Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 843,216 G→T 9.8% M295I (ATG→ATT)  rlmF → 23S rRNA m(6)A1618 methyltransferase, SAM‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913843,2160GT 9.8% 1329.9 / 26.2 438M295I (ATG→ATT) rlmF23S rRNA m(6)A1618 methyltransferase, SAM‑dependent
Reads supporting (aligned to +/- strand):  ref base G (152/228);  new base T (56/2);  total (208/230)
Fisher's exact test for biased strand distribution p-value = 6.48e-18
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 447 total aligned reads displayed.

CAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACGCCCGCCAGGTCGAAATGTTT  >  NC_000913/843067‑843365
                                                                                                                                                       |                                                                                                                                                     
cAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATg                                                                                                                                                       <  1:3340386/150‑1 (MQ=255)
  ggTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGaa                                                                                                                                                     <  1:6475211/150‑1 (MQ=255)
  ggTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCC‑GGGACCTTTATGaa                                                                                                                                                     >  2:6969031/1‑150 (MQ=255)
   gagATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGATGGACGTGGGCGCGGTGAAGGTTGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAac                                                                                                                                                    <  1:1820313/148‑1 (MQ=255)
   gTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCC‑TGGCCCTTTATGAac                                                                                                                                                    >  1:3700579/1‑150 (MQ=255)
   gTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTTGC‑TGGACCGTTATGTac                                                                                                                                                    >  2:82919/1‑150 (MQ=255)
      aTGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAacgac                                                                                                                                                 <  2:2024070/150‑1 (MQ=255)
        gtgGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCC‑TGGACCATTATGAacgacgc                                                                                                                                               >  2:3579359/1‑149 (MQ=255)
         tgGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTTTTGGC‑GGGACCTTTATTAAACACGag                                                                                                                                              >  2:344408/1‑150 (MQ=255)
         tgGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCC‑GGGACCGTTATGAACGACGag                                                                                                                                              >  2:415645/1‑150 (MQ=255)
           gTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTGCCCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGagc                                                                                                                                             >  2:761747/1‑150 (MQ=255)
           gTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGagca                                                                                                                                            <  2:859174/150‑1 (MQ=255)
           gTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTTGC‑TGGACCTTTATGAAAGACGagca                                                                                                                                            >  2:7925846/1‑150 (MQ=255)
                aaTCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGcgcc                                                                                                                                       <  1:7391376/149‑1 (MQ=255)
                 aTCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGcgccg                                                                                                                                      <  2:7166611/150‑1 (MQ=255)
                 aTCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGcgccg                                                                                                                                      <  2:610218/150‑1 (MQ=255)
                    aCTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGccgccg                                                                                                                                   >  2:5347208/1‑150 (MQ=255)
                       ggTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGttt                                                                                                                                <  1:8220954/150‑1 (MQ=255)
                       ggTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTTGC‑AGGACCGTTATTTAACACGAGCACCgccccccatt                                                                                                                                >  1:8540025/1‑146 (MQ=255)
                          aTCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGt                                                                                                                             <  1:4223597/150‑1 (MQ=255)
                          aTCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGGGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGt                                                                                                                             <  1:4169150/150‑1 (MQ=255)
                             tcGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCaa                                                                                                                          >  2:6842740/1‑150 (MQ=255)
                             tcGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTGCC‑TGGGCCGTTATTAACGACCAGCAGCGCCCCCGGTTTGTCaa                                                                                                                          >  1:7232954/1‑150 (MQ=255)
                              cGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAAt                                                                                                                         <  1:3121740/150‑1 (MQ=255)
                               gtggtgAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGGGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATc                                                                                                                        <  1:8361041/150‑1 (MQ=255)
                                   tgAAAACTAACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATTAACGACGACCAGCGCCGCCGGTTTGTCAATAGccc                                                                                                                    >  1:5052127/1‑149 (MQ=255)
                                     aaaaCTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGc                                                                                                                  <  2:7747904/150‑1 (MQ=255)
                                     aaaaCTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGc                                                                                                                  <  1:747715/150‑1 (MQ=255)
                                     aaaaCTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTTGC‑TGGACCATTATTAAAGACGAGCCGCGCCGCCCTTTTGTGAAAAGCCAGc                                                                                                                  >  2:170464/1‑150 (MQ=255)
                                        aCTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTTCC‑GGGGCCGTTTTGTACGACGAGCAGCGCCGCCGGGTTGGGAATAGCCcgcggg                                                                                                               >  1:4931546/1‑148 (MQ=255)
                                         cTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCC‑AGGACCATTATTAACCACGAGCCGCGCCCCCGATTTGTCAAAAGCCAGCGTTa                                                                                                              >  1:6018748/1‑150 (MQ=255)
                                          ttACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTaa                                                                                                             >  2:8436728/1‑150 (MQ=255)
                                             ccgccgTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGc                                                                                                          <  2:674671/150‑1 (MQ=255)
                                              cgccgTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑AGGGCCGTTATGAACGACGAGCCGCGCCGCCCTTTTGTCAAACGCCCGCCGTAAAGCg                                                                                                         >  1:2901542/1‑150 (MQ=255)
                                               gccgTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGt                                                                                                        <  1:445021/150‑1 (MQ=255)
                                               gccgTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCC‑GGGACCTTTATGAACGACGAGCAGCGCCCCCCGTTTGTCAATCGCCAGCGGTAAATCGt                                                                                                        >  2:2241092/1‑150 (MQ=255)
                                                ccgTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGtt                                                                                                       <  1:8674456/150‑1 (MQ=255)
                                                ccgTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGtt                                                                                                       <  2:4106802/150‑1 (MQ=255)
                                                ccgTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGtt                                                                                                       <  2:9129997/150‑1 (MQ=255)
                                                   ttGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTGC‑AGGACCTTTATTAAAGACGAGCAGCGCCCCCCGTTTTTCAAAAGCCACCCGTAAAACggtggt                                                                                                    >  1:2331796/1‑150 (MQ=255)
                                                   ttGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGt                                                                                                    <  2:4736876/150‑1 (MQ=255)
                                                      tATCGTG‑CCCTGCCGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTcc                                                                                                 <  2:1230879/150‑1 (MQ=255)
                                                      tATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTcc                                                                                                 <  2:5688267/150‑1 (MQ=255)
                                                       aTCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTccc                                                                                                <  2:3454695/150‑1 (MQ=255)
                                                        tCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGGTATTTCC‑GGGACCATTATGAACCACCAGCCGCGCCCCCCTTTTGTCAAAACCCCCCCGTAAAGCGGTGGTTcccc                                                                                               >  1:9076562/1‑150 (MQ=255)
                                                        tCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGGTATTGCCGTGGA‑CTTTATGAACGACGAGCCCCGCCGCCCGTTTGTAAATCGCCAGCGGTAAATCGTTGGGTaccc                                                                                               >  1:5548604/1‑150 (MQ=255)
                                                           tG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCcgg                                                                                            <  1:1559851/150‑1 (MQ=255)
                                                               ccTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTTCC‑AGGGCCATAATGTACCAACAGCACCCCCGCCCTGTTGTCAATAGCCAGCGGGAAAGAGTTGGTTGCCCcggcgg                                                                                         >  1:2715544/1‑150 (MQ=255)
                                                               ccTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCcggcgg                                                                                         >  2:6143871/1‑150 (MQ=255)
                                                                   acggacgTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCC‑AGGCCCATTATTAACGAAGAGCAGCGCCCCCGTTTTTTCAAAAGCCACCCGTAAATCCGTGGTTACCCCCGCGGTAAc                                                                                     >  1:1392447/1‑150 (MQ=255)
                                                                   acggacgTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTGTATTTGC‑TGGACCATTATGAAAGACGAGCAGCGCCGCCGTTTTTTCAATAGCCACCGTTAAAGCGTTGGTTACCCCCGCCGTAAc                                                                                     >  2:8813154/1‑150 (MQ=255)
                                                                    cggacgTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTGCC‑GGGGCCGTTTTTAACCACGAGCAGCGCCCCCGGTTTTTCAAAAGCCACCGGTAAAACCTTGGTTCCCCCCCCGGGAAcc                                                                                    >  1:552332/1‑149 (MQ=255)
                                                                     ggacgTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCATTATGAACCACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCCGCGGTAACgg                                                                                   >  2:7563941/1‑150 (MQ=255)
                                                                     ggacgTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTTTTTGC‑GGGCCCGTTATGGACGACCCGCCGCGCCGCCGGTTTGTCAAACGCCCCCGGTAAAGCGGTGGTTCCCCCCGCGGGAACgg                                                                                   >  2:6519415/1‑150 (MQ=255)
                                                                         gTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCa                                                                               <  1:2197890/150‑1 (MQ=255)
                                                                              cgcgGTGACGGTGGTTAAAAAAGAGAGGGCCCAGGGGCAAAAGCCGAGTCGCTTTATTGCC‑TGGACCTTTATGACCGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCgg                                                                          <  2:3791117/150‑1 (MQ=255)
                                                                              cgcgGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCgg                                                                          <  2:8982031/150‑1 (MQ=255)
                                                                               gcgGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCggg                                                                         <  1:2385160/150‑1 (MQ=255)
                                                                                     aaGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTcgcg                                                                   <  1:6179993/150‑1 (MQ=255)
                                                                                        gtggtTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGccc                                                                <  1:344408/150‑1 (MQ=255)
                                                                                            ttAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAg                                                            <  2:5976542/150‑1 (MQ=255)
                                                                                            ttAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAg                                                            <  1:5967448/150‑1 (MQ=255)
                                                                                            ttAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAg                                                            <  2:3322215/150‑1 (MQ=255)
                                                                                            ttAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAg                                                            <  1:523256/150‑1 (MQ=255)
                                                                                             tAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCC‑TGGACCTTTATGAAACACGAGCACCCCCGCCGGTTTGTCCAACGCCAGCGTTAAATCGTTGGTTACCCCCGCGGGAACGGTTCAGCCGGGGTCGCGCCCGGAgc                                                           >  2:4375476/1‑150 (MQ=255)
                                                                                             tAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgc                                                           <  1:404381/150‑1 (MQ=255)
                                                                                              aaaaaaGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgca                                                          <  1:5347991/150‑1 (MQ=255)
                                                                                              aaaaaaGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgca                                                          <  2:1010049/150‑1 (MQ=255)
                                                                                                aaaaGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTTCC‑AGGACCGTTATGAAAGACGAGCAGCGCCGCCCTTTTGTCAATCGCCCGCGGTAAAGCGTTGGTTCCCCCCGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgcagg                                                        >  2:8174863/1‑150 (MQ=255)
                                                                                                aaaaGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgcagg                                                        <  1:6864961/150‑1 (MQ=255)
                                                                                                aaaaGAGAGGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAgcagg                                                        <  2:6285985/150‑1 (MQ=255)
                                                                                                 aaaGAGATGGCCCAGGGGCAAAAGCAGAGTCGCGTTATTTCC‑GGGACCTTTATGAACGACGCCCAGCGCCGCCGGTTTGTCAATCGCCCGCGTTAAAGCGTTGGTTCCCCCCGCGGTAACCGGTCAGCCCGGGTCGCGCCCGGCgcaggc                                                       >  2:8755688/1‑150 (MQ=255)
                                                                                                          gCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGa                                              <  2:6348175/150‑1 (MQ=255)
                                                                                                            ccAGGGGCAAAAGCAGAGTCGCGTTATTTCC‑GGGACCTTTATGAACGACGGGCAGCGCCCCCGGTTTGTCCATCGCCCGCGGTAAAGCGGTGGGTCCCCCGGCGGTAACGGGTCAGCCGGGGGCGCGCCCCGGGCAGGCCGCACCGGATa                                            >  2:2597406/1‑150 (MQ=255)
                                                                                                            ccAGGGGCAAAAGCAGAGTCGCGTTATTGCC‑AGGACCATTATGAACGACCAGCAGCGCCGCCCGTTTGTCCATAGCCAGCGGTAAAGCGGTGGTTCCCCCCGCGGTAACGGGTCAGCCCGGGGCGCGCCCGGAGCAGGCCCCACCAGATa                                            >  2:1067168/1‑150 (MQ=255)
                                                                                                              aGGGGCAAAAGCAGAGTCGCGTTATTGCC‑TGGACCCGTATGAACGGCCCGCCGCGCCCCCGGTGTGTCCAACCCCACCGGTAAAGCCGGGGGTCCCCCCGCGGGAACCGGGCAGCCCGGGGCGCCCCCGGAGCCCGCAGCAccagcgaag                                          >  2:7385167/1‑143 (MQ=255)
                                                                                                               ggggCAAAAGCAGCGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGt                                         <  2:2459395/150‑1 (MQ=255)
                                                                                                                  gCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTg                                      <  1:2506996/150‑1 (MQ=255)
                                                                                                                  gCAAAAGCAGAGTCGCTTTAGTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTg                                      <  1:7762659/150‑1 (MQ=255)
                                                                                                                      aaGCAGAGTCGCGTTATTTCC‑GGGACCTTTATGAACCACGAGCAGCCCCGCCGTTTTGTCAATCGCCAGCGGTAAAGCCTTTGTTCCCCCCGCGGTAAACGTTCAGCCCGGGGCGCGCCCGGAGCAGGCACCACCTGATAAGTCTGCAca                                  >  2:3735698/1‑149 (MQ=255)
                                                                                                                       aGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTg                                 <  1:4826194/150‑1 (MQ=255)
                                                                                                                       aGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTg                                 <  1:637566/150‑1 (MQ=255)
                                                                                                                       aGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTg                                 <  1:7112368/150‑1 (MQ=255)
                                                                                                                         cAGAGTCGCTTTATTTCC‑TGGACCATTATGAAACACGAGCAGCGCCCCCCTTTTTTCAATACCCAGCGTTAAAGCGTTTGTTACCCCCGCGGTAACCGTTCATCCGGGGTCGCGCCCCGAGCAGGCAGCACCTGATAAGTCTGCACAGgc                               >  2:5159261/1‑150 (MQ=255)
                                                                                                                             gTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGgcgcgc                           <  2:4599146/150‑1 (MQ=255)
                                                                                                                                gCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGaa                        <  2:4885297/150‑1 (MQ=255)
                                                                                                                                  tttATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAAcg                      >  2:2862269/1‑150 (MQ=255)
                                                                                                                                  tttATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAAcg                      >  1:6728671/1‑150 (MQ=255)
                                                                                                                                  tttATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAAcg                      >  1:5773942/1‑150 (MQ=255)
                                                                                                                                    tATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAAcgcc                    <  1:384958/150‑1 (MQ=255)
                                                                                                                                      ttGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAAcgcccg                  >  2:1520559/1‑150 (MQ=255)
                                                                                                                                       tGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAAcgcccgc                 >  2:4030719/1‑150 (MQ=255)
                                                                                                                                         cc‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACGCCCGCCa               >  1:8064683/1‑150 (MQ=255)
                                                                                                                                         cc‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACGCCCGCCa               >  1:327187/1‑150 (MQ=255)
                                                                                                                                             ggACCTTTATTAACGACGAGCAGCGCCGCGTTTTTGTAAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCGGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACGCCCGCCAGGt            <  1:7925846/150‑1 (MQ=255)
                                                                                                                                             ggACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACGCCCGCCAGGt            >  1:5675187/1‑150 (MQ=255)
                                                                                                                                              gACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACGCCCGCCAGGTc           <  2:6649992/150‑1 (MQ=255)
                                                                                                                                              gACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACGCCCGCCAGGTc           <  2:5437128/150‑1 (MQ=255)
                                                                                                                                               aCCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGTTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTTATAAGTCTGCACTGGCGCGCGAACGCCCGCCAGGTCg          <  1:1036809/150‑1 (MQ=255)
                                                                                                                                                  tttATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACGCCCGCCAGGTCGaaa       >  1:119939/1‑150 (MQ=255)
                                                                                                                                                       |                                                                                                                                                     
CAGGTGATGTGGTTTACATCACTGGTATCTCGTGGTGAAAACTTACCGCCGTTGTATCGTG‑CCCTGACGGACGTGGGCGCGGTGAAGGTGGTTAAAAAAGAGATGGCCCAGGGGCAAAAGCAGAGTCGCTTTATTGCC‑TGGACCTTTATGAACGACGAGCAGCGCCGCCGTTTTGTCAATCGCCAGCGTTAAAGCGTTGGTTCCCCCGGCGGTAACGGTTCAGCCGGGGTCGCGCCCGGAGCAGGCAGCACCTGATAAGTCTGCACTGGCGCGCGAACGCCCGCCAGGTCGAAATGTTT  >  NC_000913/843067‑843365

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑