| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,466,336 | C→G | 9.0% | pseudogene (945/2513 nt) | ydbA → | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,466,336 | 0 | C | G | 9.0% | 722.9 / 45.0 | 224 | pseudogene (945/2513 nt) | ydbA | pseudogene, autotransporter homolog; interrupted by IS2 and IS30 |
| Reads supporting (aligned to +/- strand): ref base C (103/98); new base G (9/12); total (114/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 253 total aligned reads displayed.
ATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGA > NC_000913/1466187‑1466485 | aTTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcaccggcacc < 2:859483/150‑1 (MQ=255)aTTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTggcaccggcacc < 2:1219214/150‑1 (MQ=255) tGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCa < 1:4589735/150‑1 (MQ=255) aCCGGTGACAGCGCGACGGTGGATAACAAGGGCACCGTGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAAt < 2:1054817/150‑1 (MQ=255) aCCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAAt < 1:4370437/150‑1 (MQ=255) aCCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAAt < 2:3643765/150‑1 (MQ=255) ggTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGt < 2:2271033/150‑1 (MQ=255) gTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGAGACCAGGCCATAGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATAAAAGGtg > 1:3701122/1‑150 (MQ=14) tGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGtga < 2:4776793/150‑1 (MQ=255) cAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGtgatga < 1:3583369/150‑1 (MQ=255) aGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGAc < 1:3850793/150‑1 (MQ=255) ggTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGc < 1:4595658/150‑1 (MQ=255) ggATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCaaa < 1:3209436/150‑1 (MQ=255) gATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaac > 2:3810650/1‑150 (MQ=255) aTAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaaca > 1:2612574/1‑150 (MQ=255) tAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacaa < 2:1094508/150‑1 (MQ=255) aCAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacaaca < 1:1123628/150‑1 (MQ=255) aCAAGGGCAACATGACCTTCACAGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGAACCATAACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacaaca < 2:664302/150‑1 (MQ=18) cAAGGGCACCATGACCGTCACCGATCCGGTGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacaacaa < 1:1793900/150‑1 (MQ=255) cAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacaacaa < 1:2888536/150‑1 (MQ=255) cAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacaacaa < 1:1916045/150‑1 (MQ=255) aaGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAaacaacaac < 1:2828144/150‑1 (MQ=255) aGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACg < 2:5114088/150‑1 (MQ=255) ggCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGc > 1:2593028/1‑150 (MQ=255) cACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCaa < 2:3294451/150‑1 (MQ=255) aCCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAaacaac < 2:2429014/141‑1 (MQ=255) aCCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAaacaac > 1:2429014/1‑141 (MQ=255) aCCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCaaa > 1:5562104/1‑150 (MQ=255) cATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCCCCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAac > 1:5030757/1‑150 (MQ=255) cATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCAGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAac > 2:2651195/1‑150 (MQ=255) ccGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑Cg > 1:603019/1‑150 (MQ=255) tCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATgg < 1:4207927/109‑1 (MQ=255) aCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGtgatg < 2:323358/112‑1 (MQ=255) aCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGAc > 2:1589924/1‑150 (MQ=255) aCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGAc < 2:5583375/150‑1 (MQ=255) aCCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGAc > 1:3439927/1‑150 (MQ=255) cGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAaccac > 1:3547774/1‑141 (MQ=255) cGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAAAGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACgg > 1:3683110/1‑150 (MQ=255) cGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACgg > 1:4033026/1‑150 (MQ=255) cGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACgg > 1:4792462/1‑150 (MQ=255) cGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAAGGGTGATGACGCCACGCCAAACAACAACCGCAAAACCAC‑CGTTCACgg > 1:3352715/1‑150 (MQ=255) ggAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGa > 2:1931773/1‑150 (MQ=255) gAGTCGATGGGTATCCAGATCGACGGTGTCCAGGCCCTCGTCTCTAACGTAGGCGAGAGGACCCTCACGAACGGTGGCCCCGGCACCGAGATTACTGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGAt < 2:3154401/150‑1 (MQ=17) gAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGAt < 2:2037086/150‑1 (MQ=255) gTCCATGGGTATCCAGAGCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTc < 1:1062810/150‑1 (MQ=255) ccATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCa > 1:1561154/1‑150 (MQ=255) aTGGGTATCCAGATCGACGGTGACAAGGCCATTGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCAcc > 2:1977623/1‑150 (MQ=255) aTGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCAcc > 1:1084619/1‑150 (MQ=255) aTGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCACACAACCACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCAcc > 2:4184712/1‑150 (MQ=255) aTGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCAcc < 2:3485921/150‑1 (MQ=255) tGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGGGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCg < 2:580891/150‑1 (MQ=255) tGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCg < 1:5250042/150‑1 (MQ=255) gggTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGa < 2:2609610/83‑1 (MQ=255) gTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTa > 2:1314650/1‑150 (MQ=255) tATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTAc < 1:5042926/150‑1 (MQ=255) aTCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACg < 1:2476961/150‑1 (MQ=255) ccAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGa > 2:4720783/1‑150 (MQ=255) ccAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGa > 1:1439955/1‑150 (MQ=255) ccAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGa > 2:618515/1‑150 (MQ=255) ccAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGa > 1:542483/1‑150 (MQ=255) cAGATCGACGGTGACAAGGACATCGTCAATTACGAAGGCGAGAGCACCATCACCAACGGTGGCTCCGGCACCCTGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGaa < 1:559327/150‑1 (MQ=255) aGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTaac < 2:1376400/80‑2 (MQ=255) aGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGaaa > 1:4820275/1‑150 (MQ=255) aTCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGTCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATc < 2:2900220/150‑1 (MQ=255) aTCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATc > 1:4292735/1‑150 (MQ=255) gACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAAttgct < 2:4033026/150‑5 (MQ=255) gACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAAttgct < 2:3683110/150‑5 (MQ=255) gACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAAttgct < 2:1813289/150‑5 (MQ=255) cGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCGCCATCACCAACGGTGGCACCGGCACGCAGATTAACGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAAttgctgg < 2:5626527/150‑7 (MQ=11) aCAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGtaata > 2:5324546/1‑150 (MQ=255) aGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACg < 1:1466943/150‑1 (MQ=255) aTCGTCAATAACGAAGGCGAGAGCACCATCACCACCGGTGGCGCCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGaaaa < 2:4811108/150‑1 (MQ=255) aTCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAAAGGTGATGACTCCACGGCAAAAAACAACTGCAAAAACAC‑CTTTGACTGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGaaaa > 1:5297369/1‑150 (MQ=17) tCGTCAATAACGAAGGCGAGAGCTCCATCACCAACGGTGGCACCGGCACGCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAAt < 2:4661718/130‑1 (MQ=255) tCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAAt > 1:4661718/1‑130 (MQ=255) tCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAAt > 1:216890/1‑130 (MQ=255) gTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAAAGGTGATGACTGCGCAGCACACAACAACTG‑AACTCCACACGCTCACGGAGAGCAGTCAAGCGGTCCGGAGATCTACGGTAATAACggtcgagtg > 1:1495738/1‑143 (MQ=9) gTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAAAGGTGATGACGCCACGGCAAAAAACAACTGAAAAACCAA‑CGATCACGGAAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGtt > 1:2280558/1‑150 (MQ=17) tCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACgg > 1:5805309/1‑123 (MQ=255) tAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCa > 1:90540/1‑150 (MQ=255) aaCGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAg < 1:938601/150‑1 (MQ=255) aaCGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAg > 1:4721855/1‑150 (MQ=255) aaCGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAg < 1:1353811/150‑1 (MQ=255) cGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGa < 2:2593028/150‑1 (MQ=255) gagaGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGAt < 2:3131620/150‑1 (MQ=255) agCACCATCACCAACGGTGGCACCGGGACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCTCCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTg < 1:5421159/150‑1 (MQ=255) ccATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATAAACGGAAATAACGGGAATGTTATTCAGGACGGCGATCTGGATg > 1:5673540/1‑150 (MQ=255) aTCACCATCGGTGGCAGCGGCATCGAGATTACTGGTGATGACGCCACTGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTc < 2:5030572/150‑1 (MQ=17) aCCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGaaa > 1:2347867/1‑100 (MQ=37) cGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAgcggcgg < 2:5417458/150‑1 (MQ=255) tGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGcggcggcgg > 2:4534602/1‑150 (MQ=255) tGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGcggcggcgg > 2:1420320/1‑150 (MQ=255) gcaccggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCa > 1:4027581/1‑69 (MQ=40) gcaccggcaccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCa < 2:1559653/69‑1 (MQ=40) caccGAGATTACGGGTGATGACGCCACGGAAAACAACAAAGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTAt < 2:434000/150‑1 (MQ=14) caccCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTAt < 1:3810650/150‑1 (MQ=255) accCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCaa < 1:3057066/62‑1 (MQ=40) accCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTAtt < 2:4792462/150‑1 (MQ=255) ccAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGAGGTCAGCGGCGGCGGTCACGGTATTGa > 2:2167420/1‑150 (MQ=255) ccAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAAAAAAGGAAAAGGTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATAGa > 2:5592365/1‑150 (MQ=255) | ATTGATATCACCGGTGACAGCGCGACGGTGGATAACAAGGGCACCATGACCGTCACCGATCCGGAGTCCATGGGTATCCAGATCGACGGTGACAAGGCCATCGTCAATAACGAAGGCGAGAGCACCATCACCAACGGTGGCACCGGCACCCAGATTAATGGTGATGACGCCACGGCAAACAACAACGGCAAAACCAC‑CGTTGACGGCAAGGATTCCACCGGTACGGAAATCAACGGTAATAACGGAAAAGTTATTCAGGACGGCGATCTGGATGTCAGCGGCGGCGGTCACGGTATTGA > NC_000913/1466187‑1466485 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |