| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,720,364 | G→T | 8.2% | intergenic (+21/+26) | slyB → / ← slyA | outer membrane lipoprotein/global transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,720,364 | 0 | G | T | 8.2% | 1341.1 / 31.7 | 414 | intergenic (+21/+26) | slyB/slyA | outer membrane lipoprotein/global transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (254/109); new base T (2/49); total (256/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.22e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 441 total aligned reads displayed.
CTGGAAATTCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCT > NC_000913/1720215‑1720513 | cTGGAAATTCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGTCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCTTGTGG‑TCAgg > 1:4512/1‑150 (MQ=255) tGGAAATTCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGt > 2:5510001/1‑150 (MQ=255) ggAAATTCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGtt > 1:3877507/1‑150 (MQ=255) aaTTCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACt < 2:7815014/150‑1 (MQ=255) ttCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGa > 2:3639597/1‑150 (MQ=255) ttCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGa < 1:10815467/150‑1 (MQ=255) tCGTCAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGAc < 1:11345664/150‑1 (MQ=255) tCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGAc < 1:3592383/150‑1 (MQ=255) tCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGAc < 1:6706741/150‑1 (MQ=255) cGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGAcc < 1:2217201/150‑1 (MQ=255) tAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACcac > 1:9945944/1‑150 (MQ=255) tAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACcac > 1:3314800/1‑150 (MQ=255) gaaaGACGATGGTACGACCATCATGGTGGTACAGAAACAAGGCAACACTCGGTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTGGCGTGTGG‑TCAGGTTACTGACcac < 2:4542824/149‑1 (MQ=255) aaaGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGTAACCTGACcaca < 2:6869146/150‑1 (MQ=255) aaaGACGATGGTAATACAATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGTAACCTGACcaca < 1:7013907/150‑1 (MQ=255) aTGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGccccc > 1:8301157/1‑150 (MQ=255) ggTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCtt > 2:3434969/1‑150 (MQ=255) aCCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTc > 2:6515897/1‑150 (MQ=255) catcatGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCAc > 1:8257571/1‑150 (MQ=255) catcatGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCAc > 2:816109/1‑150 (MQ=255) catcatGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCAc > 2:712110/1‑150 (MQ=255) tggtggTACTGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCttt > 1:6866188/1‑150 (MQ=255) gtggtACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTgg > 1:957219/1‑150 (MQ=255) tggtACTGAAACATGGAAACACTCGTTTCTCTCGGGGCAAAGGTGTCGTACTGGCCTGCAATGGCT‑GTCTGGTGACGGTTTCTCCGCGATAATTATGTTTGCGTGTGG‑TCTGGTTCCGGACCACACGCCCCCTTCATTTCACCCTTTGGc < 2:4142001/150‑1 (MQ=255) tggtACATAACCACGGCACCACTGGTTTGTCTCGGGGCCAAGGGGACGTCGTGGCCAGCACTGGCA‑GTAGGGTGACCGTTTCTCCGCGCTAATTATTTTTGCGTGTGG‑TCTGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGc < 2:4983434/150‑1 (MQ=255) tggtACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGc > 2:8489654/1‑150 (MQ=255) tggtACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGGTACTGACCACACGCCCCCTTCATTTCACCCTTTGGc > 1:7467954/1‑150 (MQ=255) tACAGAAACATGGCAACACTGGTTTCTCTCCGGGCCACCTTGTCGTCCTGGCCAGCATGGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATACGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACACTTTGGCCTg < 2:12181191/150‑1 (MQ=255) tACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTg > 1:7145003/1‑150 (MQ=255) tACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTCGGCCTg > 2:480433/1‑150 (MQ=255) aCAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGt > 1:5041098/1‑150 (MQ=255) aCAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGt > 2:2109333/1‑150 (MQ=255) aGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTaa > 1:2743486/1‑150 (MQ=255) aGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTaa > 1:2538938/1‑150 (MQ=255) aGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCTTTTCTCCGCTCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATg < 2:10131665/150‑1 (MQ=255) gCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACGGGCCAGCAGTGGCA‑GTCAGGTGAGCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCCGGTTACTGAGGTCACGCCCGCGGCGTGTCACCCTTTGGCCTGTTACTCAATggt > 2:3217832/1‑148 (MQ=255) cAACACTCGTTTCTCTCCGGGCCAACGTGTCTTACGGGACAGCACTGGCT‑GTCTGTTGACGGTTTCTCCGCGATAAATAAGTTTGCGTGTGG‑TCTGTTTATTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGata < 2:2846902/150‑1 (MQ=255) tCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTACACCCTTTGGCCTGTAACTCAATGATATTATGc > 1:1649738/1‑150 (MQ=255) tCGTTTCTCTCCGGGACAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTATGGCCTGTAACTCAATGATATTATGc > 2:12274439/1‑150 (MQ=255) gTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTc > 1:10315680/1‑150 (MQ=255) gTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTc > 1:3105891/1‑150 (MQ=255) tctcCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGtt > 2:394666/1‑150 (MQ=255) tctcCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGtt > 1:1546579/1‑150 (MQ=255) tcCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGtttt > 1:4555746/1‑150 (MQ=255) tcCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGtttt > 1:10019508/1‑150 (MQ=255) tcCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGtttt > 1:8194004/1‑150 (MQ=255) ccGGGCAACCGTGTCGTACTGGCCAGCATTGGCA‑GTCTGGTGACCGTTTCTCCGCGCTAAATATGTTTGCGTGTGG‑TCTGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTg < 2:6198665/150‑1 (MQ=255) ggCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGa > 2:922890/1‑150 (MQ=255) gCCAACGTGTCGTACTGGCCAG‑AATGGGACTTCCGGTGACCGTTTCTCCGCGCTAAATATTTTTGCGTGTGG‑TCTGTTTACTCACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGAt < 2:6729796/150‑1 (MQ=255) aCGTGTCGTACGGGCCTGAACTGGCT‑GTCAGGTGACCTTTGCACCGCGCTAAATATTTTTG‑GTTTGGTTCCGGTTCGGGACCCCACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGc < 2:2669952/150‑1 (MQ=255) gtgtCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGt > 2:1557699/1‑150 (MQ=255) tCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAAt > 2:5818611/1‑150 (MQ=255) tCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATGTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAAt > 2:172039/1‑150 (MQ=255) tACTTGCCCGCAATGGAA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTATGCGTGAGG‑TCAGGTAACTGACCACACGCCCCCTTCATTTCAAACTTTGGCCTGTAACTCAATGATATAATGCTCAAGGTTTGCGATGATCGTAATCAg > 2:10443325/1‑150 (MQ=255) cgtGGCCAGCTTGGGCT‑GTCTGGTGACCGTTACTCCGCGATAATTTTGTTTGGTTGTGG‑TCTGTTTACTCACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGt < 1:11156528/148‑1 (MQ=255) aCTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGt > 1:9477581/1‑150 (MQ=255) aCTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGt > 2:1834047/1‑150 (MQ=255) tGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATACGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTGCATTTCACCCTTTGGCCTGTCACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTg > 2:4315425/1‑150 (MQ=255) tGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTg > 1:6264845/1‑150 (MQ=255) tGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTg > 2:2237423/1‑150 (MQ=255) ccAGCATTGGCT‑GTCTGGTGACCGTTTCTCCGCTATAATTAAGTTTGGTTTTGG‑TCTGTTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTc < 2:7461946/150‑1 (MQ=255) cAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTcc > 2:11815890/1‑150 (MQ=255) aGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCa > 2:7972272/1‑150 (MQ=255) aagggCT‑GTCTGGTGCCCGTTTCTCCGCGCAAAATACTTTTGCGTGTGT‑TCTGTTTACTCACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGtt < 1:10973345/147‑1 (MQ=255) ttGGCT‑GTCTGGTGACCGTTTCTCCGCTCTAAATATTTTTGGTTGTGT‑TATGTTTACGGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTc < 2:10735676/149‑1 (MQ=255) gCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCctc > 2:5190297/1‑150 (MQ=255) a‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTg > 1:8648855/1‑150 (MQ=255) tggTGTCCTTTTATCGGCTTTAAATTAGTTTGCTTGTGG‑TCAGTTTACTTACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGga < 1:9205006/149‑1 (MQ=255) tttGAGCGTTTGTCCGCGATAAATATGTTGGGGTGTGT‑TCTGGTTACTGACCCCACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGgag < 2:7243834/148‑1 (MQ=255) ggTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGgag > 2:11295673/1‑150 (MQ=255) gTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGgaga > 1:1918692/1‑150 (MQ=255) tgccgttttCTCCGCGATAAATATGTTTGGGTGTGG‑TCTGTTTACTCACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGAt < 1:12263773/144‑1 (MQ=255) tGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGAt < 2:10908452/150‑1 (MQ=255) tGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGAt > 2:1434242/1‑150 (MQ=255) aCCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCGTTGGCCTGTAACTAAATTATATTATTCTGAATTTTTGAGATTAGCGTAATAAGTTGCTCCAGTTCCTCTGAGGAGAttc > 1:5401854/1‑148 (MQ=255) aCCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCGTCCTTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGc > 1:9901108/1‑150 (MQ=255) ccGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGcc > 2:11110364/1‑150 (MQ=255) tcCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAat > 2:8614658/1‑150 (MQ=255) cgcgCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGCTGCCATGTAatat > 1:7687706/1‑150 (MQ=255) cgcTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCGGTAACACAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGGTCCTCTGCGGAGATGCCATGGAATAttt > 1:884418/1‑150 (MQ=255) cgcTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCATCATTTCACCCTTTGGCCTGTAACACAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCCGGTAATAttt > 1:1374593/1‑150 (MQ=255) gcTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACCCCCCCTTCATTTCACCCTTTGGCCAGTAACACAATGATATTATGCTCAAGTTTTGCGAAGAGCCTAATCAGTTGCTCCAGTTGCGATGCGGAGATGCCATGTAATATTTc > 1:11829819/1‑150 (MQ=255) tAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACTGGCCCCCTTGATTTCACCCTTTGGGGTGTTACTCAATGATTTTATGGTGTTGTTTTGGGATGTGGGTTTTGTGTTGGTGCAGTTGGTGTGCGGTGTTGGGATGTATTAtttggg > 2:8273098/1‑147 (MQ=255) tGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGtttt < 2:9016141/150‑1 (MQ=255) cGTGTGG‑TCTGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGt < 1:6096318/150‑1 (MQ=255) gtgtGG‑TCTGTTTCCTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGtt < 1:1154164/150‑1 (MQ=255) gtgtGG‑TCAGTAACCTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTGTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCAGGTACTAGTTCCGCGCGGGTTTTGtc > 2:2958279/1‑149 (MQ=255) gtgtGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCACTGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGGTCCTCTGCGGAGATGCCATGTAATCTGTCCGCGCGGGTTTTGtt > 2:9825538/1‑150 (MQ=255) gtgtGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTCATATTTCCGCGCGGGTTTTGtt > 2:5631902/1‑150 (MQ=255) gtgG‑TCAGTTTACTGCCCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTtaa < 2:1683487/150‑1 (MQ=255) tgG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTtaat > 1:5708617/1‑150 (MQ=255) g‑TCTGGTTACTTACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTtaataa < 2:2346657/150‑1 (MQ=255) g‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTtaataa > 2:9643432/1‑150 (MQ=255) tctggTTCCTGCCCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAAc < 1:11679049/147‑1 (MQ=255) tCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAAc > 1:5914984/1‑150 (MQ=255) tCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAAc > 2:11487789/1‑150 (MQ=255) cggTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAg < 1:8044551/149‑1 (MQ=255) gTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCt > 1:119454/1‑150 (MQ=255) gTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCt > 2:8837017/1‑150 (MQ=255) gTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCt > 2:1990674/1‑150 (MQ=255) | CTGGAAATTCGTAAAGACGATGGTAATACCATCATGGTGGTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAACGTGTCGTACTGGCCAGCAATGGCA‑GTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCGTGTGG‑TCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCT > NC_000913/1720215‑1720513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |