| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,519,313 | C→A | 8.2% | intergenic (+89/+25) | insB1 → / ← yjhU | IS1 transposase B;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related/putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,519,313 | 0 | C | A | 8.2% | 202.6 / 3.5 | 87 | intergenic (+89/+25) | insB1/yjhU | IS1 transposase B;IS, phage, Tn; Transposon‑related functions; extrachromosomal; transposon related/putative DNA‑binding transcriptional regulator; KpLE2 phage‑like element |
| Reads supporting (aligned to +/- strand): ref base C (42/37); new base A (6/2); total (48/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.88e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAA > NC_000913/4519166‑4519459 | cGGTGGAGTTTCATGACAAGGTCAACGGGCATTATCTGAACATAAAACACAATCAGTAAGTTGGAGTGATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCt < 2:1027309/149‑1 (MQ=255) gTGGAGTTGCATGACAAGGTCATCGGGCATTAACTGAACATAAAACACTATCAGTAAGTTGGAGTAATTACCGCCCATTTTTATTTCATACATTGTGGGTTTTGTTCTTATTATCGCCGATAAGCAATA‑AAATCCTGCACAATATATAc > 2:1027735/1‑149 (MQ=255) aGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATgg < 1:76811/149‑1 (MQ=255) gCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCa > 1:182661/1‑149 (MQ=255) cATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAg > 2:179329/1‑149 (MQ=255) aaTGACAAGGTCATCGGGCATTATATGACCATAAAACACTAACAGTAAGTAGGAGTCATTACCGACCATGTTTATTTCATACATTTTGGGTATTGTTCTTAATATCGCCGCTAATCAATA‑AAATCCTGCCCCATCTAGATATGGGGCAg < 2:261183/148‑1 (MQ=255) aGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCa < 1:157445/149‑1 (MQ=255) aGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATAGCTACATCGGGCAGTTGTTCa < 2:53091/149‑1 (MQ=255) gTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCAtt > 2:761853/1‑149 (MQ=255) gcATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTc < 1:797819/148‑1 (MQ=255) tCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCttt < 2:377625/149‑1 (MQ=255) gggCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTa < 1:308867/149‑1 (MQ=255) gaTTATCTGAACATAAATAACTATCAGTAAGTTGTAGTCATTACCGACTATGTTTTTTTTTTAAATTTTGTGTATTGTTCTTATTATTTCAGATAATGAATT‑AAATACTGCCCCATATATACATGGGGCAGTTGTTCATTCTTTTAgtg < 2:558772/148‑1 (MQ=255) cATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAgtg > 1:546986/1‑149 (MQ=255) ttATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCATTA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGtgtg > 1:826023/1‑149 (MQ=255) tCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTa > 1:981229/1‑149 (MQ=255) gAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAAtt > 2:25287/1‑149 (MQ=255) aaCATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTc < 2:546986/149‑1 (MQ=255) cATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTcac > 2:953333/1‑149 (MQ=255) cATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTATATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCAATATCTACATGGGGCATTTGTTCATTCTTTTAGTGTGGTAATTcac > 2:657415/1‑149 (MQ=255) aTAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTcaca > 2:660001/1‑149 (MQ=255) aTAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTCGTAATTcaca > 2:865156/1‑149 (MQ=255) aaaCACTATCAGTAAGTGGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGc < 1:904850/149‑1 (MQ=255) aaCACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGcc > 1:820014/1‑149 (MQ=255) aaCACTATCAGTAAGTTGGAGTCATTACCGACAATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGACCCATATCTACATGGGGCAGTTTTTCATTCTTTTAGTTTGGTAATTCACAcccc > 1:534072/1‑149 (MQ=255) acTATCAGTAAGTTGGAGTCATTACCGAACATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGGCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGc < 2:329556/149‑1 (MQ=255) cTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCa < 1:325558/149‑1 (MQ=255) tATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCACATATCTACATGTTGCAGTTCTTCATTCTTTTAGTGTGGTAATTCACACGccctgaa > 2:429867/1‑144 (MQ=255) gTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCTTATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAAct > 1:464901/1‑149 (MQ=255) tAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTGTTTTAGTGTGGTAATTCACACGCCAGCAAAAActc > 2:29855/1‑149 (MQ=255) tAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAActc > 2:959137/1‑149 (MQ=255) tAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAActa > 1:653747/1‑148 (MQ=255) tAAGTTGGAGTAATTACCGACCATGTTTTTTTCATAGATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAActc < 2:182661/149‑1 (MQ=255) aGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTg > 2:143412/1‑149 (MQ=255) tGGAGTCAGTACCGACCATGTTTAATTCATACAATCTGTGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCAGATCGACATGCTCCACTAGTTAATTCTTTTACTGTGGTAATTCACACGCCAGAAAAAACTCTCCCg > 2:182340/1‑149 (MQ=255) ggAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGt > 1:659351/1‑149 (MQ=255) gTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTcc > 2:40762/1‑149 (MQ=255) cATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCtt < 1:270805/149‑1 (MQ=255) ttACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTTATTAACACGCCAGCAAAAGCTCTGCCGTTCCTtca > 1:80690/1‑149 (MQ=255) aCCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTtcatc < 1:111625/149‑1 (MQ=255) ccGACCATGTTTATTTCATACATAGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCAGCCCAATATATACATGGGGCAGTTGTTCATTCTTTAAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCGTtcatca > 2:279850/1‑149 (MQ=255) cGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCGATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGACGTTCCTTCATcaa > 1:445061/1‑149 (MQ=255) cGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATcaa > 1:1014964/1‑149 (MQ=255) ccATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAAACCTGCCCCATATCTACATGGGGCAGTTGTTCATTCATTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATcaacaa > 2:171174/1‑149 (MQ=255) atttttATTTCATAAATTGTGGGTATTGTTATTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATc < 2:740697/146‑1 (MQ=255) gTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAg < 1:909148/149‑1 (MQ=255) ttATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGt < 2:630646/149‑1 (MQ=255) ttCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGt < 2:1027197/149‑1 (MQ=255) aTACATTGTGGGTATTGTTCTTAATATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGAc < 2:158470/149‑1 (MQ=255) aTTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACatat > 2:554351/1‑149 (MQ=255) ggTATTGTTCTTATTATCGCCGCTAATTAATA‑AAATCCTGCCCCTTTTCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCTCACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTccc < 1:850727/149‑1 (MQ=255) gTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCca < 1:330558/149‑1 (MQ=255) tATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCcag > 1:338796/1‑149 (MQ=255) ttGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCcagca > 1:763109/1‑149 (MQ=255) tGTTCTTATTATCGTCGCAAATCAATA‑AAATCCTGCCCCATATCTCCATGGGGCAGTTGATCATTCTTTTAGTGTGGTAAATCACACGCCAGCAAAAACTCTGCCGTTCCATCATCAACAATCAGGTCCGTGACATATCCTCCcagcag < 2:241714/149‑1 (MQ=255) tGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCcagcag < 1:906719/149‑1 (MQ=255) gTTCTTATTTTCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAgg > 2:524360/1‑149 (MQ=255) gTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCGTTAATCAACAATCAGGTCCGTGACATATCCTCCCAGCAgg > 1:363020/1‑149 (MQ=255) tcttatCGCCGCAAAT‑AATATAAATCCTGCCCCTTCTCTCCATGGTGCAGTGTTTCATTCTATTAGTGTGGTATTTCACACGCAAGCCAAAACTCTGCCGGTCCTTCATCAACAATCAGGTCCGTGACAAATCCTCCCAGCAGGGCAcc < 2:692216/147‑1 (MQ=255) tattatCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCATTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCAcc > 1:463814/1‑149 (MQ=255) attatCGCAGCTAATCAATA‑AAATCCTTCCCCATATCTACATGTGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCAccc < 1:4221/149‑1 (MQ=255) atCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTTGTAATTCACACGCCAGCAAAACCTCTGCCGTTCCTTCATCAACAATCATGTCCGTGCCATATCCTCCCAGCAGGGCACCCAAc > 2:829941/1‑149 (MQ=255) acgccgcTAATCAATA‑AAATCCTGCCCCATAACTACATGGGGCACTTGTTCATTCTTTTAGTGAGGTAATTCTCACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCTGATCCGAGACATATCCACCCAGCAGGGCACCCATCg > 1:441808/2‑149 (MQ=255) cgcTCATCAATA‑CAATCCATCCCCATAGCAACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTACTTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACACTCAGGTCCGTGACAAATCCTCCCAGCAGGGGACCCAACGTTGc < 1:207393/149‑1 (MQ=255) tcTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCg < 1:40762/148‑1 (MQ=255) gcTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCCCCCAACGTTGCg > 2:148510/1‑149 (MQ=255) taaaTA‑AAATCCTGCCCCATATCTCCATCGGGCAGTTGTTCATTCTTTTAGTGGGGTAATTCACACGCCAGCAAAAACTCTGCCGTGCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATa < 2:611175/147‑1 (MQ=255) tCAATA‑AAATCCTGCCCCATATCTACTTGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAACACTCTGCCGTTCATTCATCAACAATAAGGTCCGGGACATATCCTCACAGCAGGGCACCCAACGTTGCGTCATa > 1:582576/1‑149 (MQ=255) aaaa‑aaaTCCAGCCCCATATCTACATGGGTCAGATGATCAATCTTTTAGTGTGGTAAATCACACCCCAGAAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCAAGCAGGGAACCCCACGATGCGACATAGc > 1:587419/4‑149 (MQ=255) aaTA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACATTCAGGTCCGTGACATATCCTCCCAGCAGGGCCCCCAACGTGGCGTCATAGc > 1:530500/1‑149 (MQ=255) aaTA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACACTCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGc < 1:9907/149‑1 (MQ=255) aaTA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGc < 1:865156/149‑1 (MQ=255) a‑aaaTCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCctc < 2:820014/149‑1 (MQ=255) aaTCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCtt > 2:998393/1‑149 (MQ=255) aaTCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCtt < 2:455480/149‑1 (MQ=255) tCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTc < 1:393096/149‑1 (MQ=255) tCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTc < 1:179329/149‑1 (MQ=255) tCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTc > 1:999512/1‑149 (MQ=255) cTGCCCCATGTAGATATGGGGCAGTTTTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTTCCGTTCCTTAAACAACAAACAGGACCTTGAAATATACTCCCATCAGGGCACCCAACGTTGCCTCATAGCCTCTTTacc > 1:246563/1‑149 (MQ=255) cTGCCCCATGTAGATATGGGGCAGTAGTTCATTCTTTTAGTCTGTTAATTAACACGCCAGAAAAAACTCTGCAGTTCCTTCATCAACAATCAGGTCAGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGGCATAGACTCTTTccc > 1:386571/1‑149 (MQ=255) tGCCCCATGTAGATATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCCACCAACGTTGCGTCATAGCCTCTTTcccc > 1:329198/1‑149 (MQ=255) tGCCCCATGTAGATATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTcccc > 1:812067/1‑149 (MQ=255) tGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCCGCAAAAACTCTCGCGTTCCTTAATCAGCAATCAGGTCCGTGACATATCCTCCCAGCAGGGCGCCCAACGATGCGTCATAGCCTCTATcccc > 1:495521/1‑149 (MQ=255) ccccATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTcccccc > 1:250272/1‑147 (MQ=255) ccATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCccacca < 1:499083/149‑1 (MQ=255) atCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCaa < 1:657415/149‑1 (MQ=255) atCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCaa < 1:953333/149‑1 (MQ=255) | CGGTGGAGTTGCATGACAAGGTCATCGGGCATTATCTGAACATAAAACACTATCAGTAAGTTGGAGTCATTACCGACCATGTTTATTTCATACATTGTGGGTATTGTTCTTATTATCGCCGCTAATCAATA‑AAATCCTGCCCCATATCTACATGGGGCAGTTGTTCATTCTTTTAGTGTGGTAATTCACACGCCAGCAAAAACTCTGCCGTTCCTTCATCAACAATCAGGTCCGTGACATATCCTCCCAGCAGGGCACCCAACGTTGCGTCATAGCCTCTTTCCCCACCAGCAA > NC_000913/4519166‑4519459 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |