Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,470,427 C→A 11.9% Q433K (CAA→AAA)  gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,470,4270CA11.9% 1125.3 / 49.6 405Q433K (CAA→AAA) gtrSserotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
Reads supporting (aligned to +/- strand):  ref base C (124/219);  new base A (55/5);  total (181/224)
Fisher's exact test for biased strand distribution p-value = 1.21e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 418 total aligned reads displayed.

TTGTAGTATCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCC  >  NC_000913/2470278‑2470576
                                                                                                                                                      |                                                                                                                                                     
 tGTAGTATCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCa                                                                                                                                                      <  2:10180711/150‑1 (MQ=255)
  gtagtaTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTaaa                                                                                                                                                     >  1:2072198/1‑150 (MQ=255)
   tagtaTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATGCATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCaaa                                                                                                                                                    <  2:7372420/150‑1 (MQ=255)
   tagtaTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCaaa                                                                                                                                                    <  2:1992498/150‑1 (MQ=255)
   tagtaTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAAATaaaa                                                                                                                                                    >  2:9657221/1‑150 (MQ=255)
   tagtaTCTCGTGTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCaaa                                                                                                                                                    <  2:8900810/150‑1 (MQ=255)
     gtaTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGa                                                                                                                                                  <  1:7254154/150‑1 (MQ=255)
     gtaTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAAATCaaata                                                                                                                                                  >  1:8376043/1‑148 (MQ=255)
     gtaTCTCTTTGTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATGTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATACCAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGa                                                                                                                                                  <  1:6206826/150‑1 (MQ=255)
       aTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGaaa                                                                                                                                                <  1:2162188/150‑1 (MQ=255)
       aTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGaaa                                                                                                                                                <  1:2298928/150‑1 (MQ=255)
       aTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGaaa                                                                                                                                                <  2:5641974/150‑1 (MQ=255)
        tctcTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTTATTTTTAAAATAATTAAAAGaaaa                                                                                                                                               >  1:8075817/1‑149 (MQ=255)
          tctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTTATTTATTAAATAATTAAAATaaaaaa                                                                                                                                             >  1:3773630/1‑147 (MQ=255)
            tttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTTATTTATAAAAAAATTaaaaaaaaaaaag                                                                                                                                           >  1:3952068/1‑145 (MQ=255)
             ttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTAAAATAAATCAAGa                                                                                                                                          >  2:4205498/1‑150 (MQ=255)
             ttgtGGAAGATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGa                                                                                                                                          <  2:7886394/147‑1 (MQ=255)
                tGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑GTTTTTAATTTATTAAATAATTCAAAGAAATAAAGACaa                                                                                                                                       >  1:163606/1‑150 (MQ=255)
                 ggAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTAAAATAAAAAAAGaaaaa                                                                                                                                      >  2:4748087/1‑149 (MQ=255)
                  gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATa                                                                                                                                     <  2:2736447/150‑1 (MQ=255)
                  gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATa                                                                                                                                     <  1:1372656/150‑1 (MQ=255)
                  gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAAATTAATAAATAATTAAAATAAATCAAGaaaaaa                                                                                                                                     >  2:3618387/1‑148 (MQ=255)
                       tctcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGAt                                                                                                                                <  1:4483021/150‑1 (MQ=255)
                        ctcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAAATAAAATAAATAAAAAAAAAATCGAtt                                                                                                                               >  2:6991130/1‑149 (MQ=255)
                         tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAAACAAGACAAAAGCGATGt                                                                                                                              >  2:7704122/1‑150 (MQ=255)
                         tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAAACAAATCAAAAGCGATGt                                                                                                                              >  1:8937689/1‑150 (MQ=255)
                          cAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAATCGATGTa                                                                                                                             >  2:1321106/1‑150 (MQ=255)
                           aaTTTTATGTGTCATTTTTAGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGTAATTTATTTTTCTATCGACCTTTGCTTATACATAACAGTCGT‑TATTTTAATTTATAAAATAATTCAAAGAAATCAATACAATATCGAAGTaa                                                                                                                            >  2:7538249/1‑150 (MQ=255)
                             ttttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAg                                                                                                                          <  1:640261/150‑1 (MQ=255)
                             ttttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAg                                                                                                                          <  2:2462803/150‑1 (MQ=255)
                              tttATGTGTCATTTTTCGGGGAAGGATATATAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCTACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGc                                                                                                                         <  1:10141742/150‑1 (MQ=255)
                               ttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCa                                                                                                                        <  1:2769409/150‑1 (MQ=255)
                                 aTGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACt                                                                                                                      <  2:2831404/150‑1 (MQ=255)
                                 aTGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACt                                                                                                                      <  1:3501995/150‑1 (MQ=255)
                                   gtgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAATCATTTATTTGGAATGTATTTTTCTTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTaa                                                                                                                    <  2:4816742/150‑1 (MQ=255)
                                      tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAATACAATATCGATGTAAAGAACTAAttt                                                                                                                 >  2:7060643/1‑150 (MQ=255)
                                          ttttCGGGGACGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTaaa                                                                                                             >  2:9383974/1‑150 (MQ=255)
                                          ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATTTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGAAGTAAAGCACTAAGTTTaaa                                                                                                             <  2:3348569/150‑1 (MQ=255)
                                          ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTaaa                                                                                                             <  2:3577347/150‑1 (MQ=255)
                                               ggggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAAATTATAAAAAAATTAAAAGAAAACAAGACAAAAGCGATGTAAATCACAAAGGTTAAATTgcg                                                                                                        >  2:4166713/1‑150 (MQ=255)
                                                     ggATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATAAAGAAAATAGCGATTTAAAGCAAGAATTTTAAATTTCGCGccca                                                                                                  >  2:10080503/1‑148 (MQ=255)
                                                           agagATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATgg                                                                                            <  1:9933944/150‑1 (MQ=255)
                                                           agagATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAATCGATGTAAATCACTAAGTTTAAATTGCGCGCCAATCaatg                                                                                            >  2:8239034/1‑147 (MQ=255)
                                                            gagaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAATAAATCAAGAAAAAAGCGATGTAAATCACTAAGTTTTATTTTCGCGCCACTCATTgc                                                                                           >  1:5807017/1‑150 (MQ=255)
                                                            gagaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgc                                                                                           <  2:4933341/150‑1 (MQ=255)
                                                              gaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgcgc                                                                                         <  1:10038657/150‑1 (MQ=255)
                                                              gaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgcgc                                                                                         <  1:3648457/150‑1 (MQ=255)
                                                                   aagcaagcATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTTAATTT‑TAAAAAAAATTAAAGAAAAAAAGAAAAAAGACATGTTAATCAAGAAAATTAAAAATCGCGCCCAAAGAGGCGCGcaca                                                                                    >  1:8619492/1‑150 (MQ=255)
                                                                      caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAAATAAAAGAAATAAATAAAAAATCGATTTAAATCAAAAATTTTAAATTGATCGCCAATAATTGCGCGCACAAGc                                                                                 >  2:8357408/1‑150 (MQ=255)
                                                                       aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAAATCAAATAAAAAAAGAAAATAGCGATTTTAATAACGAAGTTTATAATGAGAGCCACTCAAGGCGCGCAAAAGCt                                                                                >  1:5854657/1‑150 (MQ=255)
                                                                       aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAAATTATAAAAAAATTCAAATAAATAAACACAAAAGCGATGTAAATCACTAAGTTTAAATTTAGCGCCAATCAAGGCGCGCACAAGca                                                                                >  2:3125394/1‑149 (MQ=255)
                                                                        agcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑GTTTTTTATTTTTAAAAAAATTAAAAAAAATAAAGAAAAAATCGATTTTAAGCAATGAGTTTTAATTTAGCGCCACACAATGCGCGCCCCAGcga                                                                               >  1:6574345/1‑148 (MQ=255)
                                                                           atttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAAGCGAGGTAAAGCACTAAGTTTAAATTGCGCGCCAAACAAGGCGCGCCCAAGCTataa                                                                            >  2:300139/1‑150 (MQ=255)
                                                                                tttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑GTTTTTTATTTATTAAAAAATTAAAAAAAAAAAAAAAAAAAGCGATGTTAAACACAAAATTTAAATTTAGCGCCAAAAAGGGCGCGCCCAAGCTataaaaaca                                                                       >  1:4146299/1‑145 (MQ=255)
                                                                                   ggAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAAAAATTCAAATAAATCAAGACAATAGCGATGTAAAGCACAAAGTTTAAATTGCGCGCCAATCAAGGCGCGCACAAGCTATAATACCAAcc                                                                    >  2:1460757/1‑150 (MQ=255)
                                                                                       tGTAATTTACGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAAt                                                                <  1:5619082/150‑1 (MQ=255)
                                                                                         tATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAAATTAAAAAATAAATCAAAGAAATAAAGAAAAAAGCGATGTAAATCACGAATTTTAAATTTCGCGCCCAAAATGGCGCGCACCAGCTATAATAACCACCGAAttt                                                              >  2:9566555/1‑150 (MQ=255)
                                                                                          aTTTTTCGTTCGACCTTTGCTTATACATAACAGTCTT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtc                                                             <  1:6025681/150‑1 (MQ=255)
                                                                                           tttttCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAAAAATTCAAAGAAATCAAGACAATATCGATGTAAAGCACTAAGGTTAAATTGCGCGCCAAACATGGCGCGCACAAGCTATTAAACCCACCTAATTtct                                                            >  2:8431470/1‑150 (MQ=255)
                                                                                            ttttCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtctc                                                           <  2:6798346/150‑1 (MQ=255)
                                                                                            ttttCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtctc                                                           >  2:5912498/1‑150 (MQ=255)
                                                                                             tttCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                          <  2:5758063/150‑1 (MQ=255)
                                                                                               tctttcgACCTTTTTTTATACTTAAATTTCGT‑TTTTTTAATTTTTAAATTAATTAAAATAAATAAACACATTAGCGATTTAAAGAAATATTTTTAAATTGCGCGCAAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctc                                                        <  1:4693152/147‑1 (MQ=255)
                                                                                               tcgttcgACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctc                                                        <  2:876166/150‑1 (MQ=255)
                                                                                                     gACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCTATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTa                                                  <  1:7432387/150‑1 (MQ=255)
                                                                                                     gACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCAATAATAACAACCTAAATTATCCTCCTCTTa                                                  >  2:5142221/1‑150 (MQ=255)
                                                                                                     gACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTAAAAGAAATCAAGACAAAAGCGATGTAAAGCACTAAGTTTAAATTTCGCGCCCAACAAGGCGCGCCCAAGCGATAATACCAAACAAATTTATCCTCCTCTTa                                                  >  2:4629313/1‑150 (MQ=255)
                                                                                                       ccTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTaga                                                <  2:2308539/150‑1 (MQ=255)
                                                                                                        cTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAAGCGATGTAAAGCACTAAGTTTAAATTTCGCGCCAATCATGGCGCGCACAAGCTATAATAACAACCAAAATTATCCTCCACTTatag                                               >  2:1417698/1‑150 (MQ=255)
                                                                                                         tttGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAAAAAATAAAAGAAATCAAGACAAAATCGATGTAAATCACAAAGTTTAAAATTGGAGCCAATCATGGCGCGCACAAGCTATAATACCAACCAAATTTGAACACCTCTTAGAGt                                              >  2:2198037/1‑150 (MQ=255)
                                                                                                         tttGCTTATACAAAACAGTCTT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGt                                              <  1:7798318/150‑1 (MQ=255)
                                                                                                           tGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAATAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGa                                            <  1:1139993/150‑1 (MQ=255)
                                                                                                           tGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGa                                            <  1:7193427/150‑1 (MQ=255)
                                                                                                            tcTTATACATAACAGTCTT‑TTTTTTAATTTATAAAATAATTCAAATAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                           <  1:3110591/149‑1 (MQ=255)
                                                                                                                   cATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATAtct                                    <  1:4317173/150‑1 (MQ=255)
                                                                                                                   cATAACAGTCGT‑TTTTTTAATTTATAAAAAAAATCAAAGAAATAAAGACAAAAGCGATGTAAAGAACTAAGTTTAAAATGCGCGCCAATCAAGGCGCGCACAAACTATAATAACAACCTAATTTATACAACTCATAGAGTGACaataaaa                                    >  2:8213081/1‑147 (MQ=255)
                                                                                                                     tAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                  <  2:606346/150‑1 (MQ=255)
                                                                                                                     tAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                  <  1:4916999/150‑1 (MQ=255)
                                                                                                                      aaCAGTCGT‑TTTTTTAATTTATAAAATAATTAAAAGAAATCAAGACAAAATCGATGTAAATCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCAAAATTCTACACCTCTTATAGTGACTATATCGCCt                                 >  2:8599103/1‑150 (MQ=255)
                                                                                                                          gTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                             <  1:4809786/150‑1 (MQ=255)
                                                                                                                          gTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATa                             <  2:1802584/150‑1 (MQ=255)
                                                                                                                           tCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAg                            <  2:6582668/150‑1 (MQ=255)
                                                                                                                             gT‑TTTTTTAATTTATAAAATATTTCAAAGAAATCAAGACTATAGCGATGTAAAGCACTAAGTTTAAATAGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTATAGTGACTATTTCTCCTGATAGaa                          <  2:6202345/150‑1 (MQ=255)
                                                                                                                             gT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGaa                          >  2:4317166/1‑150 (MQ=255)
                                                                                                                                 tttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTg                       <  1:2468370/150‑1 (MQ=255)
                                                                                                                                  ttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGc                      <  1:989283/150‑1 (MQ=255)
                                                                                                                                   tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                     <  2:8528135/150‑1 (MQ=255)
                                                                                                                                   tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                     <  1:5151917/150‑1 (MQ=255)
                                                                                                                                    ttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCgg                    >  2:9191994/1‑150 (MQ=255)
                                                                                                                                        tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTATAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                <  2:3834500/150‑1 (MQ=255)
                                                                                                                                        tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                <  1:8231132/150‑1 (MQ=255)
                                                                                                                                        tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                <  2:1237717/150‑1 (MQ=255)
                                                                                                                                         ttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTg               >  1:9451789/1‑150 (MQ=255)
                                                                                                                                          tataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGa              >  2:1074661/1‑150 (MQ=255)
                                                                                                                                          tataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGa              <  1:10125207/150‑1 (MQ=255)
                                                                                                                                           ataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGAc             >  2:8143879/1‑150 (MQ=255)
                                                                                                                                             aaaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTa           <  1:1914295/150‑1 (MQ=255)
                                                                                                                                              aaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATCGAAGTGCGGTATTGACTAt          >  2:7150993/1‑150 (MQ=255)
                                                                                                                                              aaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTAt          >  1:7631260/1‑150 (MQ=255)
                                                                                                                                                      cAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc  <  1:2951097/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
TTGTAGTATCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCC  >  NC_000913/2470278‑2470576

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑