| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,504,867 | T→A | 16.4% | intergenic (+84/+68) | frlR → / ← yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,504,867 | 0 | T | A | 16.4% | 408.8 / 18.4 | 212 | intergenic (+84/+68) | frlR/yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (27/138); new base A (41/3); total (71/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.03e-22 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 217 total aligned reads displayed.
ACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCG > NC_000913/3504729‑3505006 | aCTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑Ta < 1:852079/140‑1 (MQ=255) tcttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCC‑aaaa > 1:865624/1‑139 (MQ=255) tcttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCC‑TAAc > 2:819112/1‑140 (MQ=255) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAAcc < 1:444337/140‑1 (MQ=255) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAAcc < 1:236108/140‑1 (MQ=255) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAAcc < 2:176116/140‑1 (MQ=255) ttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑AAAccc > 2:942459/1‑140 (MQ=255) ttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑AAAccc > 2:610323/1‑140 (MQ=255) ttctGCCGCGCCAATCGCATCACCTTAACAAGAGATAATAACAGACATTAACCGTAGGCCGGATAATATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGGGGAATGTTACATCCCGGACGATACCCACACCC‑AAAacc > 2:603752/1‑140 (MQ=25) tctGCCGCGCCATTCGCTTCAGCTTTTCTTTTGATTATTATAGTCATTATCCGTAGGCCGGTGAAGTGGCGCCTGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGGACGTTCCCCTCACCC‑TAACCct < 2:1231454/140‑1 (MQ=255) tctGCCGCGCCAATCGCATGACCTTATCTATTGTTAATATAAGACATTAACCGTAGGCCGGATAAGTTGCGCCTGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCct < 2:1086117/140‑1 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCct < 1:157349/140‑1 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCct < 2:159986/140‑1 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCct < 1:870736/140‑1 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCct < 1:1099759/140‑1 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCct < 1:632425/140‑1 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCct < 1:567862/140‑1 (MQ=255) tctGCCGCGCAAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGTATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCct < 2:51119/140‑1 (MQ=255) tctGCCGCGACAATCGCATCACCTTAACTATTGATAATAAATGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCct < 2:41706/140‑1 (MQ=255) ctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCGCACCC‑AAAcccgc > 1:756026/1‑138 (MQ=255) ccGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCC‑AAAaccacacc > 1:601709/1‑135 (MQ=39) cgcCAATCGCATCACCTTTACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCa < 1:504236/140‑1 (MQ=255) cgcCAATCGCATCACCTTCACTATTGATACTAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCa < 1:459221/140‑1 (MQ=255) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCa > 2:1191420/1‑140 (MQ=255) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTATGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCaaa < 2:800951/140‑1 (MQ=255) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑AAAACCAC‑ACCCCaaa > 1:469606/1‑140 (MQ=255) caTCGCATCACCATACCTATTGATAATAAAAGACATGAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAgg < 2:916428/139‑1 (MQ=255) aaTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAgg < 2:1060340/140‑1 (MQ=255) cGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGc < 1:414122/140‑1 (MQ=255) cATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGa < 1:779312/140‑1 (MQ=255) ccatAACTATTGAAAATAAAAGACACTACCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGa < 2:404904/137‑1 (MQ=255) ccTTAACTATTGATAATAATAGACATTAACCGTTGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGTTGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGa < 2:1068758/140‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGa < 2:764242/140‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGa < 1:874731/140‑1 (MQ=255) acTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGa < 2:15750/139‑1 (MQ=255) cTTAACTATTGATAATAAATGACATTAACCGGAGGCCGGATAAGATGCGCCAGCATCGCATCCTGCGATGCTGGCGCGTTGAAATTTACATCCCGTACGTTCCCCTCACCC‑TATACCTC‑TCCCCAAAGGGGCGAGGGGaa > 2:1074794/1‑139 (MQ=39) tAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑AAACCCTC‑ACCCCAAAGGGGCGAGGGGACCg > 2:582546/1‑140 (MQ=255) tAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCC‑TAACCCAC‑AACCCAAAGGGGCGAGGGGAccc > 2:967798/1‑139 (MQ=255) acaaTTGATAATAAAAGACATGAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCGTCACGC‑TAACCCTC‑TCCCCACAGGGGCGAGGGGACCGta < 2:1072302/137‑2 (MQ=38) aCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGtt < 1:1211233/140‑1 (MQ=255) aCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGtt < 2:1006652/140‑1 (MQ=255) aCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGtt < 1:322623/140‑1 (MQ=255) cTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTc < 1:645197/140‑1 (MQ=255) cTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTc < 1:715909/140‑1 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTa < 1:817250/140‑1 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTa < 1:583584/140‑1 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTa < 1:401219/140‑1 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTa < 1:773753/140‑1 (MQ=255) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCC‑AAAACCAC‑ACCCCAAAGGGGCGAGGGGACCCTTCATTa > 2:300683/1‑140 (MQ=38) tGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCC‑AAAACCAC‑AACCCCAACGGGCGGGGGGACCGGTAAGTa > 1:987619/1‑140 (MQ=37) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCCCACCC‑AAAACCAC‑AACCCCAAGGGGCGGGGGGTCCGGTAAGTAc > 1:364020/1‑140 (MQ=37) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCAAACCCAAAACCCAA‑AACCAAAAGGGGGGGGGGGGCCGtaagtaa > 1:680987/1‑134 (MQ=21) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCC‑TAAACCGC‑ACCCCAAAGGGGGGAGGGGGCCGGTCAGTAc > 1:452042/1‑140 (MQ=38) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCAGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCACAAACC‑AAACCCAC‑AACACAAAGGGGGGTGGGGAACAGTCAGTaa > 1:249321/1‑139 (MQ=25) ataataAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACg < 2:375133/140‑1 (MQ=255) aataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGAACGTTCCCCTCACCC‑TAACCCTA‑ACCCCAAAGGGGCGATGGGACCGTTCATGACGGa > 2:201984/1‑140 (MQ=38) taaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCC‑AAAACCAC‑ACCCCAAAAGGGGGGGGGGTCCCTTCAGTAAAGAAt > 1:91193/1‑140 (MQ=25) aaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCGCACCC‑TAACCCAC‑TCCCCAAAGGGGCGAGGGGACCCGTAAGTACGGAAATTa > 2:929340/1‑140 (MQ=38) aaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCAGTACGTTCCCCTCACCC‑TAACCCTC‑ACCCCAAAGGGGCGAGGGGACCGTTCACTACGGAAATTa > 1:1084970/1‑140 (MQ=255) aTTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCACAACC‑AAACCCAC‑AACCCAAATGGGCGGGGGGGCCCGTCAGTAAGGAAATTAGCGTg > 1:803830/1‑140 (MQ=25) ttAACCGTAGGCCGTATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 2:455441/140‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCTTCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 2:1056625/140‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 1:1006993/140‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 1:522326/140‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 1:1078286/140‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 1:701051/140‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCAC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 1:835607/140‑1 (MQ=255) attaCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTAGACTTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCCC‑TCCCCCAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGa < 2:223762/137‑1 (MQ=39) cGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTg < 2:119598/140‑1 (MQ=255) tAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCGCACCC‑AAACCCTC‑TACCCCAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCGTGAACGTGCt > 2:86706/1‑140 (MQ=38) ggCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCC‑AAACCCACAACCCCAAGGGGCCGGGGGGCCCGTCCCGAACGAATTTAAGCATGACgtgcgat > 1:206722/1‑134 (MQ=19) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACTTCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 2:637693/140‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 1:792448/140‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATc < 1:892285/140‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCC‑TAAACCAC‑ACCCCAAAGGGGCGGGGGGACCGTTCAGTACGGAAATTAGCATGACGGTGCTAACCCGc > 2:1016702/1‑140 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTAACCGAACCC‑GAAACCAA‑GCCACCAAGTGGGGGTGGGACCGGTCATTACCGAATTTATGGTGAACGTGCTATACAgg > 1:18100/1‑139 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCC‑AAAACCAC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCa > 2:81179/1‑140 (MQ=255) aaGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCAtt < 1:491826/140‑1 (MQ=255) gATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTGACCACAACC‑GATCCCAC‑TGCCCCCAGGGGGGAGGGGTACGGTCAGTACGGGATTTTGCTTGTCGGTGCGATAAAGCATTat > 1:195360/1‑139 (MQ=255) tGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCCAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGAGCTATCCAGCATTAAAt < 2:562478/140‑1 (MQ=255) tGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAAt < 1:35524/140‑1 (MQ=255) tGCGCCAGCATCGCATCCGGCGAAGCTGGCGCGTAGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCCC‑TCCCCAAACGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAAt < 1:579108/140‑1 (MQ=255) cgcCAGCATCGCATCCGGCGTTGCTGGCGCGTTGAATTTTACATCCCGTACGTGCCCCTCACCC‑TAACCCTC‑TCCCCCATGGGGCGGGGGGACCGGTCAGTACGGAATTTAGCGGGACGGTGCTATCAAGCAtgataaac > 2:1183071/1‑133 (MQ=255) cgcCAGCATCGCATCCGGCGATGCTGGCGCGATGAATTTTACAACCCGTACGTTCCCCTCCCCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATAc < 1:1031682/140‑1 (MQ=255) catcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCACACCC‑TAACCCGC‑ACCCCAAAGGGGCGAGGGGACCGTTCAGTACGGTATTTAGCTTGACGGTGCTATCCAGCGTTAAATACTGGCAATAcac > 2:841676/1‑138 (MQ=38) gCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑GAACCCTC‑ACCCCCAAGGGGCGAGGGGACCGTTAAGTACGGAAATTAGCTTGACGGTGCTATCCAGCATTAAAAACTGGCAATACTCTCACGCAAAAt > 2:498756/1‑140 (MQ=38) gcgcGTTGAATTTTACATCCCGTACGTTCCCCACACCC‑AAACCCAC‑TACCCAAAGGGGCGAGGGGACCGGTGAGTACGGTAATTAGCTTGAAGGTTCTATCCAGCATTAAATAATGGCAATACTCAAAAGCAAAATACgc > 2:69031/1‑140 (MQ=255) cgcgTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgca < 1:953165/140‑1 (MQ=255) cgTTGAATTTTACATCCCGTACGTTCCCCTCCCCC‑TAACCCTC‑TCCCCAACGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAATTACTGCCAATACTCTCACGCAAAATCCgcagc < 2:991988/140‑1 (MQ=255) atGAATTTTACCTCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCAc < 2:1137183/139‑1 (MQ=255) tGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGcccc < 1:1140025/140‑1 (MQ=255) tGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCAcc < 1:309877/140‑1 (MQ=255) tGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCAcc < 1:1200694/140‑1 (MQ=255) aTCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGAAAAATCCGCAGCACCGTCTCTTCAc < 2:351354/140‑1 (MQ=255) gTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCTAAGCGGCGAGGGGACCGTTGAGTACGGAATTTAGATTGACGGTGCTATCCAGCATTAAATTCTGGCAATACTCTCACGCTAAATCCGCAGCACCGTCTCTTCACCGCTg < 2:331658/140‑1 (MQ=39) gTACGGTCCCCTCACCC‑TAACCCTC‑TCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCATGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTg < 2:434475/140‑1 (MQ=255) tACGTTCCCCTCACCC‑TAACCCAC‑TCCCCAAAGGGGCGAGGGGACCGGTCAGTAAGGAATTTATCTTGACGGTGCTATCCAGCATTAAAAACTGGCAATACTCTCACGCAAAAACCCCAGCACCGTCTCTTCACCGCTGc > 2:376994/1‑140 (MQ=38) tACGTTACCCGCACCC‑TAACCCTC‑TCCCCAAAGGGGCCAGGGGACCGTTCAGTACGGAATTAAGCTTGAAGGTGCTATCCAGCAGAAAATAAGGGCAATACACACAAGCAAAAAACCCCGCACCGGCTATACAACGCAGc > 2:1149029/1‑140 (MQ=255) ccacACCC‑AAAACCAC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACCGAAATTAGCATGACGGTGCTAACCAGCATTAAATACAGGCAATAATCTCAAGCAAAATCCGCAGCACCCTAACTTCACCGCAGCCATTCggg > 2:832888/4‑140 (MQ=255) cTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGt < 2:241367/140‑1 (MQ=255) | ACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCC‑TAACCCTC‑TCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCG > NC_000913/3504729‑3505006 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |