| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,044 | T→A | 20.5% | intergenic (+27/‑171) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,044 | 0 | T | A | 20.5% | 2239.6 / 210.9 | 961 | intergenic (+27/‑171) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (114/599); new base A (209/4); total (356/605) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 1007 total aligned reads displayed.
GTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTG > NC_000913/3780895‑3781193 | ggCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCctct < 2:8661694/150‑1 (MQ=255) cGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAAACCTCTcc > 1:4080042/1‑150 (MQ=255) gATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCACAccc > 1:2051316/1‑150 (MQ=255) gACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCa < 1:6044538/150‑1 (MQ=255) aCGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑g < 1:8670214/150‑1 (MQ=255) cGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑gg < 1:5294416/150‑1 (MQ=255) cGCAGACGGGCGCGCAATCGAGGAGCGCAATGACGCAAGCTTCGCTGGTGCAGGGGCTGGGTCCAGAGTTGCCTGCGGGACTGGCTCCCATGGCGCAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGA‑gg < 2:8196687/150‑1 (MQ=255) gCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCGAAACCACAcccaaaagg > 1:4775869/1‑144 (MQ=255) gACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGgaga < 1:6274150/150‑1 (MQ=255) gcgcGAAATCGATCAGCGACAGTACGCAAGAATCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑a < 1:2930138/150‑1 (MQ=255) gcgcGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑a < 1:8829389/150‑1 (MQ=255) gcgcGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑a < 1:11787918/150‑1 (MQ=255) cgcgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGA‑GGGAGAgggtta < 2:1094572/150‑4 (MQ=255) cgcgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑Ac < 1:9019367/150‑1 (MQ=255) gcgAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCACTCCCACA‑GGGTGAGGGG‑Acc > 1:7888107/1‑150 (MQ=255) tCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCgg < 2:7160990/150‑1 (MQ=255) tCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCAAACCCGCACCCACACGGGGGGGGGG‑CCCGtggg > 1:2319477/1‑147 (MQ=255) tCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAAACCACACCCGCA‑GGGAGCGGGG‑CCCGGTCgg > 1:11022597/1‑150 (MQ=255) ggatgtgCGATATTACGCTTGATTCGCTGGTGCCGGGGCTGGGTTATGTGTTGCCTGCGGCACTGTCTGCCATGGCGAACGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCT‑GGGAGTGGGG‑ACCGTTCGgc < 2:9697910/144‑1 (MQ=255) gATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCTGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGgcg < 2:5011672/150‑1 (MQ=255) gATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAAACCACACCCACA‑GGGAGAGGGG‑ACCGGTCGgcg > 1:8103705/1‑150 (MQ=255) aTCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCGCACCCCCACCCACACCCACC‑GGGCGAGGGG‑CCCCGGCGgcgc > 2:6076583/1‑150 (MQ=255) tCAGCGATATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCt < 2:5857977/150‑1 (MQ=255) tCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCAAAACCACTCCCACA‑CGGCGAGGGG‑ACCCAGCGgcgcg > 1:11607880/1‑149 (MQ=255) gCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCACCCCCAAAACCACAACCACA‑AGGAGAGGGG‑GCCGGGCGGCGCcgtt > 1:11402673/1‑149 (MQ=255) cGAAATTCCGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGATTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCtgtat < 1:10519520/150‑1 (MQ=255) cGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCtgtat < 1:3280182/150‑1 (MQ=255) tACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTc < 1:6888281/150‑1 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCGCCACCGAACCCAAACCCGCA‑GGGCGGGGGG‑ACCCTTCGGCGCGGTATGTAATccca > 1:7164681/1‑149 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCGCCCCCAAAACCAATCCCGAC‑GGGAGAAGGG‑ACCCTTAGGCGCAGTATGTAATCCCTcc > 2:7925038/1‑149 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCACACCCAAACCCACAACCAAA‑CGGGGAGGGG‑ACCCATCGGCGCGGTATTTAcaaccaca > 2:8449733/1‑143 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAAACCACACCCAAA‑CGGGGAGGGG‑CCCGTTAGGCGCTGGAAGTACTcccccc > 1:6756565/1‑147 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCCCACCCCAAACCACAACCCAA‑CGGCGCGGGG‑ACCCGTAGGCGCGGGATGTACTCCcaca > 2:11803888/1‑150 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGGCCCCGCACCCAAAACCTCTACCTCA‑GGGGGAGGGG‑ACCGTTCGGCGCTGTTTGTACACCCGCAcg > 2:12181280/1‑149 (MQ=255) cGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑a < 2:3771328/150‑1 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGTATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑aaa < 2:929964/150‑1 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑aaa < 1:5811077/150‑1 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑aaa < 1:3769569/150‑1 (MQ=255) gTGCTGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCTTGGCGAAAGGGAATGCGGAATAGTCTTTTGCGCCCCCTCACCCTAACCCTCTCCCTCT‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGa < 1:5548830/150‑1 (MQ=255) gctggggCTGGGTAATGTGTTGCGTGGGGCAGTGGCTCCCTTGGCGAATGGTATTGCGGCATAGTCGTTTGCGCCCCCTCACCATAACCCTCTCCCTCT‑GGGTGTGGGG‑ACCGTTCGGGGCTGTATTTACTCCCTCACTCTT‑AAACGaca < 1:8304304/147‑1 (MQ=255) gCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAAACCACTCCCACA‑GGGAGAGGGG‑CCCGTTCGGCGCAGGGAGTACTACCACACAATG‑AAACGacc > 1:11922402/1‑149 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACAcc < 2:3223697/150‑1 (MQ=255) aGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCCAACCCACACCCACA‑GGGAGAGGGG‑GCCCGTAGGCGCGGTATTTACTGCCACACACTG‑GAACGccaac > 1:6451046/1‑148 (MQ=255) ggggGTGGTTAATGTGTTGCCTGCGGCACTGGCGCCCATGGCGAATGGGATTGCGGATTAGTGGTTGGCGCCCCCTCACCCTAACCCTCTCCCTCT‑GGGTGTGGGG‑ACCGTTCGGCGCTGTTTTTACTCCCTCACTCTG‑AAACGACACCg < 1:10248115/150‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑tttt < 1:1122926/150‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACCCCCAAAACCACTACCTCA‑GGGCGAGGGG‑GCCGGTGGGCGCAGTATGTTATCCCTCAAGATG‑GAAAGACACCCCCCAC‑tttt > 1:9551956/1‑150 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑ttttt < 2:2463989/150‑1 (MQ=255) gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCTAACCCGCAACCACC‑GGGAGAGGGG‑ACCGGTCGGCGCGGTATTTACTCCCACCCTCTG‑AAACGACACCCCCCTC‑ttttttat > 2:6789614/1‑148 (MQ=255) gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCGCACCCAAACCCACTCCCACA‑GGGGGTGGGG‑CCCGGTCGGCGCTGGATGTTATCCCTCACACGG‑TAACGACACCCCACAC‑ttttttta > 2:2888155/1‑149 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGTATAGTCGTGTGCGCCCCCCCCCCCAAACCCACTCCCGCA‑GGGCGGGGGG‑CCCCCTGGGCGCGGGTAGTACTCCCGCACGCTG‑AAACGCCACCGCCCTC‑TGTTTTTCTcc > 2:8810020/1‑150 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTtcgat < 2:8011025/150‑4 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTcc < 1:846208/150‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTTCGCCCCCCCCACCAAAACCACACCCCCC‑GGGTCGGGGG‑GCCCGGCGGCGCGGTATGTAATCACCAAAACCT‑AAACGACACCCCACAC‑ATTTTTTGTcc > 1:1798554/1‑150 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTc < 1:7819487/150‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTc < 1:565808/150‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCCAACCCACACCCACA‑CGGGGAGGGG‑GCCGGTGGGCGCGGTTTGTAAGACCACCCACAG‑AAACCACACCCCCCCC‑attttttatacccc > 1:1539408/1‑143 (MQ=255) ccTGCGGCACTGGCTCCCAGGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTc < 2:1692779/150‑1 (MQ=255) tGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCAGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGc < 1:9919594/150‑1 (MQ=255) cGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGccc < 1:3895282/150‑1 (MQ=255) tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCgg < 2:10523359/150‑1 (MQ=255) tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAAACCACAACCACA‑GGGGGGGGGG‑GACGGTAGGCGCCGTGTGTACACCCCCACACTG‑TAAACACACCGCCCAC‑TTTTTTTCTACCACGCCCCACCgg > 2:3939301/1‑150 (MQ=255) gggCTCCCATGGCGAAAGTTATTGCGGCTTTGTCGTTGCCGCCCCCACACCCTACCCCCATCCCCCT‑GGTAGAGGGT‑ACCTTTGGGCGCTGTTTGTCGCCCCACAAAAGG‑AAACGACACCGAACTC‑TTTTTTTCTCCCTCGCCCCTCCgg < 1:10001155/149‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCggg < 2:4191425/150‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCCAAACCACAACCACA‑CGGTGAGGGG‑CCCCGTAGGCGCGGTATGTAAGACCACACACAG‑AAAACACACCCCACGC‑ATTTTTTTTACCGCCCCCCACCgggg > 2:6372167/1‑150 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGga < 2:4545379/150‑1 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTTCGCCCCCGAACCCCAAACCGCACACGCA‑TGGGGAGGGG‑AACCTTACGCGCAGTATGTACTCCCCCAATCCG‑TAACGCCACCGCACAC‑TTTTTTTCTCCCGCCCCCCACCcgggcg > 2:6939051/1‑148 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 2:11241415/150‑1 (MQ=255) aTGGCGAATGGGATTGCGGCATAGTAGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCC‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCTCCCCGGAGGGGCGAggg < 1:7382368/150‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCGCCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCCG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCTCCCCGGAGGGGCGAggg < 2:9817960/150‑1 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCAAACCCTCACCCACA‑GGGGGAGGGG‑ACCCGTCGGCGCGGTGTGTACTCCCCCACGCAG‑GAAACACCCCGCCCAA‑GTTTTTTCTCCCACGCCCCACCCGGGGGAGGGCCgcg > 2:6504219/1‑148 (MQ=255) aaaGGGAATGCGGAATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgggg < 1:3537036/150‑1 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGt < 1:5075924/150‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCC‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 1:1298005/150‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCACACCCCAAACCACAACCACA‑GGGCGCGGGGCACCG‑TCGGCGGGGTATGTACAACCCCACTCCGCAACCGAC‑CCCCACGA‑GTTTTTTCTGCCTCGCCCCACCGGGGGGGGGGCCGGGGTgg > 2:4777234/1‑149 (MQ=255) gggAATGCGGCATAGGCGTGTGCGCCCCCTCCCCCTACCCCTCGCCCTCA‑GGGAGAGGGG‑CCCGTTCGGCGCGGTATGTACTCCCTCCCTCTG‑AAACGACACCGCACTC‑TTTTTTTCGCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 1:312292/150‑1 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTTTGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 1:4314672/150‑1 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 2:5299732/150‑1 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 2:6649452/150‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:1369058/150‑1 (MQ=255) gAATGCGGCATAGTCGTGGGCGCCCCCTCACCCTAACCCTCTCCCTCC‑GGGAGAGGGG‑ACCGTGCGGCGCTGTAGGGACTCCCTCCCTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:2298268/150‑1 (MQ=255) aaTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg < 2:7782895/150‑1 (MQ=255) gCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaa < 2:11953082/150‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCTCACCCTAACCCACTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaaa < 2:3467923/150‑1 (MQ=255) cATAGTCGTTTGCGCCCCCTCACCCTCACCCTATCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCCCTCTG‑AAACGACACGGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGTGGGCCGGGGTGCGGGGACAAgg < 2:958726/150‑1 (MQ=255) tttGCGCCCCCTCACCCTAACCCAAACCCACA‑GGGAGAGGGG‑ACCCTTCGGCGCAGTAAGTAATCCCTCACAATG‑AAACCACACCGCAAAC‑ATTTTTTAAACCACCCCCCACCGGGGAGAGGGCCCGGGTGAGGGGAAAAGGCCCCAcag > 2:2593186/1‑148 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAc > 2:5500941/1‑150 (MQ=255) ccccTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCa > 2:1495385/1‑150 (MQ=255) ccccTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCAATC‑TTTTTTTCTCCCTCGCACCTCCTGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCa > 2:11542352/1‑150 (MQ=255) ccTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAt > 2:6212623/1‑150 (MQ=255) aCCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGc < 2:10182988/94‑1 (MQ=255) ccTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCCCTGCTCACCAATTTTCTg > 1:2596777/1‑150 (MQ=255) ccTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 1:10791560/1‑150 (MQ=255) ccTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 1:9286493/1‑150 (MQ=255) ccTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 2:11077250/1‑150 (MQ=255) tccccTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTa > 2:7432385/3‑150 (MQ=255) aaCCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTa > 1:2707456/1‑150 (MQ=255) aaCCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTa > 2:1987974/1‑150 (MQ=255) ccccTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTAt > 2:9069296/2‑150 (MQ=255) ctctCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 1:7635235/1‑150 (MQ=255) tctcCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg > 2:10733576/1‑150 (MQ=255) | GTGGCGATGACGCTGACTGGCGCGAAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTC‑TTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTG > NC_000913/3780895‑3781193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |