  2:2789149/1‑150 (MQ=255)
                                ttatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTCTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCa                                                                                                                   >  1:3038871/1‑150 (MQ=255)
                                     aaCGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAt                                                                                                              >  1:2318970/1‑150 (MQ=255)
                                          cTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTgg                                                                                                         >  1:2436789/1‑150 (MQ=255)
                                           gggttGAATTAGCGCCATGATACGCCGGGGGGTGGATAATTTTAATTCTCCATACCCGGTGTACCCTGAATTTAAAATGCGCCCC‑GTTTT‑CGCCCTCCCCTTGCCCGGGAGTGGGTCGGGTTGTGGGTAATTTTTCGCACCGATGCTGGc                                                                                                        <  2:3078023/146‑1 (MQ=255)
                                              gTGAATTATCGGCATGATACGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTg                                                                                                     >  1:3181234/1‑150 (MQ=255)
                                                 aaTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                                                                                  >  2:2522865/1‑150 (MQ=255)
                                                        ggCATGATAAGCAGCGGGGTGGATAATTAGTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCGTCCCGGGAGAGGGTCGGGGTGAGGGTAATTGTTCGCACCGATGCTGGCCGGTTCCCCTccc                                                                                           >  2:848422/1‑148 (MQ=255)
                                                         gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                                                                                          >  2:720372/1‑150 (MQ=255)
                                                         gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                                                                                          >  2:2709427/1‑150 (MQ=255)
                                                         gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                                                                                          <  2:2121870/150‑1 (MQ=255)
                                                            tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTa                                                                                       >  2:205214/1‑150 (MQ=255)
                                                              atacgatgcGGGGTGTTTATTTTTTATTCTGCACATGCCGTGTCCCCTGTCATTAACTTGAGCACG‑GTTTT‑CTCCCTCTCCGTTCCTGGTTGTGGTTGGGGGTGTGTGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAc                                                                                     <  2:2848366/143‑1 (MQ=255)
                                                                  gctggggggTGTATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCCGGGTGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctc                                                                                 <  2:1624512/145‑1 (MQ=38)
                                                                  gctggggggTGGTTTTTTTTTACTCTGCCTACGCCGTGTACCGTGTCTTTAACCTGCGCCCG‑GTTTT‑CGCCCTCTCCCTCCCGGGGTGGGGGGGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctc                                                                                 <  2:2011975/145‑1 (MQ=19)
                                                                  gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctc                                                                                 >  2:2548446/1‑150 (MQ=255)
                                                                   ccggggggTTTATATTTTTTAATCTCAATACGCCTTGACCCCTGT‑ATTAAAATTGCCACCGGTTTT‑CCCCCTCCCCCTCCCCGGTTGTGGGTGGGGTTGTGGTAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctct                                                                                <  2:1663895/146‑1 (MQ=255)
                                                                     gcGGGGTGTATAATTTTTAATCGGCCTACGCCGTGTACCCTGTCATTAAAATGAGCACC‑GTTTA‑CTCCCCCTCCCTTCCCGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTcc                                                                              <  1:3164191/150‑1 (MQ=37)
                                                                        gggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCa                                                                           >  2:3139186/1‑150 (MQ=255)
                                                                        gggTGGATAATATTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCa                                                                           >  2:475146/1‑150 (MQ=255)
                                                                           tgtatatTTTTTAATGTGCATACGCGTTTTACCCTTTATTTAAATTTTGCACG‑TTTTT‑CTCCCTCTCCCTTCATTTGATTGTGTTGTTGTTTGTTTAATTTTTCGAACCGATGCTGGCCTGTTCTCCTCACCCTAACCCTCTCCCCAAAc                                                                        <  2:2838818/147‑1 (MQ=255)
                                                                             gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                                                                      >  1:1143428/1‑150 (MQ=255)
                                                                             gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                                                                      >  2:1342758/1‑150 (MQ=255)
                                                                              aTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGgaga                                                                                                                                              <  1:2425637/77‑1 (MQ=255)
                                                                              aTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGgaga                                                                                                                                              >  2:2425637/1‑77 (MQ=255)
                                                                               tAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCATGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgggg                                                                    >  1:1913806/1‑150 (MQ=255)
                                                                               tAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACGCTAACCCTCTCCCCAAACgggg                                                                    >  1:412950/1‑150 (MQ=255)
                                                                               tAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgggg                                                                    >  2:734529/1‑150 (MQ=255)
                                                                               tAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgggg                                                                    >  1:2147617/1‑150 (MQ=255)
                                                                               tAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCGGTTCCCCTCACCCTAACCCTCTCCCCAAACgggg                                                                    >  2:3080821/1‑150 (MQ=255)
                                                                                attttttACTCGGCCTCCGCGGTGCCCCCTGTCTTTACCTGGCGCCCG‑GTTGC‑CGCCCTCGCCCTCCCGGGGTGGGGGGGGGGGTGTGGGCAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGc                                                                   <  2:359704/148‑1 (MQ=12)
                                                                                attttttAAGCTGCCTCCGCCGTGTCCCCTGTCTTTAACCTGCGC‑CC‑GTTTTGCCCCCTCCCCCTCCCGGGGAGCGGGGGGGGGTGCGGGCAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGc                                                                   <  2:2246405/148‑1 (MQ=16)
                                                                                   ttttAATCTGCCTAAGCCGTGTACCCTGTCATTACCATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAg                                                                <  2:3231757/150‑1 (MQ=255)
                                                                                    tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGGGAGGGTAATTTTTCGCACCGATGCGGGCCTGTTCCCCGCACCCTAACCCTCTCCCCAAACGGGGCGCgg                                                               >  1:1102808/1‑150 (MQ=255)
                                                                                    tttAATCGGCATAAGCCGTGAACCCTGACATTAACATGAGCACC‑GTTTT‑CGCCCCCGCCCTTCCTGGTTGTGGGTGGGGTTGTGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAgg                                                               <  1:701731/150‑1 (MQ=25)
                                                                                        aTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGAc                                                           >  1:2914143/1‑150 (MQ=255)
                                                                                             ccTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCACACGGGGCGAGGGGACTGAcc                                                      >  2:1583538/1‑150 (MQ=255)
                                                                                              cTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCg                                                     >  2:1248112/1‑150 (MQ=255)
                                                                                               tAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGa                                                    >  1:38195/1‑150 (MQ=255)
                                                                                               tAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCAAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGa                                                    >  1:811428/1‑150 (MQ=255)
                                                                                                aaGCGGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CGCCCTCTCCCTTCCTGGGTGTGGGTCGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAg                                                   <  1:752873/150‑1 (MQ=37)
                                                                                                         aCCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtttttt                                          <  2:2987323/150‑1 (MQ=255)
                                                                                                            cTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                       <  2:795781/150‑1 (MQ=255)
                                                                                                            cTGTCAGTAAGCTGAGCACC‑GTTTT‑CTCCCTCGCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                       <  2:1911769/150‑1 (MQ=255)
                                                                                                             tGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtg                                      >  2:2263860/1‑150 (MQ=255)
                                                                                                             tGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtg                                      >  2:1737693/1‑150 (MQ=255)
                                                                                                             tGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCGGTTCCCCTCACCCGAACCCACTCCCCAAACCGGGCGAGGGGACTGCCCGCGGCCTTTTTTGAtg                                      >  1:298160/1‑150 (MQ=255)
                                                                                                                 aTTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTACCCTCACCCTAACCCTCTCCCCAAACCGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgttgt                                  >  1:1233462/1‑150 (MQ=255)
                                                                                                                          aGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCt                         >  2:2651392/1‑150 (MQ=255)
                                                                                                                            cACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCAAACCCACTCCCCAAACCGGGCGAGGGGACGGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTgg                       >  1:173351/1‑150 (MQ=255)
                                                                                                                              cc‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGaa                     <  1:2936620/150‑1 (MQ=255)
                                                                                                                              cc‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGaa                     <  2:1356598/150‑1 (MQ=255)
                                                                                                                                     t‑ctccctctcccTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGct               >  2:779402/1‑149 (MQ=255)
                                                                                                                                       cgccccctccctGCCGGGGTGCGGGTGGGGGGGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCAc              <  2:2561408/148‑1 (MQ=37)
                                                                                                                                        tccctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACg             >  1:2009998/1‑150 (MQ=255)
                                                                                                                                          cctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt           >  2:706832/1‑150 (MQ=255)
                                                                                                                                          cctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt           >  2:2044087/1‑150 (MQ=255)
                                                                                                                                          cctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAACCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt           >  1:693332/1‑150 (MQ=255)
                                                                                                                                          cctctccctGGAAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTACCCTCACCCAAACCCACTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCATTTTTTATTTTGTCATCAGTCTGGAAGCCGCACGtt           >  1:1522955/1‑150 (MQ=255)
                                                                                                                                           ctctccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTg          >  1:2942776/1‑150 (MQ=255)
                                                                                                                                              tccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTGCTTTTTTGTTGTTGTCATCAGTCTGGAATCCGCACGTTgggt       >  2:1461118/1‑148 (MQ=255)
                                                                                                                                              cccctCCCGGGGTGCGGGTGGGGGGGAGGGTCATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCt       <  1:2283407/149‑1 (MQ=37)
                                                                                                                                               ccctTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCtt      >  2:2650171/1‑150 (MQ=255)
                                                                                                                                                   tCCAGGGAGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAtt  <  1:2092582/150‑1 (MQ=255)
                                                                                                                                                   tCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAtt  <  2:2035686/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
CGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACC‑GTTTT‑CTCCCTCTCCCTTCCAGGGAGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATT  >  NC_000913/3239464‑3239758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑