| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,570,714:1 | +T | 6.1% | coding (606/1974 nt) | glgX ← | glycogen debranching enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,570,714 | 1 | . | T | 6.1% | 320.7 / 17.0 | 82 | coding (606/1974 nt) | glgX | glycogen debranching enzyme |
| Reads supporting (aligned to +/- strand): ref base . (39/38); new base T (3/2); total (42/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.67e-01 | |||||||||||
GCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAA > NC_000913/3570566‑3570862 | gCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTAGTTAGCCCCATGCGTTGCAGACGGGGGTCACTGGCAAACTgc > 1:172146/1‑149 (MQ=255) aGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTgc‑gc < 1:861792/149‑1 (MQ=255) aGTGCTTTGATTGCATCGCGAAACTACTACAGCGCCGTCTCTGGCTAGCAGGCAAACGCCGGATCCAGCGCAAACATCGCCACCGGGTTGTAACCACAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTgc‑gc < 1:1124125/149‑1 (MQ=255) gATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGgca > 2:739772/1‑149 (MQ=255) gATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGgca > 1:152116/1‑149 (MQ=255) aTTGCATCGCGAAACTCATCCCGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGGTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTTGCAAACTGC‑GCCACTGgcag < 2:466704/149‑1 (MQ=255) ttGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCAACCGGGTTGTAACCCCAGTAGTTACTTAGACCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGgcagc > 1:572915/1‑149 (MQ=255) cATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGt < 1:4634/149‑1 (MQ=255) aTCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACAACAGTAGTTTCTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGtt > 2:17763/1‑149 (MQ=255) aTCGCGAAACTCATCCAGCGCCGGTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGtt < 1:273686/149‑1 (MQ=255) tCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCTGCCAGTGGC‑GCAGttt < 2:287208/149‑2 (MQ=255) tCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTc > 2:1171762/1‑149 (MQ=255) cgAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGGGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAg > 1:805179/1‑149 (MQ=255) gAAACTCATACAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGATGCAGACGTGGTTCACTGGCAATCTGC‑GCCACTGGCAGCAGTTCCAgc > 2:19512/1‑149 (MQ=255) aaCTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGCTGCCAGTGGC‑GCAGtttgccagt < 2:1119194/149‑8 (MQ=255) aCTCATCCAGCGCCGTTTCTGGCGAGCAGGTATCCGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGAGGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGcgcg > 1:910050/1‑149 (MQ=255) aCTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGcgcg < 2:1061158/149‑1 (MQ=255) aCTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGcgcg > 1:788779/1‑149 (MQ=255) cAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGc > 2:310354/1‑149 (MQ=255) cAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGc > 1:310904/1‑149 (MQ=255) gcCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCTCCGGGTTGTAACCCCAGTAGTTACTTAGCCCCTGGCGTTGCAGACGTGGTGCACTGGCAAACTGA‑GCCACTGGCAGCAGGTCCAGCGCGGTACTGCCCaa > 2:515362/1‑149 (MQ=255) ccGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGCGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAAt > 2:565733/1‑149 (MQ=255) cGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAAtt < 2:751652/149‑1 (MQ=255) gTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGTTTGTAACCACAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTTTCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTg < 1:166212/149‑1 (MQ=255) tttCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGt < 1:369425/149‑1 (MQ=255) tttCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGt > 1:1135214/1‑149 (MQ=255) ttCTGCCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCTCCGGGTTGTAACCCCAGTAGTTCCTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGtt < 2:1093027/149‑1 (MQ=255) tCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGttt < 1:725426/149‑1 (MQ=255) cTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTc < 1:111632/149‑1 (MQ=255) gCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCGAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCaaa < 1:167272/149‑1 (MQ=255) gCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCaaa < 1:468460/149‑1 (MQ=255) gCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCaaa < 2:458064/149‑1 (MQ=255) cAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGtt < 2:503581/149‑1 (MQ=255) ggCATTCGCCGGATGCAGCGCTATCATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGa < 1:863425/149‑1 (MQ=255) ggCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGa < 1:268016/149‑1 (MQ=255) gCATACGCCGGATGCAGCGCAACCATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGat > 2:553772/1‑149 (MQ=255) gCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCAc > 1:571441/1‑149 (MQ=255) cGGATGCAGCGCACACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTATTGGCCAATTGTTTCAAATAGTTGATCATCACCg > 1:640180/1‑149 (MQ=255) ggATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGAGCGGTAATGACCAATTGTTTCAAATAGTTGATCATCACCgg > 2:1122277/1‑149 (MQ=255) gATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGa < 1:352793/149‑1 (MQ=255) aGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGGTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGccc < 2:310904/149‑1 (MQ=255) aGCGCAAACATCGCCACCGGGGTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGccc < 1:264431/149‑1 (MQ=255) gcAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAg > 2:29628/1‑149 (MQ=255) cAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAgg < 1:860225/149‑1 (MQ=255) cAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAgg > 1:619549/1‑149 (MQ=255) ccACCGGGTTGTAACCCCAGTAGTTAATTAGCCCCATGCTTTGCAGACCGGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCTCGGTAATGCCCAATTGTTTCAAATAGTTGATAATCACCGCATGCCCGAGGGCTTTATaa > 2:895677/1‑149 (MQ=255) gggTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGcc < 1:615374/149‑1 (MQ=255) ggTTGTACCCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGccc > 1:465184/1‑148 (MQ=255) gTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCAc < 2:3442/149‑1 (MQ=255) tGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCTCTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACgg > 2:196875/1‑149 (MQ=255) cgcctgtagtTACTTTGCCGCTTGCGTTGGTGAAGTGGTTCAGTGGGAAACTGC‑GCCACTGGCAGCAGGTCCAGCGCGGTAATGCCCAATTGTGTCAAATCGTGGATCATCAGCGGATGCCCGAGGGCTTTATAAGTGCCACGGAtctc < 2:784169/144‑1 (MQ=255) cccAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCg > 1:466927/1‑149 (MQ=255) cAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGAc > 1:287203/1‑149 (MQ=255) cAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGAc < 2:303409/149‑1 (MQ=255) tagtTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTGCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGTCCGAGGGCTTTATAAGTGCCACGGATCTCGCCCgg > 1:788021/1‑149 (MQ=255) agtTTCTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAAGTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCAGCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCggg < 1:528115/149‑1 (MQ=255) gtTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCCATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGa > 2:851587/1‑149 (MQ=255) gtTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATAATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGa > 2:305028/1‑149 (MQ=255) ttACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCTAACTTC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGAt < 2:958167/149‑1 (MQ=255) aCTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTGCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGAGCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGCCCGGGAtct > 2:1068881/1‑149 (MQ=255) tAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCg < 2:208435/149‑1 (MQ=255) tAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCg < 1:28626/149‑1 (MQ=255) gcaccATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCTGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCggg < 2:361570/146‑1 (MQ=255) aggCGTGGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGGTCCAGCGCGGTAATGCCCAATTGATTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCaa < 2:711077/147‑1 (MQ=255) aTGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCaa < 1:739772/149‑1 (MQ=255) gTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTAc < 1:279540/149‑1 (MQ=255) gTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTAc > 2:737213/1‑149 (MQ=255) ttGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACg < 2:329904/149‑1 (MQ=255) tGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGt < 1:718452/149‑1 (MQ=255) tcAGACGTGGATCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAACTAGTTGATCATCACCGGCTGCCCGAGGGCTTTATAAGTGCCACGGAGCTCGACCGGTATCTCCGGGTGCAAGTACGtt < 1:396271/148‑1 (MQ=255) aGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCCCCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTaa > 1:417064/1‑149 (MQ=255) aCGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATc < 2:1154204/149‑1 (MQ=255) aCGTGGTTCACGGGCAAACCGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATc < 1:1082029/149‑1 (MQ=255) gTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAGTGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATTAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTTCGTTAATCCt > 2:873638/1‑149 (MQ=255) tGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCtt > 2:463837/1‑149 (MQ=255) ttCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGa > 2:823557/1‑149 (MQ=255) ggCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCAGGGTGCAAGTACGTTAATCCTTTGACATggg > 2:465470/1‑149 (MQ=255) ctggaaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCTTCACCGGATGCCCGTGGGCTTTATAAGTGCCACGGATCTCGCCCGGGATCTCGGGGTGGCAGGAGGTTAATCCTTTGACTTggg > 1:70423/5‑149 (MQ=255) ctggaaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATAACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATggg > 2:600796/5‑149 (MQ=255) tggaaCTGCTGCCAGTGGC‑GCAGTTCCAGCGCGGTAATGCCCATTTGTTGCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCTTGTACGTTAATCCTTTGCCAGGGGc > 2:1001870/4‑149 (MQ=255) gCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGc < 1:751955/149‑1 (MQ=255) cAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCATATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGAGCTCCGGGTGCAAGTACGTTAATGCTTTGACATGGGCt > 1:108200/1‑149 (MQ=255) aaaCTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCtt > 1:609423/1‑149 (MQ=255) aaaCTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACAGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCtt > 1:353716/1‑149 (MQ=255) aCTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAATTAGTTGATCATCACCGGATGCCCGCGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCa > 2:1127206/1‑149 (MQ=255) c‑gcCACTGGCAGCAGTTCCAGCGCGGTAAGGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATaaa < 1:1086260/149‑1 (MQ=255) | GCAGTGCTTTGATTGCATCGCGAAACTCATCCAGCGCCGTTTCTGGCGAGCAGGCATACGCCGGATGCAGCGCAAACATCGCCACCGGGTTGTAACCCCAGTAGTTACTTAGCCCCATGCGTTGCAGACGTGGTTCACTGGCAAACTGC‑GCCACTGGCAGCAGTTCCAGCGCGGTAATGCCCAATTGTTTCAAATAGTTGATCATCACCGGATGCCCGAGGGCTTTATAAGTGCCACGGATCTCGACCGGGATCTCCGGGTGCAAGTACGTTAATCCTTTGACATGGGCTTCATAAA > NC_000913/3570566‑3570862 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |