Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,239,612 A→C 8.5% intergenic (+67/‑332) alx → / → sstT putative membrane‑bound redox modulator/sodium:serine/threonine symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,239,6120AC 8.5% 1355.8 / 7.6 468intergenic (+67/‑332)alx/sstTputative membrane‑bound redox modulator/sodium:serine/threonine symporter
Reads supporting (aligned to +/- strand):  ref base A (299/79);  new base C (4/38);  total (303/165)
Fisher's exact test for biased strand distribution p-value = 2.34e-19
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 491 total aligned reads displayed.

GCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATTTTT  >  NC_000913/3239463‑3239761
                                                                                                                                                      |                                                                                                                                                      
gCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCa                                                                                                                                                        <  1:4595924/150‑1 (MQ=255)
gCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCa                                                                                                                                                        <  1:8289358/150‑1 (MQ=255)
   tggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAggg                                                                                                                                                     >  1:1160142/1‑150 (MQ=255)
      tgtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGg‑aga                                                                                                                                                 <  1:7656028/150‑1 (MQ=255)
       gtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑agag                                                                                                                                                <  1:1451230/150‑1 (MQ=255)
        tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAgg                                                                                                                                               <  1:4098208/150‑1 (MQ=255)
        tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAgg                                                                                                                                               <  1:2970474/150‑1 (MQ=255)
        tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAgg                                                                                                                                               >  1:9379959/1‑150 (MQ=255)
        gttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAgg                                                                                                                                               >  2:4704598/2‑150 (MQ=255)
           ggCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTc                                                                                                                                            <  2:1887924/150‑1 (MQ=255)
           ggCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTc                                                                                                                                            >  1:10824293/1‑150 (MQ=255)
             cATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCgg                                                                                                                                          >  2:1497671/1‑150 (MQ=255)
             cATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCgg                                                                                                                                          <  2:2952834/150‑1 (MQ=255)
              aTTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCggg                                                                                                                                         <  2:8151276/150‑1 (MQ=255)
               ttCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCgggg                                                                                                                                        >  2:4422550/1‑150 (MQ=255)
                  tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGa                                                                                                                                     <  2:8532536/150‑1 (MQ=255)
                     tgatgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGAGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAggg                                                                                                                                  >  2:5900011/1‑150 (MQ=255)
                       atgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTa                                                                                                                                >  1:9994151/1‑150 (MQ=255)
                          aCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAAtt                                                                                                                             >  2:9753677/1‑150 (MQ=255)
                            gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                           >  2:2146079/1‑150 (MQ=255)
                             tttATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAAttttt                                                                                                                          >  2:4823804/1‑150 (MQ=255)
                              ttattaTCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTc                                                                                                                         >  1:6291470/1‑150 (MQ=255)
                                    tCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                                                                                                   >  1:8040002/1‑150 (MQ=255)
                                    tCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCg                                                                                                                   >  2:11676961/1‑150 (MQ=255)
                                               gTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTg                                                                                                        >  1:10385447/1‑150 (MQ=255)
                                                   aTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTcc                                                                                                    >  2:6119636/1‑150 (MQ=255)
                                                    ttttCGGAATGTTAAGCTGGGGGGTTTATTTTTTTTAAGCTGCATAAGCGGTGTCCCCTTTATTTAAAATGTGCACCGTTTT‑CTCCCTCGCCCTTCCAGGT‑TGCGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTccc                                                                                                   <  2:631290/147‑1 (MQ=255)
                                                       tCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCACCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCAACGATGCTGGCCTGTTacccga                                                                                                >  1:3264073/1‑148 (MQ=255)
                                                         ggaaTGATAAGCAGCGGGGTGTATAATTTTTAATCTGCCTACGCCGTGTACCCTGTCTTTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAc                                                                                              <  2:11189421/147‑1 (MQ=255)
                                                           cATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAccc                                                                                            >  1:8568637/1‑150 (MQ=255)
                                                           cATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAccc                                                                                            >  1:1362645/1‑150 (MQ=255)
                                                           cATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTAACCTCAccc                                                                                            >  1:2245525/1‑150 (MQ=255)
                                                            aTGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCt                                                                                           >  1:5163573/1‑150 (MQ=255)
                                                             tGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTa                                                                                          >  1:4814660/1‑150 (MQ=255)
                                                              gATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTaa                                                                                         >  2:9589671/1‑150 (MQ=255)
                                                                tAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTGT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAcc                                                                                       >  2:11031136/1‑150 (MQ=255)
                                                                 aaGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAccc                                                                                      >  2:548001/1‑150 (MQ=255)
                                                                  cgcgggggggTGTATATTTTTTAATCTGCCTACGCCTGTTACCCTTTCATTAACTTGAGC‑CCGTTTT‑CCCCCCCCCCCCTCCCGGGTTGTGGGTGGGGGTGTGGTAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCct                                                                                     <  1:9838305/144‑1 (MQ=255)
                                                                   gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCatc                                                                                    >  1:9116251/1‑150 (MQ=255)
                                                                       cGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTccc                                                                                >  2:10162835/1‑150 (MQ=255)
                                                                         gggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCa                                                                              >  2:1265955/1‑150 (MQ=255)
                                                                           gtgtATAATTTTTAATGTGCCTAAGCGGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCCGGG‑AGTGGGTCGGGTTTAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCaaa                                                                            <  2:7156157/150‑1 (MQ=37)
                                                                           gTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCaaa                                                                            >  2:12143542/1‑150 (MQ=255)
                                                                           gTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCaaa                                                                            >  1:169287/1‑150 (MQ=255)
                                                                              gATTATTTTTATTCTGCCTACGGGTTGTCCCGTGTCTTTAACTTGTGCACGGTTTT‑CTCCCTCTCCCTTCCTGGG‑TGTGGGTCGGGTTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                                                                         <  2:4071755/150‑1 (MQ=21)
                                                                              gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCACACgg                                                                         >  1:10005723/1‑150 (MQ=255)
                                                                              gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                                                                         >  1:6797603/1‑150 (MQ=255)
                                                                               aTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg                                                                        >  2:2610390/1‑150 (MQ=255)
                                                                                tAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgggg                                                                       >  2:8830122/1‑150 (MQ=255)
                                                                                   tttttATTGTGCATAAGCTTTTTACAGTTTCTTTAAAATGAGCACCTTTTT‑CTCCTTCTCCTTTCCTGGT‑TGTGGGTCGGGGTGCGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGa                                                                    <  1:8831087/150‑1 (MQ=21)
                                                                                   tttttACGCTGCCTACGCGGTTGCCCCTGCAATTCACAGGCGCACCGTGTG‑CCCCCCCGCCCTTCCTGGT‑CGAGGGTGGGGGTGAGGTTAATTTTTCGCACCGCTGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGa                                                                    <  2:10476611/150‑1 (MQ=12)
                                                                                   tttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCGCACCCGAACCCTCTCCCCAAACGGGGCgc                                                                    >  2:3735345/1‑149 (MQ=255)
                                                                                    ttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCACCCCAAACGGGGCGAg                                                                   >  1:2400223/1‑150 (MQ=255)
                                                                                       tAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCATCACCCTAAACATCTCCACAAACGGGTCGAgtgg                                                                >  2:6620577/1‑150 (MQ=255)
                                                                                        aaTCTGCCTATGCCGTGTACCCTGACATTAACTTTACCACCGTTTT‑CTCCCTCCCCCTTCCTGGG‑AGTGGGTGGGGGTGAGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGa                                                               <  1:7585703/150‑1 (MQ=25)
                                                                                         aTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGAc                                                              >  2:859823/1‑150 (MQ=255)
                                                                                          tCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACt                                                             >  2:12043348/1‑150 (MQ=255)
                                                                                           cTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTg                                                            >  1:3732451/1‑150 (MQ=255)
                                                                                            tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                           >  2:10619822/1‑150 (MQ=255)
                                                                                            ggCCTAAGCCGTGTACCCTGTCATTACCATGAGCACCGTTTC‑CTCCCTCTCCCTACCAGGG‑TGTGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                           <  1:10182882/149‑1 (MQ=25)
                                                                                             gCCTAAGCGGTGCACCCTGTAATTAACATGCGCCCCGTTGT‑CCCCCGCCCCCTTCCTGGT‑TGTGGGTGGGGGTGTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAc                                                          <  1:1838541/150‑1 (MQ=21)
                                                                                             gCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCCGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAc                                                          <  2:5180858/150‑1 (MQ=255)
                                                                                              ccTACGCCGTGTCCCCTGACATTAACCTGCGCACCGTTTT‑CTCCCTCTCCCTTCCTGGT‑TGAGGGTCGGGGTTTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                         <  2:6923154/150‑1 (MQ=25)
                                                                                              ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                         <  1:8958533/150‑1 (MQ=255)
                                                                                              ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                         >  2:2419937/1‑150 (MQ=255)
                                                                                                  cggggtgtACCGTGTCATTAAACTGCGAACGGTTGG‑GGCCCTCGCCCTCCCCGGG‑TGTGGGTGGGGGGGTGGGAAATTTTTCGCACCGTTGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGAGTGCCCGAGt                                                     <  2:7355610/146‑1 (MQ=12)
                                                                                                  cgCCGTGTCCCCTGTCATTACCTGGCGCCCCGTTTG‑CGCCCGCGCCCTGCCGGGG‑CGTGGGTGGGGGGGCGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGt                                                     <  2:1683292/149‑1 (MQ=21)
                                                                                                       tgtACCCTGTCCTTAACCTGCGCACGGTTTT‑CGCCCCCGCCCTGCCGGGG‑TGCGGGGGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCttt                                                <  2:122325/150‑1 (MQ=21)
                                                                                                          aCCTTGTAATTAACTTGAGCACCGTTTT‑CTCCCTCTCCCTTCCTGGG‑TGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtttttt                                             <  1:7264230/150‑1 (MQ=25)
                                                                                                           cccTGTCTTTAACATGAGCACCTTTTT‑CTCCCTCTCCCTTCCAGGG‑AGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTg                                            <  2:8987433/150‑1 (MQ=255)
                                                                                                            ccTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑TGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGa                                           <  1:11873563/150‑1 (MQ=255)
                                                                                                             cTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGTGTAATTTTTCGCACCGATGATGGGCTGTTACCCTCACCCTAACCATCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTgtt                                          >  1:310432/1‑148 (MQ=255)
                                                                                                                   ttAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCACTCCCCAAACGGGGCGCGGGGACTGACCGCGTCCTTTTTTGAtgttggc                                    >  2:8258771/1‑148 (MQ=255)
                                                                                                                     acctttcgCACGGTTTC‑CCCCCTCCCCCTCCGGGGG‑TGTGGGTGGGGGGGGGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtcat                                  <  1:5633781/143‑1 (MQ=21)
                                                                                                                     aaattGAGCACCGTTTA‑CCCCCTCTCCCTTCCCGGG‑TGCGGGTCGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtcat                                  <  2:945264/146‑1 (MQ=25)
                                                                                                                      aCATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtcatc                                 >  1:1139339/1‑150 (MQ=255)
                                                                                                                        aTGAGCACCGTTTT‑CTCCCTCTCCCTTCCTGGG‑AGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAg                               <  2:9177025/150‑1 (MQ=255)
                                                                                                                        aTGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAg                               >  1:11031561/1‑150 (MQ=255)
                                                                                                                         tGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTAACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGt                              >  2:10382701/1‑150 (MQ=255)
                                                                                                                          gAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCGTGTTTGATGTTGTCATCAGTc                             >  1:9523495/1‑150 (MQ=255)
                                                                                                                          gAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCAAACCCACTACCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGta                             >  1:3946170/1‑149 (MQ=255)
                                                                                                                           aGCACCTTTTC‑CCCCCTCCCCCGCCCCGGG‑TGCGGGTGGGGGTGTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCt                            <  1:4947169/150‑1 (MQ=25)
                                                                                                                            cccccGTTTTACCCCCTCGCCCTCCCGGGG‑TGTGGGTGGGGGTGTGGTAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCt                            <  1:4407541/147‑1 (MQ=21)
                                                                                                                             cACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTgg                          >  1:12237637/1‑150 (MQ=255)
                                                                                                                             cACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCACACCCTAACCCACTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTgg                          >  2:5345554/1‑150 (MQ=255)
                                                                                                                              aCCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTGTTTTGATGTTGTCATCAGTCTGGa                         >  2:10759976/1‑150 (MQ=255)
                                                                                                                               ccGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGaa                        >  1:7441808/1‑150 (MQ=255)
                                                                                                                                   ttt‑CTCCCTCTCCCTTCCCGGG‑TGTGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCg                    <  2:6997448/150‑1 (MQ=255)
                                                                                                                                         ccctctcccaTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTAGCACCGATGCTGGCCTGTTACCCTCACCCAAACCCACACCCCAAACCGGGCGAGGGGACTGAACCCGTCCATTTTTTATTTTTTAATCAGTATGGAATCCCCACGt               >  1:9317506/1‑150 (MQ=255)
                                                                                                                                          cctctccctTCCAGGG‑AGAGGGTCGGGGGGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCAAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCCTCAGTCTGGCAGCCGCTCGtt              >  1:2771071/1‑150 (MQ=255)
                                                                                                                                          cctcgccctCCCTGGG‑TGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt              <  1:6599799/150‑1 (MQ=37)
                                                                                                                                           ctctccctTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGCCTGACCGAGTCCTTGGTTGCTGTTGTCATCAGTCTGGGAGCCGCACGTTg             >  2:72012/1‑150 (MQ=25)
                                                                                                                                              tccctTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCt          >  1:12079494/1‑150 (MQ=255)
                                                                                                                                              gccctTCCCGGG‑AGTGGGTCGGGGGGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCt          <  1:7786655/149‑1 (MQ=255)
                                                                                                                                                  ttCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAt      >  2:5779727/1‑150 (MQ=255)
                                                                                                                                                  ttCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAt      >  1:8189197/1‑150 (MQ=255)
                                                                                                                                                  ttCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAt      >  2:3470670/1‑150 (MQ=255)
                                                                                                                                                   gccAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAtt     <  1:5878487/149‑1 (MQ=255)
                                                                                                                                                      aGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAttttt  >  2:10872079/1‑150 (MQ=255)
                                                                                                                                                      aGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCACCCCCAAACGGGCGCGGGGACTGACCGCGTCCTTTTTTGTTTGTTTCATCAGTCTGGAATCCGCACGTTGGCTGTtttttt  >  1:5478787/1‑150 (MQ=21)
                                                                                                                                                      |                                                                                                                                                      
GCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATTTTT  >  NC_000913/3239463‑3239761

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑