| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 915,226 | T→G | 11.8% | intergenic (‑369/+126) | ybjE ← / ← aqpZ | putative transporter/aquaporin Z |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 915,226 | 0 | T | G | 11.8% | 247.5 / 6.1 | 146 | intergenic (‑369/+126) | ybjE/aqpZ | putative transporter/aquaporin Z |
| Reads supporting (aligned to +/- strand): ref base T (89/31); new base G (5/14); total (95/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.72e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 146 total aligned reads displayed.
GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTT > NC_000913/915088‑915364 | tGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTgcg > 1:1488756/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAAGGGGGCGGCGGCGATTGGCCGCCCCCTgcgc > 1:136611/1‑140 (MQ=17) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTgcgcg > 1:494645/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTgcgcg > 1:128209/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTgcgcg > 1:208213/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTgcgcg > 1:1873414/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTgcgcg > 2:915339/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTgcgcg > 2:83537/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTgcgcg > 1:819122/1‑140 (MQ=32) aGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGAGGGGCCGCCCCCTgcgcg > 1:11732/1‑140 (MQ=17) gcgcGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTc > 2:718669/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCtt > 2:820989/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCtt > 1:94943/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCtt > 1:1489406/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCtt > 1:358113/1‑140 (MQ=32) cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCtt > 1:95013/1‑140 (MQ=32) accgggATGTTACCTCGCGCCCGACCGGGTAGCCTTATGGGATAAGTGGTGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑TGGGGGGGGCGGCGTTTGGCCGCCCCCTGCGCGCTCCTTGCGCCa < 2:1829430/137‑1 (MQ=11) cAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAg > 2:823589/1‑140 (MQ=32) ggATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTgg > 2:939896/1‑140 (MQ=33) ttGTTACCTCGCGCCCGACCCGGTTGCCTTATGGTATATGTCGTGGGCACCGCGCTGCGGCTTTTTTGTTCGCCAGCGCCGGGGGGTGC‑TGGGGGGGGGGGCGTTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCa < 2:1762845/139‑1 (MQ=11) aTGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGAGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCa > 2:1747493/1‑140 (MQ=21) tGTTACCTCGCGCCCGACCCGGTCGCGGTTGGGGCGGGGTCGGGGGCGCCGCGCGGCGGCGTGTGGGTTCGCGAGAGCGCGGGGGTGC‑GGGGGGCGGCGGCGATTGGCGGCCCGCGGCGCGCTCCGTGCGCCGGTGGctg > 2:698840/1‑138 (MQ=2) tGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCaa > 2:298422/1‑140 (MQ=35) tGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGAGAAGGCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCACCCCCTGCGCGCTCCTTTCGCCAGTGGCaa > 1:777597/1‑140 (MQ=255) gTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAat > 2:1638678/1‑140 (MQ=37) ttACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAata > 2:78124/1‑140 (MQ=37) ttACCTCGCCCCCTACCGGTTAGCCTTATGGATTATGTCGTGTCCACGGGCCTGCGGGTATTTTTTTCGACTGTGCCGGGGGGTGC‑TGGGGGCGGGGCCTTTTGGCGGCCCGCTGCGCGCTCCTTGCGCCAGTGGCAata < 2:1568514/140‑1 (MQ=2) ttACCACGCGCCCGACCAGGTATCCGTAAGTGATAAGTCGAGGGAACCGCGCAGAGGCGATTATGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTTTCAGCCCCCTGCGAGATCCTTGCGCCGGAGGCAata > 2:1444305/1‑140 (MQ=11) cgcgCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGc > 2:978727/1‑140 (MQ=255) cgcgCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGc > 2:978448/1‑140 (MQ=255) gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCCGTGGCAATATGTTGCt > 2:1219068/1‑140 (MQ=255) gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCt > 2:486769/1‑140 (MQ=255) gcgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCt > 2:813878/1‑140 (MQ=255) cgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt > 1:1736908/1‑140 (MQ=255) cgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCtt > 1:912183/1‑140 (MQ=255) ccggACCGGGTTGCCGTAAGGTATATGTCGGGGGCACCGCGCTGGGGCGTTTTTGTTCGCATGCGCCGGGGGGTGC‑TGGGGGGGGGGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAg < 2:1852599/137‑1 (MQ=14) aCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCa > 2:726946/1‑140 (MQ=255) aCCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCAGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCa > 1:497557/1‑140 (MQ=255) tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAgcgc > 1:743011/1‑140 (MQ=255) tAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCATGCGCCAGTGGCAAAATGTTGCTTAGCTCATGAAAGGAgcgc > 1:910677/1‑140 (MQ=255) aGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTATCTCATGAAAGGAGCGcaa > 2:224859/1‑140 (MQ=255) gggATACGTGGGGGGCACCGCGCAGGGGCGTTTGTGTTCGCCAGTGCCCGGGGTGGC‑TGGGGGCGGGGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATCTGTTTCTTAGCTCATGTAAGGAGCGcaac < 2:1484153/140‑1 (MQ=17) tAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGATCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCATGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAga > 2:1519360/1‑140 (MQ=255) aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgat > 2:1403100/1‑140 (MQ=255) aGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatg > 2:1344589/1‑140 (MQ=255) aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGaa > 1:670041/1‑140 (MQ=255) aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCGTGCGCCCGTGGCAATATGTTGCGTAGCTCATGAAAGGAGCGCAACAACATGATGaa > 1:1571074/1‑140 (MQ=255) gggCCCGGCGCGGCGGCTTTTTTGTTGGCCAGCGCCGGGGGGTGC‑TGGGGGGGGCGGCGTTGGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 2:542063/140‑1 (MQ=18) gggCCCCGCGCTGCGGGTTTTTTGTTCGCATTCGCCCGGGGGGGC‑GGGGGGGGGGGGCTTGGGGCCGCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGTTGAAt < 2:1545416/140‑1 (MQ=16) gggCAGCGCCCCGCGGCTTTTTTTTTCGTATGAGCCGGGGGGTGC‑TGGGGGCGGGTCGGATGGGCCGCCCCCGGCGCGCTACTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 2:1030123/140‑1 (MQ=255) gggCACGGGGCAGGGGCTTTTTTTTCCGCCTGCGCCCGGGGGTGC‑CGGGGGGGGCGGCTTTGGCCCGCCCCCTCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 2:416933/140‑1 (MQ=18) gggCACGGCGCCGGGGGGTTTTTGTTCGCCTGAGCCGGGGGGTGC‑TGGGGGGGGCGGCGTTTGGCCGCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 2:1544657/140‑1 (MQ=18) gggCACCGGGCTGGGGTTTTTTTTTTCGCCTTAGCCGGGGGGTGC‑TGGGGGCGGCGGTTTTGGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 2:1375411/140‑1 (MQ=18) gggCACCGGGCAGCGGCTTTTTTGTTCGCCTTAGCCCGGGGGTGC‑TGGGGGCGGCGGCGTTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 2:803836/140‑1 (MQ=18) gggCACCGCGCCGGGGTGTTTTTTTCCGCAAGTCCGGGGGGGGGC‑TGGGGGGGCCGGGGTTTGGCCGCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 1:1759636/140‑1 (MQ=16) gggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCGCCTTGCGCCAGTGGCAATATGTTGCATAGCTCAAGTAAGGAGCGCAACAAGATGATGAAt > 1:238601/1‑140 (MQ=255) gggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGAGTGGCCGCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCGTAGCTCAGGCAAGGAGCGCACCAAGAtgatgaca > 2:946441/1‑138 (MQ=18) ggcccccGCGCTGGGGCTTTTTTGTCCGCCTGCGCGGGGGGGTGG‑GGGGGGGGGGGGGTTTGGGCCCCCCCCCCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt < 1:1638678/135‑1 (MQ=16) ccccGCGCTGGGGCTTTTTTGTACGCCTGTGCCGGGGGTGGC‑TGGGGGGGGCGGGTTTTGCCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCaa < 2:1322874/138‑1 (MQ=18) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:1580728/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:589989/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:588812/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:561006/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCGGCGCGCGCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 1:587130/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGAGTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACat > 2:560337/1‑140 (MQ=255) cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGAGC‑AGGGGGCCGCCGCGCTTGGCCGCCCCCTGCGCGCTCCATGCGCCAGGGGCAATATGTTGCTTAGCTCCTGAAAGGAGCGCCACAAGAAGAGGAaacaaccg > 2:425992/1‑138 (MQ=18) cgcgCAGCGGCGAGTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGTTTGGCCGCGCCCTGCGCGCTCCTTGCGCCCGTGGCGTTATGGTGCGTAGCTCATGTCAGGTGCGCAACAAGGTGATGAAtgatctg > 2:921459/1‑134 (MQ=17) cgcAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACatat > 2:466353/1‑140 (MQ=255) cAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCGCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaa > 2:773288/1‑140 (MQ=255) aGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATaac > 2:415938/1‑140 (MQ=255) atgttGTTCGCCCGAGCCGGGGGGTCC‑AGGGGGCGGCGGCGCTTGGCCGCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATCTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACCTATAACAACATCt < 2:1691534/137‑1 (MQ=25) aTTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCt > 2:771332/1‑140 (MQ=255) cGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaaaa > 2:1050962/1‑140 (MQ=255) tgcgcggggggggGC‑TGGGGGGGGGGGCTTTTGGCCCCCCCCTCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc < 1:737413/133‑1 (MQ=37) tgcgcgggggggTGC‑GGGGGGGGGGGGTTTTGGGCCCCCCCCGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc < 1:1125822/133‑1 (MQ=37) tgcgCCGGGGGGTGC‑TGGGGGCGGGGGCGTTTGCCCCCCCCGGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc < 2:340668/137‑1 (MQ=37) cgcgcggggggggGC‑GGGGGGGGGGGGCTCTGGGCCCCCCCCCCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc < 1:88589/133‑1 (MQ=37) cgcgCCGGGGGGTGC‑TGGGGGCGGGGGCTTTTGGCCCCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc < 1:688534/137‑1 (MQ=37) gtgCCGGGGGGTGC‑TGGGGGGGGGGGCTTTGGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt < 1:1755066/138‑1 (MQ=37) gcgggggggggTGC‑TGGGGGGGGGGGGGTTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCt < 1:915339/134‑1 (MQ=37) cccGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTTCGCCAGTGGCAATATTTTGCTTATCTCATGAAAGGAGCGCAACAAGATTATGAATCAACATATAAAAACATCTTAAAAAAAGGCCTGaa > 1:1533414/1‑139 (MQ=37) cggggggTGC‑TGGGGGGGGCGGCGTTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa < 1:962684/138‑1 (MQ=255) cggggggTGC‑GGGGGGGGGGGGGTTTTGGCCCCCCCTGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa < 1:1491421/138‑1 (MQ=37) gggTGC‑TGGGGGGGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTAc < 2:792458/140‑1 (MQ=255) gtcggccgggggCCGCTGCCACTCGCCCCCACCTCCGCCCTCCTTGCTCCAGAGGCTCGATTATGCGTATCTCAATACAGCACCGCAACAACCTGAAGAAACAACAAATAACAACCTCTTAAAAAAAGGCCTGACATCAc < 2:1922323/133‑1 (MQ=255) gggggggggggggggGCGTTGGGCCGCCCCCTCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGc < 1:1607590/135‑1 (MQ=255) c‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAg > 2:277558/1‑140 (MQ=255) ggggCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGcc > 2:1819056/1‑140 (MQ=255) gggggcggcgTTTGGCCGCCCCCCCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTGGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCtt < 1:706859/137‑1 (MQ=38) ggcggcggcGAATGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCACATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCATAAAAAAAGGCCTGACATTACGCCAGGCCtt > 2:86935/1‑140 (MQ=255) cggcggcgATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCt > 1:434059/1‑140 (MQ=255) ggcggcgATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 1:611855/1‑140 (MQ=255) ggcggcgATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 2:1145546/1‑140 (MQ=255) ggcggcgATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 1:512564/1‑140 (MQ=255) ggcggcgATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGGTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg > 1:514278/1‑140 (MQ=255) cggctATGGGCCGCCCCCTCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCg < 1:776852/140‑1 (MQ=255) taTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaa < 2:910677/139‑1 (MQ=255) ggCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAA‑GCCTGACATTACGCCAGGCCTTCTGCGTtaattaat > 1:1823795/1‑140 (MQ=255) ccccCGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGc < 2:100728/140‑1 (MQ=255) cTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCTACAAGCTGATGTATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCttt < 2:677632/140‑1 (MQ=255) | GCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGC‑AGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAATTAATCACGCTTT > NC_000913/915088‑915364 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |