| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,454,266 | C→A | 5.1% | pseudogene (736/2646 nt) | yfcU ← | pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,454,266 | 0 | C | A | 5.1% | 3312.0 / 16.9 | 1028 | pseudogene (736/2646 nt) | yfcU | pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (506/429); new base A (3/90); total (509/519) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.19e-25 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1051 total aligned reads displayed.
TGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGTTGCCGC > NC_000913/2454117‑2454415 | tGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGc > 2:4007672/1‑150 (MQ=255) gcgcGTCGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCat < 1:9811436/150‑1 (MQ=255) gcgcGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAACACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCat < 1:7132396/150‑1 (MQ=255) gcgcGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACTGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCat < 1:11247758/150‑1 (MQ=255) gcgcGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCat > 1:7603992/1‑150 (MQ=255) gcgTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTACAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCataa < 2:3350665/150‑1 (MQ=255) gcgTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCataa > 2:5168601/1‑150 (MQ=255) cgTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCataat < 2:2832536/150‑1 (MQ=255) aGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGc < 2:2458246/150‑1 (MQ=255) ccGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGa < 2:4322836/150‑1 (MQ=255) ccGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGa > 2:1508773/1‑150 (MQ=255) ttGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGactccactcc > 1:18886/1‑150 (MQ=255) ggAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACGGTCGAAAATATCGGAATTGTGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTATTGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑t < 2:6950675/150‑1 (MQ=255) gCAACATTTGATCTTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGATTTGAGGTAATCTTCGCCCAGCGCCTGTTTGGCTTTTAATGACGGTAACGCCCGCCTGGAATAATAGCGACTCCACTCCCA‑ttttt < 2:4443383/150‑1 (MQ=255) gCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑ttttt > 2:462633/1‑150 (MQ=255) aaCATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCTAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑ttttttt < 2:1349435/150‑1 (MQ=255) aaCATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑ttttttt > 2:6070621/1‑150 (MQ=255) aaCATTGGATCGTCAGTGCTGACACTGCCACCAACATAATTACACCCGTCGAAAATATCGGATTTGAGGTAATCTTCGCCCCGCGCCATTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATATTAGCGACTCCACTCCCA‑ttttttt < 2:9711063/150‑1 (MQ=255) aTTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTtgt > 2:10523851/1‑150 (MQ=255) tttaTCGTCTGTGCTGACACTGCCACCAAAATAATTAAAACCGTCGAAAATATCGGATTTGAGTTAATCTTCGCCCAGCGCCTGTTTGGCTTTTAATGAGGTTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCA‑TTTTTTTtgtgt < 2:1110964/147‑1 (MQ=255) tGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTtgtgtg > 1:10032798/1‑150 (MQ=255) gTCAGTGCTGACACTGCCACCAACATAATTAAGACCGTCGAAAATATCGGATTTGAGGTAATCTTCGCCCAGCGCCTGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATc < 2:578762/150‑1 (MQ=255) gACACTGCCACCAACAGAATTAAAACCGTCGAAAATATCGGACTTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGGGTGTCATCGCCGCCaaa > 2:3179275/1‑150 (MQ=255) ccgCCACCAAAATAATTAAACCCGTCTAAAATATCGTATTTGCGGTAATCTGCGCCCAGCGCCTTTTTGGCTTTTAATGACGTTACCGCCCGCCAGGAATAACAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCa < 1:2931129/148‑1 (MQ=255) tGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCAt > 1:6259633/1‑150 (MQ=255) tGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCAt > 2:1968598/1‑150 (MQ=255) tGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCAt > 2:2256221/1‑150 (MQ=255) tGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGACAGTTAGGCTTTTAATGACGTTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATACAt > 2:7778181/1‑150 (MQ=255) ggCCACAAAATTAATAAAAACGGGCTAAAATTTGGGATTTGTGGTTTTCTGCGCCCGGGGCCTGTTGGGTTTTTATTGAGGTTAACGCCGGCCTGGCATAATCGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCAt < 1:2603746/149‑1 (MQ=255) cccaccaAAATAATTAAACCCGTCTAAAATATCGGATTTGTGTTAATGTCCGCCCAGGGCCTTTTTGGCTTTTAATGACGGAAACGCCCGCCAGCAATAATCGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATc < 1:11404944/149‑1 (MQ=255) accaACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtc > 1:5129023/1‑150 (MQ=255) accaACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTAGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtc > 1:3848688/1‑150 (MQ=255) aaCATAATTAAAACCTTCTAAAATATCGCAATTGTGTTAATCTCCGCCCAGCGCCAGTTTGGATTTTAAGCACGTTACCGCCCGCCAGGCATAATCGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatc < 1:5747913/150‑1 (MQ=255) aaCATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatc > 2:4766214/1‑150 (MQ=255) aaCATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatc > 2:656173/1‑150 (MQ=255) aCATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatc > 1:6907800/1‑150 (MQ=255) cATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatcat > 1:3071450/1‑150 (MQ=255) ctAATTAAACCGGTCGAAAATCTCGGAATTGTGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTATGGAGGGTAACGCCCGCCTGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatcatc < 2:9533086/149‑1 (MQ=255) aTAATTAAAACCGTCGAAAATATCGGATTTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatcatc < 2:3729716/150‑1 (MQ=255) aTAATTAAAACCGTCGAAAATAACGGAATTGAGGTAATCTTCGCCCAGCGCCATTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatcatc < 2:1706912/150‑1 (MQ=255) tAATTAAAACCGTCTAAATTTTGTTTTTTGTGGTAATCTTCGCCCAGCGCCTTTTTGGCTTTTAATGAGGTTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatcatca < 1:331486/150‑1 (MQ=255) tAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatcatca > 1:120062/1‑150 (MQ=255) cccGTCTAAATTATCGTATTTGAGTTAATCTTCGCCCAGCGCCTGTTTGGCTTTTATTGACGTTAACGCCCGCCAGGAATAATCGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTgcg < 1:3709209/149‑1 (MQ=255) cGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGcgcg < 2:8139648/150‑1 (MQ=255) tCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTa > 1:7889530/1‑150 (MQ=255) cGAAAATATCGGAATGGTGGTAATCTGCGCCCTGCGCCAGTTGGGCTTTTACTGACGGTAACGCCCGCCTGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTAt < 1:8114766/150‑1 (MQ=255) gAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATg > 1:9927814/1‑150 (MQ=255) actatCGGAATTGTGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTg < 2:10155363/148‑1 (MQ=255) tatCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTGGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGAt < 1:9595462/150‑1 (MQ=255) atCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATa > 2:7279751/1‑150 (MQ=255) atCGGAATGGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATa < 2:8721084/150‑1 (MQ=255) tCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAg > 2:12178782/1‑150 (MQ=255) ggAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGtt > 1:10283531/1‑150 (MQ=255) aaTTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTgg > 1:4144330/1‑150 (MQ=255) tGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCt < 2:6396048/150‑1 (MQ=255) gAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTg < 2:3903175/150‑1 (MQ=255) gAGGTAATCTCCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGAATAATCGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTg < 1:8293363/150‑1 (MQ=255) aGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGc > 1:7367068/1‑150 (MQ=255) gTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGAGGGTACCGCCCGCCAGGAATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCa < 1:10444103/150‑1 (MQ=255) gTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCa > 1:853422/1‑150 (MQ=255) gTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCa > 1:4625929/1‑150 (MQ=255) tCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATAGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCa > 1:484371/1‑150 (MQ=255) cTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAg > 1:10669294/1‑150 (MQ=255) ttCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAgc > 1:4409315/1‑150 (MQ=255) ttCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAgc > 2:6299491/1‑150 (MQ=255) tCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTCGATAGTTGGTCTGCCAGTCAgcg > 1:6026974/1‑150 (MQ=255) cccAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAgcgcgc < 2:826334/150‑1 (MQ=255) ccAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGGTAGTTGGTCTGCCAGTCAGCGCGCa > 1:6404302/1‑150 (MQ=255) ccAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACACCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCCAATTCATCGTCATCATCATTACTGCGCGTCTGTTGATAGTTGGTCTGCCAGTCAgcgcgcc > 1:5227433/1‑149 (MQ=255) cctttttGGATTTTAATGACGTTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGcc < 2:1071845/146‑1 (MQ=255) ctgTTTGGATTTTAATGACGGTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCa < 1:11827042/148‑1 (MQ=255) tttGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATgg > 1:11643470/1‑150 (MQ=255) tttGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGACAGTCAGCGCGCATACGCCATgg < 2:10988747/150‑1 (MQ=255) tttGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TCTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATgg > 2:8480789/1‑150 (MQ=255) ttttAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAg < 1:9177220/150‑1 (MQ=255) ttttAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAg > 1:11010428/1‑150 (MQ=255) aTGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGGTAGTTGGTCTg > 1:10210146/1‑115 (MQ=255) aTGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTaa < 1:5427794/150‑1 (MQ=255) aTGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTaa < 1:2284650/150‑1 (MQ=255) tGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAAc > 2:4997856/1‑150 (MQ=255) tGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAAc > 1:87584/1‑150 (MQ=255) cGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAAcccc > 2:10277313/1‑150 (MQ=255) ggTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCg > 2:8997609/1‑150 (MQ=255) gTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGa < 1:6575185/150‑1 (MQ=255) gTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGa < 2:7913632/150‑1 (MQ=255) cgcccgccAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGt > 2:11555258/1‑150 (MQ=255) cccgccAGGCATAATATCGACTCCACTCCCATTTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTc < 2:7077239/150‑1 (MQ=255) ccgccAGGCATAATCGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTccc < 2:5434552/150‑1 (MQ=255) ccgccAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTccc < 1:12236013/150‑1 (MQ=255) cgccAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCg > 2:3020801/1‑150 (MQ=255) cgccAGGCATAATAGCGACTCCACTCCCA‑TTTGTTTTGGGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCg > 2:11336786/1‑150 (MQ=255) gccCGGCTTAATCGCGACTCCACTCACA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACCGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGt < 2:9290814/150‑1 (MQ=255) gccAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGt < 1:3486638/150‑1 (MQ=255) ccAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGtt < 2:11967437/150‑1 (MQ=255) ccAGGCAAAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGtt < 2:7439841/150‑1 (MQ=255) cAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGTTg < 1:1561257/150‑1 (MQ=255) aGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGTTGc > 2:1164951/1‑150 (MQ=255) ggCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGTTGcc < 1:953242/150‑1 (MQ=255) gCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGTTGCCg > 2:4165194/1‑150 (MQ=255) cATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTAGTGCGCGTATGTTGATAGTTGGTGTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCGCGTTGCCGc > 2:8598587/1‑150 (MQ=255) | TGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCA‑TTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGTTGCCGC > NC_000913/2454117‑2454415 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |