| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,976,118 | T→G | 5.7% | noncoding (72/88 nt) | omrA ← | sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,976,118 | 0 | T | G | 5.7% | 860.8 / 27.7 | 288 | noncoding (72/88 nt) | omrA | sRNA antisense regulator downregulates OM proteins and curli; positively regulated by OmpR/EnvZ, Hfq‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (127/142); new base G (7/12); total (134/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 290 total aligned reads displayed.
CGCGATACAAAACACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGT > NC_000913/2975969‑2976266 | cgcgaTACAAAACACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGTGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCAt < 1:3896313/150‑1 (MQ=255) gcgaTACAAAACACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATc > 1:2623289/1‑150 (MQ=255) gcgaTACAAAACACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATc > 2:449411/1‑150 (MQ=255) gcgaTACAAAACACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAAACTGCGCATc > 2:2544195/1‑150 (MQ=255) gaTACAAAACACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCcg > 1:1625406/1‑150 (MQ=255) aTACAAAACACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCcgc < 2:1294057/150‑1 (MQ=255) aaaaCACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGATTGGTGGGAGATTACACGATATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAg < 1:3270944/150‑1 (MQ=255) aaaaCACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATTGATTGAGATTAAACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGAG‑AAAAAAAACCTGCGCTTCCGCGCAg > 2:3217953/1‑150 (MQ=255) aaaCACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAgg > 1:3245075/1‑150 (MQ=255) aaaCACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAgg > 2:1089929/1‑150 (MQ=255) aaaCACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAgg < 2:1374867/150‑1 (MQ=255) aaaCACGGCACAAATTTCGAAAAAAGATAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAgg < 1:1541117/150‑1 (MQ=255) aaCACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGt > 1:1154908/1‑150 (MQ=255) ctctgCACAAATTTCTAAAAAAGATAAATATCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCTATTTTAGGTAGATTACACGATATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCGGATGCGCAGGttt < 1:2257182/146‑2 (MQ=255) cacgtaacaAATTTCTAAAAAAGCTAAAAAGAATACCAACTCCCTTTGCTCTGATTCAGTAAACGGTATTGGTGGGAGATTACACTAGATAAATACCGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCGGATGCGCAGGttt < 1:4157506/144‑2 (MQ=255) cacGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTg < 2:2819034/150‑1 (MQ=255) acGGCACACATTTCGAAAAAAGCGAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCAGCCGCGCCGGTTgg > 2:1238941/1‑150 (MQ=255) cGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCGGATGCGCAGGttttt < 2:3118360/150‑4 (MQ=255) cGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGt < 2:3567578/150‑1 (MQ=255) cGGCAAAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCATTAAAAGCGAATGGAGGGTGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTATGTGCG‑AAAAAAAACCTGCGCGGATGCGCAGGttttt < 2:1379574/150‑4 (MQ=255) caaaaaTTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCa < 1:3011556/147‑1 (MQ=255) acaAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCaa < 2:785258/150‑1 (MQ=255) aTTTCGAAAAAATCTAAAAAGCATTCCAACTCCCTTTGATCTTATTCAGTAAAAGATAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAgaga < 1:3410360/150‑1 (MQ=255) tttCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGAc > 1:1385594/1‑150 (MQ=255) tCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCATTAAAAGCGAATGGAGGTAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑g < 1:3375374/150‑1 (MQ=255) gAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGAGACAGTAAATTAGGTGCG‑AAAAAAAAACTGCGCATCCGCGCAGGTTGGTGCAAgagaaacgg > 2:2987281/1‑145 (MQ=255) aaaaaGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTa > 1:473342/1‑150 (MQ=255) aaaaGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACATGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTAc > 2:1502593/1‑150 (MQ=255) cTAAAAATCATTCCAACTCCCTTTGCTCTGATTCTGTAAAAGCGATTGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAaga < 1:831592/150‑1 (MQ=255) tAAAACGCATTCCAACTCCCTTTGCTCTGATTCATTAAAAGCGAATGGTGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAagag < 1:1787759/150‑1 (MQ=255) tAAAAAGCATTCCAACTCCCTTTGCTCTGATTCTGTAAAAGCGAATGGTGGGTGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAagag < 1:844580/150‑1 (MQ=255) tAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAagag > 1:1231254/1‑150 (MQ=255) tAAAAAGCATTCCAACTCCCTTTGCTATGATTAAGTAAAAGCGAATGGAGGGAGATTACACGATATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAagag < 1:2024168/150‑1 (MQ=255) tAAAAAGAATACCAACTCCCTTTGCTCTTATTCAGTAAAAGCGATTGGTGGTATTTTACACGATATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAagag < 1:859848/150‑1 (MQ=255) aaaaGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCg > 1:3136661/1‑150 (MQ=255) aaaaGCATTCCAACTCCCTTTGCTATGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCACGAGACA‑GGGTACGAAGAGCg > 1:2271309/1‑150 (MQ=255) caGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTCACTTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCGGGTGGGGGCACGAGACA‑GGGTACGAAGCGCGtc > 2:2459828/2‑149 (MQ=255) aGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTAc > 1:875093/1‑150 (MQ=255) gCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTAcc < 1:3348072/150‑1 (MQ=255) ttCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGaa > 1:3721521/1‑150 (MQ=255) ccAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGTGGTAGATTACACGAGATAAAGACCGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCCTCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGaata < 1:366357/150‑1 (MQ=255) ccAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGaata < 1:4279115/150‑1 (MQ=255) cccTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCa < 2:2777454/150‑1 (MQ=255) cTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCAcc < 1:2822555/150‑1 (MQ=255) cTTTGCTCTGAGTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCAcc < 2:1911317/150‑1 (MQ=255) tttGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACca > 1:952109/1‑150 (MQ=255) gCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACcaatc < 1:2347222/150‑1 (MQ=255) tctGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACcaatcaa > 1:66773/1‑150 (MQ=255) tctGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACcaatcaa > 2:515026/1‑150 (MQ=255) ctGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACcaatcaat < 2:566002/150‑1 (MQ=255) gATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGGCAATTAGGTGCG‑AAAAAAAACCTGCGCAGCCGCGCAGGATGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATCATCTCACCCATCAATAc > 2:3910597/1‑150 (MQ=255) tCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACctc > 1:4062980/1‑150 (MQ=255) gTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTgg > 1:647427/1‑150 (MQ=255) gTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTgg < 2:3861178/150‑1 (MQ=255) gTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATGAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTgg < 2:3263253/150‑1 (MQ=255) tAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTggg > 1:2532269/1‑150 (MQ=255) aatgCGAATGGAGGGAGATTACACGAGATAAACAACGCGAGCGACAGTATATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTTCCGAATAATCTCACCAATCAATACCTCTGGGAt < 2:2719474/147‑1 (MQ=255) aGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCt < 2:315697/150‑1 (MQ=255) gCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCtt < 1:2954874/150‑1 (MQ=255) aTGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACATGGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGAt < 2:4055946/150‑1 (MQ=255) gagggagATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATtgtg < 2:1793204/150‑1 (MQ=255) agggagATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTgg < 1:525248/150‑1 (MQ=255) gggagATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGt < 2:1645672/150‑1 (MQ=255) ggagATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTc > 2:4233592/1‑150 (MQ=255) agaTTACACGAGATAACGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTg < 1:1912324/150‑1 (MQ=255) ttACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCac > 2:904959/1‑150 (MQ=255) acacGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCacga > 2:1163778/1‑150 (MQ=255) acGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTgg > 2:2304347/1‑139 (MQ=255) agaTAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGAct < 1:265010/150‑1 (MQ=255) agaTAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGAct < 2:3136665/150‑1 (MQ=255) aaaGACCGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATCCCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTc < 2:1833901/150‑1 (MQ=255) aGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGTATCTTGATTGTGGTCTGCACGACGACTCTTCGc > 2:65029/1‑150 (MQ=255) aCGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCAGCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAg < 2:415421/150‑1 (MQ=255) gcgagcgaCAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCg > 2:2656504/1‑150 (MQ=255) gcgagcgaCAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCg > 2:1344466/1‑150 (MQ=255) gagcgaCAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCgag < 2:1736611/150‑1 (MQ=255) gagcgaCAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCgag > 1:1060951/1‑150 (MQ=255) gagcgaCAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCgag > 1:1060946/1‑150 (MQ=255) gagcgaCAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCgag > 2:3790162/1‑150 (MQ=255) taaCAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGaaa > 2:4031603/3‑150 (MQ=255) gaCAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGaaaa < 1:3564862/150‑1 (MQ=255) aCAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAAc < 2:1395216/150‑1 (MQ=255) aGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGc > 1:2227332/1‑150 (MQ=255) aGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGc > 1:3192169/1‑150 (MQ=255) aGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGc > 2:884568/1‑150 (MQ=255) aTTAGGTGCGAAAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAg > 1:2230479/1‑150 (MQ=255) ttAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGa < 2:3820282/150‑1 (MQ=255) tAGGTGCG‑AAAAAAAACCTGCGCAGCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGaa < 2:2043181/150‑1 (MQ=255) tGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGaa < 1:289340/150‑1 (MQ=255) tGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGaa < 1:1413044/150‑1 (MQ=255) tGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGaa < 2:2190674/150‑1 (MQ=255) cG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAgg < 2:1625388/150‑1 (MQ=255) g‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAggg > 2:2603407/1‑150 (MQ=255) caaCCTGCGCGGATGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGc > 2:1014634/2‑150 (MQ=255) aCCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCaa < 1:2671891/150‑1 (MQ=255) aCCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCaa < 1:58982/150‑1 (MQ=255) gcATCCGCGCAGGTTGGTGCTAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGgt < 2:2365117/150‑1 (MQ=255) gcATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGgt < 1:1276915/150‑1 (MQ=255) cATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGgtg > 1:1827612/1‑150 (MQ=255) cATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGgtg > 1:1827594/1‑150 (MQ=255) | CGCGATACAAAACACGGCACAAATTTCGAAAAAAGCTAAAAAGCATTCCAACTCCCTTTGCTCTGATTCAGTAAAAGCGAATGGAGGGAGATTACACGAGATAAAGAACGCGAGCGACAGTAAATTAGGTGCG‑AAAAAAAACCTGCGCATCCGCGCAGGTTGGTGCAAGAGACA‑GGGTACGAAGAGCGTACCGAATAATCTCACCAATCAATACCTCTGGGATCTTGATTGTGGTCTGCACGACGACTCTTCGCCAGCGAGAAAACGCAAAGGAATGAAGGGAAATGCAACGAGGTGT > NC_000913/2975969‑2976266 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |