Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,470,427 C→A 18.4% Q433K (CAA→AAA)  gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,470,4270CA18.4% 303.5 / 14.1 122Q433K (CAA→AAA) gtrSserotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
Reads supporting (aligned to +/- strand):  ref base C (25/70);  new base A (19/8);  total (44/78)
Fisher's exact test for biased strand distribution p-value = 6.18e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 123 total aligned reads displayed.

GTAGTATCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATG  >  NC_000913/2470280‑2470574
                                                                                                                                                   |                                                                                                                                                    
gtagtaTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCaa                                                                                                                                                    <  2:1517509/150‑1 (MQ=255)
 tagtaTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCaaa                                                                                                                                                   <  1:277494/150‑1 (MQ=255)
    taTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGaa                                                                                                                                                <  1:1244184/150‑1 (MQ=255)
      tctcTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCTTTCGACCTTTGCTTATAAATAACATTCGTTTTTTTAATTTATAAAATAATTaaaaaaaaa                                                                                                                                              >  1:883821/1‑149 (MQ=255)
      tctcTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAAAAATTAAAAGaaaa                                                                                                                                              >  1:471473/1‑149 (MQ=255)
        tctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCa                                                                                                                                            <  2:876659/150‑1 (MQ=255)
         ctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGAAATCaa                                                                                                                                           >  1:1509730/1‑150 (MQ=255)
                gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACGTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATa                                                                                                                                    <  2:974356/150‑1 (MQ=255)
                gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATa                                                                                                                                    <  2:568670/150‑1 (MQ=255)
                gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATa                                                                                                                                    <  1:2343549/150‑1 (MQ=255)
                 aaTATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAg                                                                                                                                   <  2:615948/150‑1 (MQ=255)
                 aaTATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAg                                                                                                                                   <  2:2042933/150‑1 (MQ=255)
                 aaTATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAg                                                                                                                                   <  2:2042914/150‑1 (MQ=255)
                 aaTATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAg                                                                                                                                   <  2:1827632/150‑1 (MQ=255)
                 aaTATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAg                                                                                                                                   <  2:1827630/150‑1 (MQ=255)
                    atCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGa                                                                                                                               <  1:1150894/150‑1 (MQ=255)
                    atCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGa                                                                                                                               <  2:1217258/150‑1 (MQ=255)
                    atCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGa                                                                                                                               <  1:2689263/150‑1 (MQ=255)
                    atCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGa                                                                                                                               <  2:1289055/150‑1 (MQ=255)
                    atCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGa                                                                                                                               <  1:2495246/150‑1 (MQ=255)
                     tctcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGAt                                                                                                                              <  2:683766/150‑1 (MQ=255)
                     tctcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAAAAAAAAAATACAATAT‑Cgct                                                                                                                              >  1:2142197/1‑148 (MQ=255)
                     tctcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATAAAATAAAAAAAGACAAAAG‑CGAt                                                                                                                              >  1:2470973/1‑150 (MQ=255)
                       tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAAATTATAAAAAAAAACAAAAAAAACAAAACAAAAG‑ccaagt                                                                                                                            >  2:2340037/1‑145 (MQ=255)
                         aaTTTTATGTGTCATTGTTCGGGGAAGGATATAGAGAATTAAGCAAGCATTTATTTGGAATGTATTTTTCTTTCGACCATTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTaa                                                                                                                          <  1:1854021/150‑1 (MQ=255)
                             ttATGTGTCATTTTTCGGGGAAGGAGATAGAGATTTCAGCAAGCATTTCTTTGGCATGGGGTGTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAGATAAGTCTAAGAAGACAATACAATTG‑CGAAGTGAAGCa                                                                                                                      >  2:1534749/1‑150 (MQ=255)
                              tATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCAc                                                                                                                     <  2:1569581/150‑1 (MQ=255)
                                 gtgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGGATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGTTGTAAAGCTCTaa                                                                                                                  <  2:731000/150‑1 (MQ=255)
                                  tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTTTAAAATAATTAAAAGAAATAAAGAAAAAAA‑CCAAGTAAAGCACAAAg                                                                                                                 >  1:2149683/1‑150 (MQ=255)
                                  tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAg                                                                                                                 <  1:1560490/150‑1 (MQ=255)
                                  tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTCAAAGAAATCAAGACAAAAG‑CGATGTAAAGCACTAAg                                                                                                                 >  2:1467923/1‑150 (MQ=255)
                                  tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAAATTATAAAAAAAATCAAAGCAAACAACACAAAAG‑CGATGTAAAGCACGAAg                                                                                                                 >  2:719964/1‑150 (MQ=255)
                                    tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGtt                                                                                                               <  1:2672429/150‑1 (MQ=255)
                                    tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGtt                                                                                                               <  1:429056/150‑1 (MQ=255)
                                    tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGtt                                                                                                               <  1:428990/150‑1 (MQ=255)
                                    tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGtt                                                                                                               <  1:428985/150‑1 (MQ=255)
                                      aTTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAATAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTa                                                                                                             >  2:2216876/1‑150 (MQ=255)
                                      aTTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATCAAATAAATCAAGACAAAAG‑CGATGTAAAGCACTAAGTTTa                                                                                                             >  2:901358/1‑150 (MQ=255)
                                       tttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGAAATCAAGAAAAAAG‑CGATGTAAATCACTAAGTTTaa                                                                                                            >  2:1382147/1‑150 (MQ=255)
                                       tttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTAAAAAAAAAATAAAAGAAAAAAAAAAAAAAT‑CCATTTAAAGCACGAAGATTat                                                                                                            >  2:1173736/1‑149 (MQ=255)
                                       tttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACATTTGCTTATACATAACAGTCGTTTTTTTAAATTATAAAATAATACAAAGAAAAAAACACAAAAG‑CGAGGTAAAGCACAAAGTTTaa                                                                                                            >  2:1173737/1‑150 (MQ=255)
                                        ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTaaa                                                                                                           <  2:308201/150‑1 (MQ=255)
                                        ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTaaa                                                                                                           <  1:1199075/150‑1 (MQ=255)
                                        ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTaaa                                                                                                           <  1:1859374/150‑1 (MQ=255)
                                        ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTaaa                                                                                                           <  2:2042314/150‑1 (MQ=255)
                                           tCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTg                                                                                                        <  2:11966/150‑1 (MQ=255)
                                           tCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTg                                                                                                        <  2:2079887/150‑1 (MQ=255)
                                             ggggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTgcg                                                                                                      <  2:392112/150‑1 (MQ=255)
                                             ggggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAAACAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTgcg                                                                                                      <  2:159780/150‑1 (MQ=255)
                                             ggggAAGGATATAGAGATTGAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTgcg                                                                                                      <  2:1948295/150‑1 (MQ=255)
                                                  aGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCa                                                                                                 <  1:2519512/150‑1 (MQ=255)
                                                           agaTTTAAGCAAGCATTTATTTGGAATGTAATTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgcg                                                                                        <  1:687429/150‑1 (MQ=255)
                                                             aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgcgcg                                                                                      >  2:2283436/1‑150 (MQ=255)
                                                             aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATAAAATAAAAAAAAAAAAAAG‑CGATGTAAATCACAAAGTTTAAATTTCGCGCCAAAAATTgcgcg                                                                                      >  2:1286770/1‑150 (MQ=255)
                                                              tttAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAATAAATCAAGACAAAAG‑AGATGTAAAGCACGAAGTTTAAATTTAGAGCCAATCATGgcgcgc                                                                                     >  2:1827382/1‑150 (MQ=255)
                                                                 aagcaagcATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAATAAATAAATAAAAAAT‑AGATTTAAATCAAAAAGTTTAAATTTCGCGCCAAACAGGGGGCGcacc                                                                                  >  1:1417953/1‑149 (MQ=255)
                                                                    caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAATAAATAAATACAAAAG‑CGATGTAAAGCACTAAGTTTTAATTTCGCGCCAATCAAGGCGCGCACACGc                                                                               >  2:522623/1‑150 (MQ=255)
                                                                    caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGAAAAAAAGAAAAAAT‑CGATGTAAATCACAAATTTTAAATTTATCGCCACTCAAGGCGCGCACaaac                                                                               >  1:2024111/1‑148 (MQ=255)
                                                                    caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAATAAATAAAGAAAAAAG‑CGATTTAAATAACTAAATTTAAATTTAGCGCCAAAAAAGGCGCGCACAAGc                                                                               >  2:522613/1‑150 (MQ=255)
                                                                    caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATAAAAGAAATCAAAAAAATAGACGTTG‑AAAGCCAGAAGTTTAAATTTCGCGGCCATAATGGGGCGCACAAGc                                                                               >  1:1391803/1‑150 (MQ=255)
                                                                        caTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAAG‑CGATGTAAATCACTAAGTTTAAATTGCGCGCCAATCAAGGCGCGCACAATCtaaa                                                                           >  2:1458212/1‑148 (MQ=255)
                                                                        caTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAATAAATCAAGACAATAG‑CGATGTAAAGCAATAAGTTTAAATTTCGCGCCAATAATTGCGCGCACAAGCtata                                                                           >  2:926596/1‑150 (MQ=255)
                                                                          tttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTTTAAAAAAAATAAAAAAAAAAAACAAAAAAT‑CGAAGTAAAGAACAAAGGTTAAATTTAACGCCCAACATGGCCCCCACAAGATaaaaa                                                                         >  1:1973362/1‑149 (MQ=255)
                                                                              tttGTATTGTATTTTTCTTTCGACCTTTGATTATACATAACATTCGTTTTTTTATTTTATAAAATAATTCAAATAAATCAAGAAAATCG‑CGATGTAAAGCAATAAGTTTAAATTGCGCGCCAATCAGGGCGCGCACAAGCTATAATACCa                                                                     <  1:2041376/150‑1 (MQ=255)
                                                                              tttGGAATTTTTTTTTATTTCTAACTTTGCTTATACATAAATGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATAAAGACAATTG‑CGATTAAAAGCACTATGTTTAATTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCa                                                                     <  1:2041190/150‑1 (MQ=255)
                                                                                     tttttttttCGTTCGACGTTTGCTTATACATAACTGTGGTTTTTTTATTTTATAAAATATTTCAAAGAAATCAAGACATTAG‑CGATGTAACGCACTATGTTTAATTTGCGCGCCAATCTGGGCGCGCACAAGCTATAATACCAACCTAAt                                                              <  1:1086569/146‑1 (MQ=255)
                                                                                     tttttttttCGTTCGACATTTGATTATACATAACTTTTTTTTTTTTATTTTATAAAATAATTCAAATAAATAAATACATTAG‑CTATTTAAAGCAATAATTTTAAATTGCGCGCCAATCTTGGCGCGCACAAGCTATAATACCAACCTAAt                                                              <  1:884422/146‑1 (MQ=255)
                                                                                     tttATTTTTCTTTCTAACTTTTCTTATAAATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATTTAAAGCACTAATTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAAt                                                              <  1:1803199/148‑1 (MQ=255)
                                                                                     tGTATTTTTCGTTCTACATTTTCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAAt                                                              <  1:1071024/150‑1 (MQ=255)
                                                                                     tGTATTTTTCGTTCGACCTTTGATTATAAATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAATAAATCAAGAAAATAG‑CTATGTAAATCACTATGTTTAAATTGCGCGCCATTCATGGCGCGCACAAGCTATAATACCAACCTAAt                                                              <  1:78294/150‑1 (MQ=255)
                                                                                      ttATTTTTCGTTCTACATTTGCTTATAAATAACAGTCTTTTTTTTAATTTATAAAATAATTAAAAGAAATCAAGAAAATAG‑CTTTTTAAAGCACTAATTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAAtt                                                             <  1:1259764/149‑1 (MQ=255)
                                                                                      gTATTTTTGGTTCGACCTTTTCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAATAAATCAACACAATCG‑CGATGTAAAGCACTATTTTTAAATTGCGCGCCAATCTGGGCGCGCACAAGCTATAATACCAACCTAAtt                                                             <  1:1259767/150‑1 (MQ=255)
                                                                                        aTTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtc                                                           <  2:134687/150‑1 (MQ=255)
                                                                                        aTTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtc                                                           <  2:478554/150‑1 (MQ=255)
                                                                                        aTTTTTCGTTCGACCTTTGATTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAATAAATAAAGAAATTAG‑CTATTTAAAGAACTAATTTTAATTTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtc                                                           <  1:1361823/150‑1 (MQ=255)
                                                                                        aTTTTTCATTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtc                                                           <  2:390136/150‑1 (MQ=255)
                                                                                         tttttCTTTCGACATTTGCTTATACATAACAGTCTTTTTTTTATTTTATAAAATAATTCAAAGAAATCAAGACAATAT‑CTATTTAAAGAACTAAGTTTAAATGGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtct                                                          <  1:534803/150‑1 (MQ=255)
                                                                                          ttttCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtctc                                                         <  2:1509730/150‑1 (MQ=255)
                                                                                                       tttGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGt                                            <  1:827912/150‑1 (MQ=255)
                                                                                                       tttGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAATAAATCAAGAAAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGt                                            <  1:828015/150‑1 (MQ=255)
                                                                                                           cTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACt                                        <  2:1468182/150‑1 (MQ=255)
                                                                                                           cTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACt                                        <  2:2629096/150‑1 (MQ=255)
                                                                                                                   tAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGTAATAAAGACAATAT‑CGATGTAAAGCACTAAGTTTAAATTTCGCGCCTATCATGGCGCGCACAAGCGATAATTCCAACCTAATTTCTCCTCCTCTTTGGGTGACTATATGTcc                                >  2:1796011/1‑150 (MQ=255)
                                                                                                                   tAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATAAAGACAAAAG‑CGAAGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCAAATTTCTCCTCCTCATAGAGTGACGATATCTcc                                >  2:2003520/1‑150 (MQ=255)
                                                                                                                    aaCAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCt                               <  2:1107573/150‑1 (MQ=255)
                                                                                                                    aaCAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCt                               <  2:2072498/150‑1 (MQ=255)
                                                                                                                          cGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGa                         <  2:2470973/150‑1 (MQ=255)
                                                                                                                            tttttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAAt                       >  1:1893131/1‑150 (MQ=255)
                                                                                                                                tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                   <  2:1933031/150‑1 (MQ=255)
                                                                                                                                tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                   >  2:1987993/1‑150 (MQ=255)
                                                                                                                                tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                   >  2:1475428/1‑150 (MQ=255)
                                                                                                                                tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                   <  1:698886/150‑1 (MQ=255)
                                                                                                                                tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACAATATCTCCTGATAGAATTGCg                   >  1:2544947/1‑150 (MQ=255)
                                                                                                                                tttAATTTATAAAATAATTAAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                   <  1:1162959/150‑1 (MQ=255)
                                                                                                                                        ataAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGAc           >  1:2106914/1‑150 (MQ=255)
                                                                                                                                        ataAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGAc           >  1:27784/1‑150 (MQ=255)
                                                                                                                                         taAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACt          >  1:2032941/1‑150 (MQ=255)
                                                                                                                                         taAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGAACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACt          >  2:723261/1‑150 (MQ=255)
                                                                                                                                               aatTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCaaa    <  1:569658/150‑1 (MQ=255)
                                                                                                                                                 ttCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATg  <  1:1264054/150‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GTAGTATCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAG‑CGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATG  >  NC_000913/2470280‑2470574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑