| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,158 | A→C | 5.3% | intergenic (+141/‑57) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,158 | 0 | A | C | 5.3% | 2661.2 / 55.2 | 845 | intergenic (+141/‑57) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (764/19); new base C (24/37); total (788/57) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.34e-34 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 874 total aligned reads displayed.
GCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATC > NC_000913/3781009‑3781307 | ggCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑aaaa < 2:6433544/150‑1 (MQ=255) gCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAg < 2:2904548/150‑1 (MQ=255) tCGTTTGCGCCCCCTCACCCGAACCCACACCATCAGGGAGAGGGGACCCTTCGGCGCTGTATGTACACCCTCACTCTGAACCGCCACCGCACACTTTTTTTCTCCCTCGCCCCACCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑CCAAGGCCGCa > 2:11599017/1‑150 (MQ=255) tttGCGCCCCCTCACCCTAACCCAAACCCACAGGGAGAGGGGACCCTTCGGCGCAGTAAGTAATCCCTCACAATGAAACCACACCGCAAACATTTTTTAAACCACCCCCCACCGGGG‑‑AGAGGGCCCGGGTGAGGGG‑AAAAGGCCCCAcag > 2:2593186/1‑148 (MQ=255) tttGCGCCCCCACACCCTAAACCACACCCACAGGGAGAGGGGACCGTTAGGCGCAGTATGTAATACCGCACACTGAAACGACACCCCCCAAATTTTTTATACCACGCCCCACCCGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCAcag > 1:8471113/1‑148 (MQ=255) cgcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCCCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCa < 2:10444810/150‑1 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGC‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAAtt < 1:2656354/150‑1 (MQ=255) cTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGc > 1:6540498/1‑150 (MQ=255) tAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCt > 1:5601448/1‑150 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc > 2:2712443/1‑150 (MQ=255) ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 2:1087803/1‑150 (MQ=255) tctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg > 2:5097458/1‑150 (MQ=255) tcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcc > 2:4077592/1‑150 (MQ=255) tgaGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCg > 1:2835445/3‑150 (MQ=255) tCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCg > 1:9496189/1‑150 (MQ=255) aGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCa > 2:1647110/1‑150 (MQ=255) gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa > 1:1618753/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 2:9255361/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 2:1177143/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACAGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:3279826/1‑150 (MQ=255) ggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg > 2:1209777/1‑150 (MQ=255) gACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc > 1:9082376/1‑150 (MQ=255) cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt > 2:4814043/1‑150 (MQ=255) cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt > 1:5251815/1‑150 (MQ=255) cGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGt > 2:2428224/1‑150 (MQ=255) cgcTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa > 1:4988417/1‑150 (MQ=255) tgtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTATCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACa > 2:7697641/1‑150 (MQ=255) gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCAGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACAt > 2:7567690/1‑150 (MQ=255) gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa > 1:4756513/1‑150 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 2:5966827/1‑150 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 1:9292667/1‑150 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 2:7366861/1‑150 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGAGGGCAGTATGCTAAACATCGTACttt > 1:10782807/1‑150 (MQ=255) cccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa > 2:7159354/1‑150 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 1:11144458/1‑150 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTGTAc > 1:1051465/1‑150 (MQ=255) tCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGa > 2:6363524/1‑150 (MQ=255) cACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGaa > 1:7390431/1‑150 (MQ=255) ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg > 1:722111/1‑150 (MQ=255) tGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 1:11915067/1‑150 (MQ=255) acacCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCg > 1:229551/1‑150 (MQ=255) caccccactTTTTTTTTCCCCCGCCCCCCCGGGGGTCGGGGGCGGGGGTGGGGGC‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGc < 2:8011152/143‑1 (MQ=255) cGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa > 1:11340512/1‑150 (MQ=255) cGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa > 2:8755145/1‑150 (MQ=255) cGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa > 1:1361789/1‑150 (MQ=255) gCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGGGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaaa > 1:1208135/1‑150 (MQ=255) tctTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt > 1:7913221/1‑150 (MQ=255) tctTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt > 2:2250389/1‑150 (MQ=255) tctTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt > 2:3252092/1‑150 (MQ=255) tctTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt > 2:3005574/1‑150 (MQ=255) tctTTTTTTCCCCCGCGCCCCGGGGGGT‑‑TGTGGGGGGGGGTGTGGGG‑CCAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt < 2:11202343/150‑1 (MQ=255) ctcttttttCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt > 1:3702610/4‑150 (MQ=255) atttttttCTCCCTCGCCCGTGGGGGG‑‑TGCGGGCGGGGGTGTGGGG‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTg < 2:12273429/149‑1 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGTTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 1:5992406/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAGCAGAAATTCCGCCAAATACTgg > 2:3683774/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 1:3850192/1‑150 (MQ=255) tttttttCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 2:6928890/1‑150 (MQ=255) tttttttCACCCCCGCCCCGGGGGGT‑‑TGTGGGCGGGGGTGTGGGC‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg < 2:8989859/150‑1 (MQ=255) ttttttCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGc > 2:11028922/1‑150 (MQ=255) tttCTCCCTCGCCCCTCGGGGG‑‑TGAGGTCCGGGGTGAGGGT‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAc < 1:8170566/150‑1 (MQ=255) tttCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAc > 2:5419911/1‑150 (MQ=255) gtgccccccCGCCCCGCGGGGG‑‑TGGGGGCGGGGGTGGGGGG‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAc < 2:8229067/145‑1 (MQ=255) ccggcccTCTCCCCGGAGGGG‑‑CGAGGGCCGGGGTGAGGGG‑ACAAGGCCGCACTGCTCACCAATGTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAca > 2:10708874/5‑150 (MQ=255) ctcCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGACCCAGAAATTCCGCCAAATACTGGCAAcatc > 1:12230633/1‑150 (MQ=255) ctcCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGACATTCCGCCAAATACGGGCAAcatc > 1:7564344/1‑150 (MQ=255) cccTCACCCCGGAGGGG‑‑CGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatcat > 1:5456472/1‑150 (MQ=255) ccTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACatcatc > 1:8746268/1‑150 (MQ=255) cTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 2:8423117/1‑150 (MQ=255) cTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 1:4632839/1‑150 (MQ=255) cTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 2:3864723/1‑150 (MQ=255) cTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATATTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACGGGCAACATCATcc > 1:10885097/1‑150 (MQ=255) tCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 1:2116832/1‑150 (MQ=255) tCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 1:4363119/1‑150 (MQ=255) tCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 1:6761832/1‑150 (MQ=255) tCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 2:2099716/1‑150 (MQ=255) tCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 1:2428993/1‑150 (MQ=255) tCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTATACGAACCAGAAAATCCGCCAAATACTGTCAACATCATCCg > 1:3499528/1‑150 (MQ=255) cccTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCtt > 1:11689138/1‑150 (MQ=255) gcggggggg‑‑ggTGGGTCGGTGTGCGGGC‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTTCGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCttt < 1:6183954/145‑1 (MQ=255) cTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 2:10112780/1‑150 (MQ=255) cTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCACCAAATACTGGCAACATCATCCGTCTTTg > 1:5811132/1‑150 (MQ=255) tCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgc > 1:3051748/1‑150 (MQ=255) cgagGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATa > 1:9784248/2‑150 (MQ=255) agGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATAcc > 2:4301941/1‑150 (MQ=255) ggCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCgg > 2:9692269/1‑150 (MQ=255) ggCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCgg > 2:5486695/1‑150 (MQ=255) ggCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCgg > 2:1408499/1‑150 (MQ=255) ggCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCgg > 1:7731540/1‑150 (MQ=255) gCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGc > 1:1017313/1‑150 (MQ=255) gCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGc > 1:10017398/1‑150 (MQ=255) ccGGGGTGCGGGGCACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGc < 2:4463074/150‑1 (MQ=255) gTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGt > 2:1840174/1‑150 (MQ=255) ggg‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCa < 2:6172573/150‑1 (MQ=255) ggg‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCa > 1:6389895/1‑150 (MQ=255) ggg‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCa > 1:1840685/1‑150 (MQ=255) ggg‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCa > 2:9602450/1‑150 (MQ=255) gg‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCat > 2:669079/1‑150 (MQ=255) gg‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCat > 1:4118781/1‑150 (MQ=255) g‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACGAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCata > 2:11949719/1‑150 (MQ=255) g‑AAAAGGACGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCata > 1:7034179/1‑150 (MQ=255) | GCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGG‑‑AGAGGGCCGGGGTGAGGGG‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGCGCTAATACCGGCTTTCGTCTGCATATC > NC_000913/3781009‑3781307 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |