| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,976,321 | C→A | 6.5% | noncoding (65/82 nt) | omrB ← | sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,976,321 | 0 | C | A | 6.5% | 295.0 / 4.3 | 121 | noncoding (65/82 nt) | omrB | sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (58/53); new base A (2/7); total (60/61) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 122 total aligned reads displayed.
CAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAGGTTTGC > NC_000913/2976173‑2976467 | caatcaatACCTCTGGGATCTGGAGTGTGGTATGCACCAGGCCACAGCGCCAGCGGGGAGAGGGAAACGGATGAAGGGAAAGGCAACGAGGTGGGTTGGTTTTCGGGGAGTGTGAAGGATTGAAGCCCTGA‑AAAAAAAACATGCGCGTc > 2:1065246/1‑149 (MQ=255) tcaatACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTgc < 1:177778/149‑1 (MQ=255) aatACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCAgccc > 2:342714/1‑147 (MQ=255) aCCTCTGGGATCTAGATTGTGGTCTGCACGACGACTCTTAGCCAGCGAGATAACGCAAAGGAATGAAGGGAAATGCAACGAGGAGTGTAAATTTTCGGTTAAAGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAgg > 1:200065/1‑149 (MQ=255) ctctGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCt < 1:18158/149‑1 (MQ=255) ctctGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCt > 2:419255/1‑149 (MQ=255) tctGGTATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCAGATGCGCAggttt < 1:1051685/149‑4 (MQ=255) tctGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCTGCGAGAAAACGCAAAGTAATGAAGGGAAATGCAACGAGGTGGGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTg < 1:706064/149‑1 (MQ=255) aTCTTTATTGTGGTCTGCACGTCGACTCTTCGCCAGCTAGAATACGCAAAGGAATGAAGGGAAATGAAACGATGTGTGTAAATTTTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGAGCATCTGCGCAGGCTGGTGTaa < 2:1480102/149‑1 (MQ=255) aTCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTaa < 1:414178/149‑1 (MQ=255) aTCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTaa > 1:947179/1‑149 (MQ=255) attgtttgtTGTGTGCACGACGACTCTTCGCCAGCGCGAAAACGCAAAGGAAAGAAGTGAAATGCAACGAGGTGGGTAACTTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAAtt < 1:1062080/148‑1 (MQ=255) gATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAt < 2:655397/149‑1 (MQ=255) ttgttgGCTGCACGACGACTCTTCGCCAGCGAGAAACCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGGCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCAtgt < 1:354209/149‑1 (MQ=255) ttGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAACCGCAAAGGAATGAAGGGAAATGCAACGCGGTGGGTAAAGTGTCGGTTACTGTAACAGATTGATGCCCGGC‑AAAAAAAACCTGCCCATCTGCCCACGCTCGTGTAATTCCtgt > 2:1429465/1‑149 (MQ=255) gaggTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGc < 1:1300724/147‑1 (MQ=255) cTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGTAATGCAACGACGTGTGTAAATTGTCGGTTACTGTTACAGAATGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAAc < 2:1384348/149‑1 (MQ=255) cACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTTTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCg > 1:30106/1‑149 (MQ=255) cgacgaCTCTTCGCCAGCGAGAAAACGCAAAGGATTGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGaa < 1:877383/149‑1 (MQ=255) cgacTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGtt < 1:1095171/149‑1 (MQ=255) gacTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCTACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGCCCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTg > 1:332411/1‑149 (MQ=255) gacTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTTCGCAGGCTGGTGTAATTCATGTGCTCAACCCTAAGTTg > 1:1019766/1‑149 (MQ=255) ctctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGAc < 2:562041/149‑1 (MQ=255) ctctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAAGGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGAc < 2:1263629/149‑1 (MQ=255) tctTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACt > 1:1430701/1‑149 (MQ=255) gCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTAAACCCGAAGTTGACTTcccc > 1:1441193/1‑149 (MQ=255) gCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGAACGGC‑AAAAAAAACCTGCGCATATGCGCAGGCTGGAGTAATTCATGTGCTCAACCCGAAGTAGACTTCAcc > 1:84886/1‑149 (MQ=255) gCCAGCGAGAAAACGCAAAGGAATCAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCaac > 2:871485/1‑147 (MQ=255) ccAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTTCTCAACCCGAAGTTGACTTCACCt < 2:1207392/149‑1 (MQ=255) cAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACGGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATGCATGTGCTCACCCCGAAGGTGACTTCACCTa > 2:1059222/1‑149 (MQ=255) aGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGGTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTTTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTAt > 1:507067/1‑149 (MQ=255) aaCGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTTAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCCCAGGCTGGTGTAATTCATGTGCTCAACCCCAAGTTGACTTCACCTATCAATACct > 2:930734/1‑149 (MQ=255) cGCAACCGACTGACGGCAACTGCACCGAGGTGTCTAAATTGTCGGGTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACctct < 2:1083708/149‑1 (MQ=255) gCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTAAACCCGAAGTTGACTTCACCTATCAATACATCTg > 1:111010/1‑149 (MQ=255) aaaGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGTC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTggg < 1:217597/149‑1 (MQ=255) tgactGATGGGACATGCTACTCGTTATGTACATTGTCTGTTACTGTTACAGATTGATGAACTGA‑AAAAACAACCTCCGCTTCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGATGTTGACTTCACCTATCAATACCTCTGGGATc < 2:1180686/145‑1 (MQ=255) gAATGATGTGAAATTCAACGTGGTTTGTAAATTGTCGGGTACTGTTACAGATTGTTGAACTGC‑AAAAAAAACCTGCGCATATGAGCAGGCTGGTGTAATTCATGTGCTCAAGCCGAATTTGACTTCACCTATCAATACCTCTGGGATca < 2:701712/149‑1 (MQ=255) gAATGAAGGGAAATTAAACGATGTGTGTAAATTGTCGGTTACTGTTAAAGATTTATGACCGGC‑AAAAAAATCCTGCGCATCTGCGCAGGCTGGTGTATTTCATGTGCTCTACCCGTAGTTGACTTCACCTATCAATACCTCTGGGATca < 2:1430701/149‑1 (MQ=255) gAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTCCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATca > 1:1157365/1‑149 (MQ=255) aTGAAGGGAAATGCTACGATGTGGCTTAATTGTCTTTTAATGATACAGATGGAGGCACGTCAAAAAAAAACGTTCGCCTCTGCGCAGGCTTGTGTAATTCTTGTGCGCAACCAGAATTTGACTTCACCTATCAATACCTCTGGGATcac < 2:827265/149‑1 (MQ=255) gAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg < 1:419255/149‑1 (MQ=255) gAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAg < 1:1393203/149‑1 (MQ=255) aaTGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCa > 2:621375/1‑149 (MQ=255) aTGCAACGATGTGTTGAATTTGTCGGTTACTGTTACAGTTTCATGCCCTCC‑AAAAAACACCTGCGCAGCTGCTCATGCTGGTGTAAGTCTTCGTCTCAACCAGATTTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCaa < 1:861506/149‑1 (MQ=255) tGCAACGAGGTGTGTAAAATGTCGGGTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAAc < 1:929646/149‑1 (MQ=255) aaCGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTTTCAATAACACTGGGATCACCAATTTAGCAAACTg > 2:1559473/1‑149 (MQ=255) cGAGGTGTGTAAATTGTCGGTTACTGTTACATATTGATTACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGaa < 1:898118/149‑1 (MQ=255) cGAGCTGTGTAAATTGTCGGTTACTGTTACAGATTCATGACCTGA‑AAAAAAAACCTGCGCATCTGCGCAGGTTTGTGTAATTCATGTGCTCAACCCTACTATGACTTCATCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGaa < 2:200065/149‑1 (MQ=255) taGGTGTGTATATTGTCTGTTACTGTTACAGATTGATGACCTTC‑AAAAAAAACCTGCGCATATGCGCAGGCTTGAGTAATTCATGTTCTCAACCCGATGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAg < 1:1116792/148‑1 (MQ=255) caGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAg < 1:469674/148‑1 (MQ=255) ggTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATAAATACCTCTGGGATCACCACTTTAGCAACCTGAAGcc > 1:559973/1‑149 (MQ=255) gtgtgtAAATTGTCGGTTACTGTTACAGAGTGATGCCCGGC‑AAAAAAAACCTGCGCATCAGCGCCGGCTGGGGTAATTCATGTGCTCAACCCGAAGGAGACTTCCCCTATCAATACATCTGGGATAACCACTTTATCAACCTGAAGCCa > 2:839683/1‑149 (MQ=255) gtgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACATGCGCATCTGCGCAGGCTGGTGTAATTCATGTTATAAACCCGATGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCaaa < 2:460166/149‑1 (MQ=255) tgtAAATTGTCTGTTACTGTTACAGATTGATGACAGTC‑AAAAAAAACCTGCGCAGCTGCTCAGGCTGGTGTAATTCAAGTGCTATAGCAGATTTTTACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAAc < 2:241221/149‑1 (MQ=255) tgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCCCCTATCAATACCTCTGGGATCACCACTGTAGCAACCTGAAGCCAAAc > 2:20254/1‑149 (MQ=255) tgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGAAGGCTGGTGTAATTCATGTCCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAAc > 1:1200549/1‑149 (MQ=255) tgtAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACATGCGCATCTGCGCAGGCTTGTGTAATTCATGTGCTCAACCAGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAAc < 2:518408/149‑1 (MQ=255) tAAATTGTCGGTTACTGTTACAGATTGATGCCCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATAAATACCTCTGGGATCCCCACTTTAGCAACCTGAAGCCAAAAGc > 2:1472948/1‑149 (MQ=255) ttaggTTTCTGTTAAAGATTGAAGAACGTA‑AAAAATAACCTCCGCATATGCTCTTGCTTGTGTAAGTCATGTGATAAAGTAGATTTTTATATCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAg < 1:304564/146‑1 (MQ=255) tcttttACTTTTACAGATTGATGACCGGC‑TAAAAAAACTTTCGCATCTGCGCAGGATGGTGTAATTGATGTTATAAACAAGAATTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGc < 1:852613/145‑1 (MQ=255) tCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCCCCACTGTAGCAACCTGAAGCCAAACGCCGCCAGc > 2:669020/1‑149 (MQ=255) cGGTTACTGTTACAGATTGAGGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGAAATTCATGTGCGCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAACCGCCACCAGCg < 1:781643/149‑1 (MQ=255) gTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGt < 1:752401/149‑1 (MQ=255) gTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGt > 1:905261/1‑149 (MQ=255) ttACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTTATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCGGGGATCACCACTTTAGCAACCTGAAGCCAAACGACACCAGCGGTc > 2:1279056/1‑149 (MQ=255) tACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCa > 2:1525687/1‑149 (MQ=255) aCTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCCCCTATCAATACCTCTGGGATCACCACTGTAGCAACCTGAAGCCAAACGCCACCCGCGGTCaa > 2:1379746/1‑149 (MQ=255) aCTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCaa > 1:725854/1‑149 (MQ=255) ttACAGATTGATGACCGGC‑AAAAAATACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCGCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGc < 1:731214/149‑1 (MQ=255) ttACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGc > 1:551624/1‑149 (MQ=255) aCAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTTATTCATGTGCTCACCCCGAAGTTGCCTTCCCCTATCAATACCTCAGGGATCACCACGGTAGCAACCTGAAGCCAACCGCCACCCGCGGTCAATCGCaa > 2:287623/1‑149 (MQ=255) aCAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCCCCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCaa > 2:1099297/1‑149 (MQ=255) aCAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGCTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACGTATCAAAACCTCTGGGATCACCCCTATAGCAACCTGAAGCCAAGCGCCACCCGCGGTCAATCGCac > 1:133085/1‑148 (MQ=255) atgaCCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTTATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGttt < 1:1496372/149‑1 (MQ=255) ccGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCCCCACTTTAGCAACCTGACGCCAAACGCCACCAGCGGTCAATCGCCACAGCGTTTCGCa > 2:1124536/1‑149 (MQ=255) ccGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCa > 1:1334906/1‑149 (MQ=255) cGGC‑AAAAATAACCTGCTCATCTTCGCAGGCTGGTGTATTTCATGTGCTCACCCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCCGCGGTCAATCGCAACAGCGTTTCGCaa < 1:1483140/149‑1 (MQ=255) cGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCaa > 1:795004/1‑149 (MQ=255) ggC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTTGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCaaa < 1:1472948/149‑1 (MQ=255) ggC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCaaa > 2:509005/1‑149 (MQ=255) ggC‑AAAAAAAACCTGAGAATCTGCGGATGCTTGTGTAATTCATGTGTTCATCCCGTAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCaaa < 2:84886/149‑1 (MQ=255) gC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAg > 2:118746/1‑149 (MQ=255) gC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAg > 2:552430/1‑149 (MQ=255) aaaaaaaaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAgtg < 1:342714/149‑1 (MQ=255) aaaaaaaaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTAAATCGCAACCGCGTTTCGCAAAgtg > 2:1371469/1‑149 (MQ=255) aaaaaCCTGCGCATTAGCGCAGGCTGGTGAAATTCATGTGCTCAACCCGAACTTTAGTTCACCAATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTaa < 1:974124/149‑1 (MQ=255) aacaCCTGCGCATCTGCGCAGGCTTGAGTAATTCATGTGCGCAACCCGATGTTGAGTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAAc < 2:89296/146‑1 (MQ=255) aaaaCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAAc < 2:947179/149‑1 (MQ=255) gccTGCGCAGATGCGCAGGTTGGTGTAATTCATGTGCTCACCCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCaa > 1:641269/2‑149 (MQ=255) aCCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCaa > 1:4932/1‑149 (MQ=255) cTGCGCATATGGGCTGGCTGGAGTAATTCATGTTCTCAAGCAGAAGTTGACGTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAg < 2:86004/149‑1 (MQ=255) tGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCCACAGCGTTTCGCAAAGTGTAACCAAAgg > 1:61510/1‑149 (MQ=255) gcATCTGCGCAGGCTGGTGTACTTCATGTGCTCACCCCGAATTTGACTTCACCTATCAATACCTCTGGGAGCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAGGttt < 1:1065246/149‑1 (MQ=255) cATCTGCTCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCAACTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAGGTTTg < 1:930734/149‑1 (MQ=255) cATCTGCGCAGGCTGGTTTAATTGATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAGGTTTg < 1:1059222/149‑1 (MQ=255) cATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAGGTTTg < 2:30106/149‑1 (MQ=255) cATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAGGTTTg < 1:272299/149‑1 (MQ=255) cATATGCGCAGGCTGGTGTAATGCATGTGCTAAACCCGAATTTGACATCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTAAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAGGTTTg < 2:438401/149‑1 (MQ=255) aTCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAGGTTTGc > 2:1327405/1‑149 (MQ=255) aTCTGCGAAGGCTGGTGTAATTCATGTGCTAAACCCTAAGTAGACTACAACTATCAGTACCTCTGGGATCACCACTTTAGCAACCTGAATCCATACGACAAAAGAGTTCAATCGCAACTGCGATTCGATAAGTTTAAAGAAATGATTGc > 2:1044907/1‑149 (MQ=255) | CAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGTGTAAATTGTCGGTTACTGTTACAGATTGATGACCGGC‑AAAAAAAACCTGCGCATCTGCGCAGGCTGGTGTAATTCATGTGCTCAACCCGAAGTTGACTTCACCTATCAATACCTCTGGGATCACCACTTTAGCAACCTGAAGCCAAACGCCACCAGCGGTCAATCGCAACAGCGTTTCGCAAAGTGTAACCAAAGGTTTGC > NC_000913/2976173‑2976467 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |