Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,239,609 T→G 7.3% intergenic (+64/‑335) alx → / → sstT putative membrane‑bound redox modulator/sodium:serine/threonine symporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,239,6090TG 7.3% 920.8 / 30.0 338intergenic (+64/‑335)alx/sstTputative membrane‑bound redox modulator/sodium:serine/threonine symporter
Reads supporting (aligned to +/- strand):  ref base T (201/88);  new base G (3/20);  total (206/132)
Fisher's exact test for biased strand distribution p-value = 1.11e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 350 total aligned reads displayed.

TGGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATT  >  NC_000913/3239460‑3239758
                                                                                                                                                      |                                                                                                                                                      
   gCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCa                                                                                                                                                     <  2:7559166/150‑1 (MQ=255)
   gCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCa                                                                                                                                                     <  1:6371241/150‑1 (MQ=255)
     gtggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCTGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAAGATTTGCACCGTTTT‑CTCCCTCTCCCTTCCAgg                                                                                                                                                   >  2:6334560/1‑150 (MQ=255)
     gtggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAgg                                                                                                                                                   >  1:4639968/1‑150 (MQ=255)
       ggtgTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGg‑a                                                                                                                                                <  2:1149431/150‑1 (MQ=255)
          gtTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑agag                                                                                                                                             <  2:6171923/150‑1 (MQ=255)
           tttGGCTTTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAgg                                                                                                                                            <  1:5219976/150‑1 (MQ=255)
           tttGGCATTCTGGTGATGACTTTTATTATCAACGCCTGGGTGATTTATCGGCATGATAAGCAGCGGTGTGTATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTGGATGGG‑AGAgg                                                                                                                                            <  1:2075809/150‑1 (MQ=255)
           tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAgg                                                                                                                                            >  1:5927046/1‑150 (MQ=255)
           tttGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAgg                                                                                                                                            >  2:3389851/1‑150 (MQ=255)
             tGGCATTCTGGTGATGACGTTTATTATCATCGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTGGAAGGG‑AGAggga                                                                                                                                          <  1:8413530/150‑2 (MQ=255)
             tGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CACCCTCTCCCTGGAAGGG‑AGAggga                                                                                                                                          <  1:2973960/150‑2 (MQ=255)
             tGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CACCCTCTCCCTGGAAGGG‑AGAggga                                                                                                                                          <  1:3497883/150‑2 (MQ=255)
             tGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CACCCTCTCCCTGGAAGGG‑AGAggga                                                                                                                                          <  1:3250041/150‑2 (MQ=255)
              ggCATTCTGGTTATGAAGTTTATTATCAACGCCTGGGTGATTTATCGGCATTATAAGCAGCGGGGTGTATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAgggag                                                                                                                                         <  1:6183165/150‑3 (MQ=255)
                 aTTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCggg                                                                                                                                      <  2:1896686/150‑1 (MQ=255)
                 aTTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCggg                                                                                                                                      >  2:7498457/1‑150 (MQ=255)
                     tGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGa                                                                                                                                  <  2:6076494/150‑1 (MQ=255)
                       gTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAgg                                                                                                                                <  2:7004649/150‑1 (MQ=255)
                       gTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACAGGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAgg                                                                                                                                >  1:5349851/1‑150 (MQ=255)
                          atgaCGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAATCCGTGTACCCTGTCATTAACAAGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAgggga                                                                                                                             >  1:2660458/1‑148 (MQ=255)
                               gTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAAtttt                                                                                                                        >  1:7927824/1‑150 (MQ=255)
                                tttATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAAttttt                                                                                                                       >  2:2681162/1‑150 (MQ=255)
                                tttATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAAttttt                                                                                                                       >  2:5266653/1‑150 (MQ=255)
                                 ttattaTCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTc                                                                                                                      >  1:7662523/1‑150 (MQ=255)
                                  tattatCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCg                                                                                                                     >  2:7935858/1‑150 (MQ=255)
                                          aCGCCTGGGTGATTTAGCGGCATGATAAGCAGGGGGTTGTATATTTTTTAATGGGCATAAGCCGTGTACCCTGACATTAAAAGGAGCACCGTTTT‑CTCCCTCTCCCTACCCGGG‑TGCGGGTCGGGGTGTGGGTAATTTTTCGCACCGATg                                                                                                             <  2:895882/150‑1 (MQ=255)
                                             ccTGGTTTAATTATCGGCATGATAAGCAGGGGGGTTGATTATTTTTAATCTGCCTAAGCCGTTTACCCTGAAATTAAAATTAGCACCGTTTC‑CTCCCTCCCCCTTCCAGGG‑AGAGGGTCGGGGTGTGGGTATTTTTTCGCACCGATGCTg                                                                                                          <  2:159576/150‑1 (MQ=255)
                                              cTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTgg                                                                                                         >  2:1438264/1‑150 (MQ=255)
                                               tGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGc                                                                                                        >  1:6947850/1‑150 (MQ=255)
                                                  gTGATTTATCGGCATGATAAGCAGCGGGGTGTATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCCCCGTTTT‑CTCCCTCTCCCTTCCCGGG‑AGAGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTg                                                                                                     <  2:8333289/150‑1 (MQ=255)
                                                  gTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTg                                                                                                     <  2:8626992/150‑1 (MQ=255)
                                                     aaTTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTc                                                                                                  >  1:6418996/1‑150 (MQ=255)
                                                        tATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAAATATTCGCACCGAGGCTGGCCTGTTcccc                                                                                               >  1:6471809/1‑150 (MQ=255)
                                                          tgggCATGATACGCTGGGGGGTGTTTATTTTTTAATCTGCCTACGCGGTGTACCCTGTAATTAACATGCGCACGGTTTC‑CCCCCTCCCCCTCCCGGGG‑TGTGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTc                                                                                             <  2:2402807/148‑1 (MQ=255)
                                                             gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                                                                                          >  1:2191421/1‑150 (MQ=255)
                                                             gCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAcc                                                                                          >  1:4402356/1‑150 (MQ=255)
                                                              cATGATACGCAGCGGGGTGGATAATTTTTACTCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCGCCCTGCCCGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCAccc                                                                                         <  2:6469966/150‑1 (MQ=255)
                                                              cATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTACCCTCAccc                                                                                         >  1:8512374/1‑150 (MQ=255)
                                                                      gcagcGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCctc                                                                                 >  1:5791223/1‑150 (MQ=255)
                                                                          cGGGTTGGATAATTTTTCACCGCCCTACGCGGGCTACCCGGTCATTAACATGCGCCCCGTTTG‑CCCCCCCCCCCGGCCCGGC‑TGCGGGAGGGGGGGCGGGTCATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTccc                                                                             <  2:482860/150‑1 (MQ=255)
                                                                            gggTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACAGGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCa                                                                           >  1:2901938/1‑150 (MQ=255)
                                                                              gTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCaaa                                                                         >  1:1424938/1‑150 (MQ=255)
                                                                                ggATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACg                                                                       >  2:2527423/1‑150 (MQ=255)
                                                                                 gATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACgg                                                                      >  1:2514150/1‑150 (MQ=255)
                                                                                  tttttttttATTGTGCATAGGCGTTGTACCATTTAATAAAAATGAGCCGTTTTTT‑CCCCCGCACCGTCCGTGGG‑TGTGGGTGGGGGTGTGGCAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg                                                                     <  1:1188374/146‑1 (MQ=12)
                                                                                  aTAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACggg                                                                     >  1:4524354/1‑150 (MQ=255)
                                                                                       ttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAg                                                                >  2:7085363/1‑150 (MQ=255)
                                                                                       ttttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAg                                                                >  2:2885429/1‑150 (MQ=255)
                                                                                        tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAgg                                                               >  2:5930683/1‑150 (MQ=255)
                                                                                        tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCACACCCTAAACCTCTCCCCAAACGGGGCGAgg                                                               >  1:8356655/1‑150 (MQ=255)
                                                                                        tttAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTGTTCGCACCGATGCTGGCCTGTGCCCCTCACCCGAACCCTCTCCCCACCcggggcgggg                                                               >  2:6252990/1‑150 (MQ=255)
                                                                                           acccTGCCAACGCCGTGTACCCTGTCTTTAACATGCGCACCGTTTT‑CTCCCTCTCCCTGCCTGGG‑AGTGGGGCGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGa                                                            <  2:8464081/147‑1 (MQ=25)
                                                                                           aaTCTGCCAAAGCCGTGTACCCTGTCATTAACTTGAGCACCGTTTT‑CTCCCTCTCCCTTCCCGGG‑AGCGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGa                                                            <  2:4955069/150‑1 (MQ=255)
                                                                                           aaTCTCCATAGGCCGTTTACCCTTTATTTAACTGGAGCACCTTTTC‑CGCCACCCCCCGCCCGGGG‑AGTGGTGGGGGTTGCGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGa                                                            <  2:4060562/150‑1 (MQ=12)
                                                                                               tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTATTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                        >  2:4244132/1‑150 (MQ=255)
                                                                                               tGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGATCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGa                                                        >  2:3062799/1‑150 (MQ=255)
                                                                                                 ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                      >  2:1941598/1‑150 (MQ=255)
                                                                                                 ccTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGCTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGGTCCCCTCACCCTAACCCTCTCCCCAACCGGCGCGAGCGGAcggccc                                                      >  2:5121270/1‑145 (MQ=37)
                                                                                                 ccTAAGCCGTGAACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGAcc                                                      >  2:5049467/1‑150 (MQ=255)
                                                                                                   tAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGa                                                    >  1:6065522/1‑150 (MQ=255)
                                                                                                          tgtACCCTGTCATTAACTTGAGCACCTTTTT‑CTCCCTCCCCCTTCCTGGT‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCttt                                             <  1:6348975/150‑1 (MQ=25)
                                                                                                          tgtACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCttt                                             >  1:3638974/1‑150 (MQ=255)
                                                                                                           gtACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCCGGG‑AGTGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtttt                                            <  1:2022297/150‑1 (MQ=255)
                                                                                                           gtACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtgtt                                            >  2:3254868/1‑150 (MQ=255)
                                                                                                           gaaCCCTTTAATTAACTTGAGCCCCGTTTC‑CTCCCTCACCCTCCCTGGG‑TGTGGGTGGGGTTGCGGTCCATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtttt                                            <  2:2781912/148‑1 (MQ=21)
                                                                                                             ccccTGTATTTAACAGGCG‑ACCGTTTTCCCCCCGCTCCCGTCCGGGG‑TGGGGGTGGGGGTGTGGGTCATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtttttt                                          <  2:801319/149‑1 (MQ=18)
                                                                                                             aCCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCtttttt                                          <  1:7993990/150‑1 (MQ=255)
                                                                                                              cccTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTttgttg                                         >  2:3587045/1‑150 (MQ=255)
                                                                                                               ccTGACATAAACTTCCGCCCCTTTTA‑CTCCCTCCCCCTCCCCGGG‑TGCGGGTGGGGGTGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGa                                        <  1:1001639/150‑1 (MQ=21)
                                                                                                                ctgaacttAACATGCGCCCGGTTTT‑CGCCCTCTCCCTTCCGGTG‑TGTGGGTCGGGGTGTGGGCAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                       <  1:2767579/144‑1 (MQ=21)
                                                                                                                cgttatttAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCCGGG‑AGTGGGTCGGGTTGAGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                       <  2:5392987/144‑1 (MQ=25)
                                                                                                                cTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCGGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAt                                       >  1:8647401/1‑150 (MQ=255)
                                                                                                                 tGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtg                                      >  1:6108827/1‑150 (MQ=255)
                                                                                                                 tGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtg                                      >  2:2947674/1‑150 (MQ=255)
                                                                                                                 tGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCATCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCGGTTCCCCTCACCCTAACCCTCTCCCCAAAAGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtg                                      >  1:4330927/1‑150 (MQ=255)
                                                                                                                  gTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgt                                     >  2:4379041/1‑150 (MQ=255)
                                                                                                                   taaTTAAATTGAGCACGGTTTC‑CTCCCTCGCCCTGCCTGGG‑TGGGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgtt                                    <  2:7745219/148‑1 (MQ=21)
                                                                                                                    cATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGTGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgttg                                   <  2:1289842/150‑1 (MQ=255)
                                                                                                                     aTTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTGCCCTCACCCTAAACCTCTACCCAAAAGGGGCGAGGGGTCTGAACGAGTCCTTTTTTTTtgtttt                                  >  1:3863111/1‑148 (MQ=255)
                                                                                                                     aTTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGAtgttgt                                  >  2:4518886/1‑150 (MQ=255)
                                                                                                                        aaCATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGtcat                               <  2:5774939/150‑1 (MQ=255)
                                                                                                                            tGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCACTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGTTGTTGTCATCAGt                           >  1:1637997/1‑150 (MQ=255)
                                                                                                                              aGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCt                         <  2:8673090/150‑1 (MQ=255)
                                                                                                                               gCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTg                        <  2:2194762/150‑1 (MQ=255)
                                                                                                                               cgcccGTTTT‑CCCCCCCCCCCCTCCGGGGTCGTGGGTGGGGGTGTGGGCAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCt                         <  2:3839034/147‑1 (MQ=25)
                                                                                                                                cACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTgg                       >  1:5660656/1‑150 (MQ=255)
                                                                                                                                 aCCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGa                      >  2:8583388/1‑150 (MQ=255)
                                                                                                                                    gTTTT‑CGCCCTCTCCCTTCCTGGG‑TGTGGGTGGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGc                   <  1:5514685/150‑1 (MQ=37)
                                                                                                                                             cctctccctTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAAACCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTTATGTTGTCATCAGTCTGGAATCCGCACGtt           >  2:7345665/1‑150 (MQ=255)
                                                                                                                                             cctctccctTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCACACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt           >  1:4950080/1‑150 (MQ=255)
                                                                                                                                             cctcgccctTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt           <  1:7263626/150‑1 (MQ=255)
                                                                                                                                             cctcccccgTCCCGGG‑TGTGGGTGGGGGGGTGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGtt           <  1:5574868/150‑1 (MQ=37)
                                                                                                                                              ctctccctGGAAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATTTTTTCATCAGTCTGGAAGCCGCACGTTg          >  1:2335432/1‑150 (MQ=37)
                                                                                                                                               tctccctTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCAGGAAGCCGCACGATgg         >  1:8105399/1‑150 (MQ=255)
                                                                                                                                               ccaccctTCCTGGG‑TGTGGGTGGGGGTGCGGTTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAACCGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTgg         <  1:7525059/147‑1 (MQ=37)
                                                                                                                                                 tccctTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCt       >  1:2818673/1‑150 (MQ=255)
                                                                                                                                                   cctTCGTGGG‑AGTGGGTGGGGGTGTGGGAAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCttt     <  1:7041401/150‑1 (MQ=37)
                                                                                                                                                     gtCCCGGG‑AGTGGGTCGGGGTTCGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTAt   <  2:558421/149‑1 (MQ=255)
                                                                                                                                                      tCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGAGGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTGGTCATCAGTCTGGTAGCCGCACGTTGTCTGTAtt  >  1:5426728/1‑150 (MQ=37)
                                                                                                                                                      |                                                                                                                                                      
TGGGCGTGGTGTTTGGCATTCTGGTGATGACGTTTATTATCAACGCCTGGGTGAATTATCGGCATGATAAGCAGCGGGGTGGATAATTTTTAATCTGCCTAAGCCGTGTACCCTGTCATTAACATGAGCACCGTTTT‑CTCCCTCTCCCTTCCAGGG‑AGAGGGTCGGGGTGAGGGTAATTTTTCGCACCGATGCTGGCCTGTTCCCCTCACCCTAACCCTCTCCCCAAACGGGGCGAGGGGACTGACCGAGTCCTTTTTTGATGTTGTCATCAGTCTGGAAGCCGCACGTTGGCTTTATT  >  NC_000913/3239460‑3239758

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑