| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,101 | A→C | 18.6% | intergenic (+84/‑114) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,101 | 0 | A | C | 18.6% | 127.2 / 2.5 | 90 | intergenic (+84/‑114) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (36/33); new base C (8/10); total (47/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATT > NC_000913/3780953‑3781247 | tGCAGGGGCCGTGTAAAGAGTTGCCTGCGGCAATGGCTCCCATGGCGAAAGGGAATGCGGAATATTCTTTTGCGCCCCCTCAACTTAACCCTCTCCGTCAGGGAGAGGTGACCGTTCGGAGCTGTATG‑TACTCCCTCACTCTGAAACGa < 2:647611/149‑1 (MQ=255)ggCAGGGGCTGGGTAAAGAGTGGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGa < 2:996758/148‑1 (MQ=255) gCAGGGGCTGGGTAAAGAGTTGCCTGCGGAACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCCTCGCTGTATG‑TACTCCCTCACTCTGAACCGac > 2:602701/1‑149 (MQ=255) cAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGaca < 1:827034/149‑1 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGacac < 1:775272/149‑1 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTGGGCGCTGTATG‑TACTCCCTCACTCTGAAACGCCAcc > 2:442951/1‑149 (MQ=255) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATCCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACGCttttt < 1:211543/149‑1 (MQ=255) aaGAGGTGCCTGAGGCACTGGCCCCCATGGCGAAAGGGAATGCGGCATCGTCGTTTGCGCCCGCTATCCGTACCCGTCTCCCTCCGGGAGTGGGGACCGTTCGGCGCTGTATG‑TCCTCCCTCACGCTGAAACGACACCGCACTCttttt < 1:851617/149‑1 (MQ=255) tgTTTCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATACGCGTTTGCGCCCCCTCAGCCTAACCCTCTCCCTCAGGGAGAGGGGAACGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtc < 2:174668/148‑1 (MQ=255) ggtGCCGGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtct < 2:564301/147‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCACTCACTCTGAAACGACACCGCACTCTTTTTTtatc > 2:138601/1‑149 (MQ=255) tggCCTGCGGCACTGGCTCGCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCACGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtctc < 1:538678/147‑1 (MQ=255) gtGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTAGG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtctc < 1:543089/148‑1 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGCGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTcc < 2:797983/149‑1 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTcc < 2:154058/149‑1 (MQ=255) gCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCGCCCTCGGGGAGAGGGGCCCGTTCGGGGCGGGCTG‑TACACCCGCACTCTGCAACGGCACCGGCCGCTTTTGTTCGCCCgcgc > 1:668999/1‑149 (MQ=255) gCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGc < 2:91650/149‑1 (MQ=255) gCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCACTCCCTCAGGGAGAGCGGAACGATCGGCGCTGTATG‑TACAGCCGCCCTCTGAAACGACACCCCCCTCTATTTTACACCCACGc > 2:65287/1‑149 (MQ=255) aCTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAAACCTATCCCTCAGGGAGAGGGGTCCGGTCGGCGCTGTATG‑TACTGCATCACTCAGCACCGCCCCCGCACTCGTTTTTTCTCCCTCGcccgac > 2:56917/1‑146 (MQ=255) gcacccATGGCGATAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTCACCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGATACGACACCGCACTCTTTTTATCTCCCTCGCCCCTCCggg < 1:233548/146‑1 (MQ=255) gCTGCCTTGGCGAACGGGAATGGGGCATAGTCGTTTGCGCGCCCTCTCCCTAACCCTCTCCCTCATGTAGAGGGGAGCGGTCGGCGCTGTAAG‑GACTCCCTCACTCTGTAACGAAACGGCTCTCTTTTTTTCTCCCTCGCCCCTCCgtg < 1:818653/149‑3 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGGCCGTTGGGGGGTGTTTG‑TTCTGCCGCACAGGGATACGCCCCCGCACTCTTTTTTTGGCCCGCGCCCCTACggg > 2:217121/1‑149 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCTCACCCTAAGGGTGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGAACCCGCACTATTTTTTTATGCCTCGCCCCACCGGGgag > 2:425448/1‑149 (MQ=255) cATGGCGAAAGGGAATGCGGCATAGTCGATTGCGCCCCCTCACCCGAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag < 1:563304/149‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGGTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAgg < 1:483687/149‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCAAACCCAAACCCACTCCCACAGGGAGGGGGGCCCGGTGGGCGCGGTTTG‑GACTGCCAGACTCAGAAACGGCACCCGACGGGTTTTTTAGACCAAGCCCCTCCggggcgggg > 2:805433/1‑144 (MQ=255) tGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg < 2:622511/149‑1 (MQ=255) tGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TAATCCCTCACTCTGCAACGACACCGCCCGCTTTATTTATCCCTCGCCCCGCCGGGGAGAggg > 1:1006231/1‑149 (MQ=255) ggagAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCACCCTAAAGGAGAGGGGCCCGTTCGGCCCTGTATG‑TACTCCCTCAAACTGAAACGACCCCGCACGATATTTTTCTCCCTCCCCACACCGGGGAGAGGGc > 2:621909/4‑149 (MQ=255) ggCGAACGGGACGGCGGCAGAGGCGTTTGCGCCCCCTCACCCTAACCCACGCCCTCAGGGAGAGGGGACCGTTCGGCGCTGGATG‑TACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGc < 1:722676/149‑1 (MQ=255) cGAAAGGGAATGCGGCTTAGTCGGTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCGTCACTCTGAAACGACACCGCACTGTTTTTATCGCCCACGCCCCTCCGGGGAGAGGGCCg < 1:904046/149‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCGGGATG‑TACTCCCTCACGGTGAAACGGCACCGCACGCGTTTTTTCTCCCTCGCCCCGCCGGGGGGAGGGCCggg > 1:13489/1‑149 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 1:150385/149‑1 (MQ=255) aaaGGCAAGGCGGCATAGACGTTGGCGCCCCCTCACCCACCCCCTCTCCCACAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 1:570438/149‑1 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCAAACCCACTCCCACAGGGTGAGGGGGGCGGTGGGCGGGGTTTG‑GACGGCCTCACACATCAACGACACCGCCCACGTTTTTTATCCCTACACCCTCCCGGGGGcggggcgggg > 2:827190/1‑149 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCCCGCTTTTTTTCTCCCACGCCCCGCCGGGGAGAGGGCCGGGGTgc > 2:629606/1‑148 (MQ=255) gAATGCGGCATTGGCGTTTGCGCCCCCTCACCCTACCCCACTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 1:942344/149‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCACCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 1:928844/149‑1 (MQ=255) aaTGCGGCATAGGCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCTGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:621534/149‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCTCCCCCGAACCCTCTCCCTCAGGGAGAGGGGCCCGTTCGGCGCTGGATG‑TACTCCCTCACTCTGAAACGACACCGCAGTCGTTTTTTCTCCCTCGCCCCTCCGGGGGGAGGGCCCGGGGGAGGGGaaa > 2:625183/1‑149 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCGCTCCCTCAGGGAGAGGGGACCGTGCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaaa < 2:345335/149‑1 (MQ=255) aTAGTCGTTGGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGCCGGGGTGAGGGGAAAAgg < 2:388489/149‑1 (MQ=255) tCGTTTGCGCCCCCTCACCCTAACCCTCTCCCGCAGGGAGAGGGGACCGTTCGGGGCGGTATG‑TACTCCCTCCCGCTGAAACGCCGCCGCACTCGTTTTTTCACCCTCGCCCCGCCGGGGAGCGGGCCGGGGTGGGGGGTAAAGGCCGc > 2:252869/1‑149 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCa > 2:26158/1‑149 (MQ=255) ccccccTCCCGCTCAGCCACCCCGTCGGGGCGAGGGGACGGTTCGTCGCTGTATT‑TACTCCATCACTCTGAAAGCACACCGCATTCTTTTTTTCTCCCTCGCCCCTCCGGGGTTAGGGCCGGGGTTCGGGGAAAAGGCCGCACTGCTCa < 2:199192/148‑1 (MQ=255) cccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGGACTGCTCAc > 1:24109/1‑149 (MQ=255) cccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAc > 1:20439/1‑149 (MQ=255) tCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtt > 1:964262/1‑149 (MQ=255) aCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtttt > 2:305218/1‑149 (MQ=255) aCCCTAACCCTCACCCTCCGGGAGTGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGTAAAAGGCCGCACTGCTCACCAAtttt < 2:964262/149‑1 (MQ=255) cccTCACCCTCTCCCCCCGGGAGAGGGGTCCGTGCGGCGCGGTATG‑TACACCCACCCTCTCAACCCACACCCCCCTCTTTTTTTCTCCCTCCCCCCGCCGGGGAGCGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTc < 2:74884/149‑1 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt > 1:963818/1‑149 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCGCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGCGGGCCGGGGTGAGGGGAAAACGCCGCACTGCTCACCCATTTTCt > 1:871616/1‑149 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCGGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt > 1:178209/1‑149 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGATGTATG‑TACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTATCTCCCTCGCCCATCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCCCGGCGCACCAATTTTCt > 2:212064/1‑149 (MQ=255) cacaCCCGCCCCCTCCGGGAGCGGGGACCGGTCGGCGCTGTATG‑TACACCCTCACTCGGACACCCCCCCGCCCTCTTTTTTTCCCCCACCCCCCTCGGGGGAGAGGGCCGGGGGGCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg < 1:998289/146‑1 (MQ=255) caaccccTCTCCCTCCGGGTTTGGGGACCGTTCGGGGCTTTTTG‑TACTCCCTCCCACTGAAACGCCACCTCACTTTTTTTTTCTCCCTCGCCCCTCCGGGGAGTGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg < 2:57967/145‑1 (MQ=255) caaaCCCTCCCCCACAGGCTGAGGGGACCGTCCGCCGCTGTTTG‑ACCTCCCACACTCTGAACCGACCCCCCACTCTTTTTTTCACCCTCGCCCCGCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg < 2:949679/147‑1 (MQ=255) tAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGTAAAGGCCGCACTGCTCCCCAATTTTCTGc > 2:237421/1‑149 (MQ=255) cccTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATC‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTAt < 1:731480/149‑1 (MQ=255) ccTCTCCCTCAGGGTGTGGGGACCGTTCGGCGCTGTATG‑AACTCCCTCACTCTTAAACTACACCGAACTCTTTTTTTATCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGTTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc < 2:20439/149‑1 (MQ=255) ccTCTCCCTCAGGGTGAGGGGTCGTTTCGGGGCTGTATG‑TACTCCCTAAATCTTAAACGACACCGAAATCTTTTTTTCTCCCTCGCCCCTCCGGGGAGTGGGCCGGGGTGTGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc < 2:24109/149‑1 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACCCCGCCCTCTGTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGCGGATCGGCCGCACTGGTCACCAAGTTTCTGCTATc > 1:409990/1‑149 (MQ=255) ctctCGCTCAGGGAGAGGGGACCGTTCGGCGCTGTAGG‑TACTCCCTCACTCTGAAACGCGCCCGCCCTGTTTTTTTCTACCTCGCCCCTCCGGGGCGAGGGCCGGGGTGAGGGGAAAGGGCCGCCCTGCTCACCAAGTTTCTGCTATcc > 1:114076/1‑149 (MQ=255) cacccTCCGGGCGTGGGGACCGTTGGGGGCTGTATT‑TACTCCCTCACTTTTAAACCACACCGCACTATTTTTTTCTCCCACGCCCCTCCGGGGAGTGGGCCGGGGTGCGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg < 2:453361/147‑1 (MQ=255) ctggtgagGGGACCGGTCGGCGCTG‑ATGCTCCTCCCTCTCCCTTACACGCCCCCGCACTGTTTTTAGCTCCCGCGCCCCCCCGGGGTGAGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGc < 1:953428/144‑1 (MQ=255) ggAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGCGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc > 1:471016/1‑149 (MQ=255) gtgACCGTTCGGCGCTGTATG‑AACTCCATAACTTTCAAACTACACCGCACATTTTTTTACTCCCTCGCCCCCCCGGGGAGTGGGCCGGGGTTAGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg < 1:138601/147‑1 (MQ=255) gggACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGCCACCGCACTCTTATTTTCTCCCTCGCCCCTCCGGGGATAGGGCCGTGGGGAGGGGTAAAGGCCGCAATGCTCACCAATTTTGTGCTATCCTGCACCCGCACAAAggg > 2:668836/1‑149 (MQ=255) gggACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg > 1:210227/1‑149 (MQ=255) gggACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg > 1:217526/1‑149 (MQ=255) ggACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGAAACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGTGAAAACGCCGCACTCATCGCCAATTTTCTGATATCCTGCCCCACCACTAAgggg > 1:283494/1‑149 (MQ=255) ggACCGTGCGGCGCTGTATG‑AACTCCCTCCCTCTGAAACGACCCCGCACCCTTTTTTTCTCCCGCGCCCCGCCGGGGCGAGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg < 1:631354/149‑1 (MQ=255) gACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTATggggg > 2:69355/1‑149 (MQ=255) gACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg > 2:870328/1‑149 (MQ=255) aCCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc > 2:657219/1‑149 (MQ=255) ccGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTTCTCACAAATTTTCTGCTATCCTGCCCCCGCACGAAGGGGGCa > 2:957499/1‑149 (MQ=255) cGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAg > 2:740267/1‑149 (MQ=255) cggcggGGTATG‑TCCTCCCTCCCACTCAAACCCCCCCGCACACTTTTTTTCTCCCGCCCCCCGCCGGGGAGCGGGCCGGGGTGAGGGGACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATg < 2:994136/149‑1 (MQ=255) gcgcTGTATG‑TACTCCCTCACTCTGAAACGACACCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt < 2:178209/149‑1 (MQ=255) gcTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCACTCCGGGGAGAGGGCCGGGTTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTATGCTATCCTGCCCACGCAGTAAGGGGGCAGTATGCTaa > 2:838419/1‑149 (MQ=255) gcTGTAAG‑TACTCCCTCACGCTGAAACGACACCGCACTCGTTATTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGCGTGAGGGGAACCGGCCGCCCTCCTCCCCAATTTTCTGCTATCCTGCCCCCGCTCTTAGGGGGCAGGATGCTaa > 2:808152/1‑149 (MQ=255) cTGTATG‑TACTCCCTCACTCTCAACCCCCCCCCCACTCTTTTTTTCCCCCTCCCCCCCCGGGGGAGTGGGCGGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa < 1:981647/149‑1 (MQ=255) tccccccTCACTCTGAAACGACACCCCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa < 1:442951/145‑1 (MQ=255) ccccccCACTCTGAACGGCCACCGCACTCTTTTTTGCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGTTGTGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt < 2:975393/147‑1 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt > 1:620128/1‑149 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCGTTTTTTCTCACTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTACCCAATTTTCTGATATCATGCCCACGCACTAAGGTGGCAGTATGCTATACATCGGACtt > 2:923228/1‑149 (MQ=255) cccccctctGAAAGTCCCCCGCACTCTTTTTTTCTCCCGCGCCCCCCGGGGTTGTGGGCCGGGGGGCGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa < 2:529792/144‑1 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCTGGGAGAGGCCCGGGGTGAGGGGAAAAGGCCGCACTCCTCCCCAAGTTTCTGCTATCCTGCCCCCGCACGAAGGGGGCAGTATGCTAAACATCGTACttaa > 1:120294/1‑147 (MQ=255) cTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGTAAAGGCCGCACTGCTGACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAGGCTAAACCTGGTACTTTAc > 2:232239/1‑149 (MQ=255) agaCTCTGAAACGCCACCGCCCTGTTTTTTGCACCCTCGCCCCTCCGGGGCGAGGGCGGGGGTTCGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg < 1:957499/147‑1 (MQ=255) ctctAAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc > 2:397947/1‑149 (MQ=255) tGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGTGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg > 1:305853/1‑149 (MQ=255) aaCGACACCCCACTCTTTTTTTCTCCCTCGCCCCTCAGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACATTACGAACCAGaat > 2:119099/1‑148 (MQ=255) cGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAtt > 1:880562/1‑149 (MQ=255) | TGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATG‑TACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATT > NC_000913/3780953‑3781247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |