| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,131 | T→G | 5.2% | intergenic (+114/‑84) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,131 | 0 | T | G | 5.2% | 689.6 / 15.1 | 204 | intergenic (+114/‑84) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (146/42); new base G (4/6); total (155/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.45e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 209 total aligned reads displayed.
GCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGC > NC_000913/3780982‑3781280 | tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCgg < 2:4852780/150‑1 (MQ=255) gggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCgg < 2:2967301/149‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCggg < 1:807051/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCggg < 1:421941/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCggg < 1:203431/150‑1 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCAACCGAAACCACTCCCGCA‑GGGGGGGGGGACCCTTCGGCGCGGGATGTTATACCGCACAAGGGAACGACACCCCACGCTTTTTTTATGCCGCGCCCC‑GCCCGGgag > 2:3678477/1‑150 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCACCCCCAAACCCAAGACCGCC‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACAACCACACAAAGAAACGACACCCCACACATTTTTTAACCCACGCCCC‑ACCCGGgag > 2:5000626/1‑150 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGagag < 2:5381310/150‑1 (MQ=255) cagggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAgg < 1:1884528/147‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCGCCCTCTCCCC‑GGAGGGGCGAggg < 1:2185103/150‑1 (MQ=255) tGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCC‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGc < 2:5138428/150‑1 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCg < 1:1165315/150‑1 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCg < 1:3473952/150‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCCAAACCACAACCAAACGGGGGGGGGGCCCGTAC‑GCGCGGTTTGTTCGCCCACACACAGAAACGAAACCCCACAAATTTTTTAGACCACCCCCC‑CCCCGGGGGAGGGGCgggg > 2:2147661/1‑150 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCGAAACCACTCCCGCA‑GGGAGAGGGGGCCCGTGGGCGCTGTGTGTAATCCCGCACGATGAAACGACACCGCCCACTTTTTTTTTACCCCGCCCCGCCCGGGGGGCGGGCGgggg > 2:4901423/1‑150 (MQ=255) gggACTGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGa < 2:1713856/150‑1 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCACACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAg < 1:2775131/150‑1 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAg < 1:3630399/150‑1 (MQ=255) gactGCGGCATAGTCGTTTGCGCCCCCTCCCCCAAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACACTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAgg < 1:1384085/147‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGTGGGGACCGTTCGGCGCTTTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAgg < 1:2994911/150‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAgg < 2:1263278/150‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAgg < 2:4691986/150‑1 (MQ=255) aaTGCGGCATCGTCGTTTGCGCCCCCTCACCCTCCCCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAggg < 2:3069699/150‑1 (MQ=255) gCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑aa < 2:1977163/150‑1 (MQ=255) cGGCATAGTCGTTTGCGCCCCCTCACCCTCACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑aaa < 2:2399066/150‑1 (MQ=255) cTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAAtt > 1:3304708/1‑150 (MQ=255) tCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAAttt > 2:2765964/1‑150 (MQ=255) aCCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTc > 1:3130488/1‑150 (MQ=255) ccTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTg > 1:4322308/1‑150 (MQ=255) ccTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTg > 2:4803615/1‑150 (MQ=255) ccTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTg > 1:1095656/1‑150 (MQ=255) aCCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTAt > 2:1792200/1‑150 (MQ=255) cccTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 1:4784924/1‑150 (MQ=255) ctctCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTTAATCGAAACCGCAGTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑TAAAGGCCGCACTGCTCTCCAATTTTCTGCTATcat > 2:3697461/1‑148 (MQ=255) tctcCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg > 2:4739790/1‑150 (MQ=255) tctcCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg > 2:4668073/1‑150 (MQ=255) ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt > 2:4927727/1‑150 (MQ=255) ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt > 1:3095205/1‑150 (MQ=255) gagaGTGGACCGTTCGGCGCTGTATGTACTCCCTCACACTGAAACGACACCGCACTCTTTTTTTCTACCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCACTTTTCTGCTATCCTGCCCCCGCACTa > 2:1114245/1‑150 (MQ=255) agGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgg > 1:4966646/1‑150 (MQ=255) agGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgg > 1:3760995/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:2652742/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:2595318/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:5489831/1‑150 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt > 2:5411407/1‑150 (MQ=255) tatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATc > 2:877711/1‑150 (MQ=255) tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt > 2:4630745/1‑150 (MQ=255) tgtaCTCCCTCACTCTGAAACGACACCGCACACTTTTTTTCTCCCTCGCCCC‑TCCCGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCCCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt > 2:1733885/1‑150 (MQ=255) acacacTCACTCTGAAACGACACCGCACTCTTTTTTTCTAACTCGCCCC‑ACCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAACGCCGAACTGCTCAACAATTTTCTGCTATACTGCCACCGCACTAAGGCGGCAGTATGCTAAACATCGTACt > 2:3896559/6‑150 (MQ=255) aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCCCGAAGGGGGCAGTATGCTAAACATCGTACt > 2:3059075/1‑150 (MQ=255) aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt > 2:2322718/1‑150 (MQ=255) aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt > 1:4974264/1‑150 (MQ=255) aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt > 2:4058616/1‑150 (MQ=255) aCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACt > 1:4439467/1‑150 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 2:3147834/1‑150 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACttt > 1:2474836/1‑150 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTGTGCTCAACATCGTACTTTAc > 1:4001834/1‑150 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 2:1414433/1‑150 (MQ=255) ccTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 2:2716487/1‑150 (MQ=255) tCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGa > 2:1464396/1‑150 (MQ=255) tCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGa > 2:3558639/1‑150 (MQ=255) aCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc > 1:4146134/1‑150 (MQ=255) tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 1:694867/1‑150 (MQ=255) ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg > 1:4065711/1‑150 (MQ=255) ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg > 2:4341263/1‑150 (MQ=255) ctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg > 1:227973/1‑150 (MQ=255) tGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 2:3019659/1‑150 (MQ=255) gAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaa > 2:4399718/1‑150 (MQ=255) aaaCGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaaa > 2:690532/1‑150 (MQ=255) aaCGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAt > 1:529737/1‑150 (MQ=255) cGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTc > 1:124604/1‑150 (MQ=255) cGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa > 2:3011248/1‑150 (MQ=255) cttttttttttcCTCCCGCGCCCG‑GGGGGTGTGTGGGGGGGGGTGGGGGC‑‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAAt < 2:1837414/145‑1 (MQ=255) cACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAAt > 2:2583579/1‑150 (MQ=255) tctTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt > 2:3728723/1‑150 (MQ=255) tctTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt > 2:1060616/1‑150 (MQ=255) tttttttGTCCCCCCCCCC‑CCGGGGGGGTGGGGGGGGGGGGGGGGCCACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACt < 2:5358390/150‑1 (MQ=255) tttttttCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 2:1618809/1‑150 (MQ=255) tttttttCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 1:3096369/1‑150 (MQ=255) tttttttCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTATCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg > 1:914468/1‑150 (MQ=255) ttttttgCCCCCCCGCCCG‑GGGGGGGTGGGGGGGGGGGGGTGGGC‑‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTgg < 2:4527743/150‑1 (MQ=255) ttttttCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGc > 1:4008886/1‑150 (MQ=255) tttCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTGTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAc > 1:550762/1‑150 (MQ=255) tctcCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcat > 2:3346696/1‑150 (MQ=255) tcCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatca > 1:1352638/1‑150 (MQ=255) tcCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatca > 2:4847771/1‑150 (MQ=255) tcCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatca > 2:907513/1‑150 (MQ=255) cccTCTCCCC‑GGAGGGGCGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAAcatcat > 1:140085/1‑150 (MQ=255) ccTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑ACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACatcatc > 2:2353961/1‑150 (MQ=255) cTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCACCATCATcc > 2:3257697/1‑150 (MQ=255) cTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 2:5213195/1‑150 (MQ=255) cTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATcc > 1:5188989/1‑150 (MQ=255) tCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 1:4609513/1‑150 (MQ=255) tCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 1:211503/1‑150 (MQ=255) tCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 1:1651069/1‑150 (MQ=255) tCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCg > 1:659220/1‑150 (MQ=255) c‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 1:4373836/1‑150 (MQ=255) c‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTg > 1:2935772/1‑150 (MQ=255) tCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgc > 1:3006570/1‑150 (MQ=255) tCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTgc > 2:3932131/1‑150 (MQ=255) | GCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCA‑GGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCC‑TCCGGGGAGAGGGCCGGGGTGAGGGG‑‑AAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAATACTGGCAACATCATCCGTCTTTGC > NC_000913/3780982‑3781280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |