| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 164,581 | A→C | 25.6% | intergenic (+47/‑149) | hrpB → / → mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 164,581 | 0 | A | C | 25.6% | 227.4 / 51.2 | 193 | intergenic (+47/‑149) | hrpB/mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Reads supporting (aligned to +/- strand): ref base A (60/81); new base C (7/45); total (67/126) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.43e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 195 total aligned reads displayed.
CCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCA > NC_000913/164432‑164730 | ccGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa < 2:5410923/150‑1 (MQ=255) cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt > 2:1687869/1‑150 (MQ=255) cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt < 2:5308621/150‑1 (MQ=255) cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt < 2:4217213/150‑1 (MQ=255) cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt > 2:6870721/1‑150 (MQ=255) cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt > 2:7019471/1‑150 (MQ=255) tGCAAAAAGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAgcgcg > 2:3990884/1‑150 (MQ=255) tGCAAAAAGAGATGAAAGGGCGTTATCACAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTAGTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAgcgcg > 2:6522288/1‑150 (MQ=255) cAAAAAGAGATGAAAGGGAGTTATCCCAAACA‑TGTCTGGACGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCa > 1:6026056/1‑150 (MQ=255) aaaaGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACg > 2:7460188/1‑150 (MQ=255) aaaaGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACg > 1:6993587/1‑150 (MQ=255) aaaGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGt > 1:7354329/1‑150 (MQ=255) agagATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgc > 1:7467687/1‑148 (MQ=255) agagATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTtc > 1:3441430/1‑150 (MQ=255) aTGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTtcgccc > 1:2979721/1‑150 (MQ=255) aTGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTggaccc > 1:6112502/1‑150 (MQ=255) tGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgggcccc > 1:570281/1‑143 (MQ=255) aatgggCTTTATCCAAAACA‑TGTCGGGCCGGACGCCCCGCAAAA‑TACTCCCCCGCCGCGACGGACTAAAATTTTTTCTTATGTTTGTTTTTCACCCTCTCCGTGGGGGTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTtcaccctca < 2:2178275/147‑1 (MQ=255) aGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTtggcccacacc > 2:352982/1‑150 (MQ=255) aGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGggacccgcacc > 1:6848742/1‑150 (MQ=255) gggCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTATGGTTGGTTTTCGCCCTCTCCCTGTGGGAGAGGGCGGGGGTGAGGGCATCAGCGCGCACGTtcaccctcaccc < 2:5311254/150‑1 (MQ=255) ggCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTggacccgcccccc > 2:6061707/1‑149 (MQ=38) ttATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAAcc < 2:5566231/150‑1 (MQ=255) ttATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGGCCCGCACCCAAAcc > 1:4537206/1‑150 (MQ=38) aTCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTgggcccccaccccccaccc > 2:3661375/1‑143 (MQ=38) aTCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCAAAacca > 2:4692926/1‑149 (MQ=255) acccAAAAATTGTCGGGCCGGACGCCCCGCAAAA‑AACGGCCCCGCCGCGCCGGACTAAAATTTATTCTTAGGGTGGTTTTTCCCCCTCCCCCGGGGGGAGGGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCct < 1:6030172/149‑1 (MQ=255) ccAAACT‑TGTCGGGCCGGACGACCCGTCAAA‑TCCTGCACCGACGCGACGGACGAAAATGTTTTGGTATGGTTGGTTTTCTCCCTCTCCCGGGGGGAGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCtctc < 2:6090762/150‑1 (MQ=37) caaaaCT‑TGTCGGGCCGTACGACCCGGAAAA‑TACTCCACCGACGCGACGTACTAAAATTTTTTCGTATGTTTGTTTTTCTCCCTCTCCCTGTGGGAGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCtctc < 2:5909500/148‑1 (MQ=25) caaaaCA‑TGTGGGGCGGGCCGACCGGTCAAT‑TACTGCCCCGACGCGCCGGACTAAAATGTTTTGTTATGGTTGGTTTACCCCCTCCCCGTGGGGGTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCtctc < 2:4310688/148‑1 (MQ=255) aaaCA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGTCCCCCACCCCAAaccacaacc > 2:245186/1‑144 (MQ=37) aaaCA‑TGTCTGGCCGGACGACCCGCCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCGCCCTGTGGGAGAGGGACGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTccc < 2:4585300/150‑1 (MQ=255) aaccctGTCGGGCCGGACGCCCCGGCAAA‑TACTGCACCGACGCGACGGACGAAATATTATCGGAATGGTGGGTTTGCTCCCTCCCCCGGGGGTTGGGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTccc < 2:5041571/145‑1 (MQ=255) tGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCACACACACCCAAACCCACTCCCACAAg > 1:6300272/1‑150 (MQ=38) ggtggggCCGGACGACCGGGCACA‑TACGGCCCCGCCGCGCCGGCCGAAAAAGTATTGGTATGGTGGGTTTTCTCCCTCGCCCGGGGGGAGCGGGCGGGGGTGCGGGCCTCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAg < 2:293317/145‑1 (MQ=255) gTCTGGCCGGACGACCCGGCAAA‑AACTGCACCGACGCGACGTACCAAAAATTATTCTTAAGGTTGGTTTTCCCCCTCTCCCTGTGGTAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAgg < 2:1789872/150‑1 (MQ=38) tCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAGCAGCGCGCACGGGCACCCGCACCCAAACCCACACCCGCCAggg > 2:8171921/1‑150 (MQ=37) cTGGCCGGCCGCCCCGCCAAT‑TACTCCACCGACGCGCCGGCCTAAAAAGTTTTCGTATGGTTGGTTTACTCCCTCACCCGGTGGGAGTGGGCCGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGga < 1:6873427/150‑1 (MQ=255) tGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTGGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCCACCGCCCCCCAACCCACGCCCACAAGGgag > 2:4702660/1‑150 (MQ=37) ggCCGGACGACCCGGCAAA‑TACGGCCCCGCCGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTGCGCCCGCCCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGgaga < 2:4637577/150‑1 (MQ=38) ggCCGCCCGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATGCGTACGGTTGGTTTTCTCCCCCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTTGAGGgaga < 1:6103928/150‑1 (MQ=38) gCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCTAACCCAAACCCTCAAGGGagag > 2:7287283/1‑150 (MQ=255) gCCGGACGACCCGGAAAC‑TCCTGCACCGACGCTACGCACGAAAATTTATTCGTATGGTTGTTTTACCCCCTCCCCCTGTGGGTGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTTGAGGGagag < 1:4873490/150‑1 (MQ=255) cccGGACGACCCGGCCCC‑TACTGCACCCACGCGCCGGACGACAACGTATGCGTATGGTTGGTTTTCCCCCCCCCCCGGGGGGAGAGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGagag < 2:795209/149‑1 (MQ=255) cGGACGCCCGGTAAAA‑TACTGCACCGCCGCGACGTACTAAAATTTTTTCGTATGGTTGTTTTTCTCCCTCTCCGTGTGGGTGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTTGAGGGAGAggg < 1:2853805/150‑1 (MQ=255) cGGACGACCCGGCAAA‑TACTGCACCGAGGCGACGGACGAAAAAGTTTTCGTATGGTTGGTTTTCTCCCACCCCCTGTGGGTGAGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAggg < 2:1931074/150‑1 (MQ=255) cGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCGCCCGCACCCACACCCACACCCACAACGGGGAggg > 1:5093514/1‑150 (MQ=37) ggACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGTTGAACCACACCCAAACCCACACCCCCCACGGGGAgggg > 1:1365179/1‑150 (MQ=37) gacCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCGCACCCAAACCCGCTCCCACCAGGGAGAGGGGCCCg > 2:4881150/1‑150 (MQ=38) cccGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGCCCCCCCACCCAAACCCCCACCCCCCAGGGAGGGGGGGCCgcg > 1:6356193/1‑148 (MQ=25) ccGGCAAA‑TACTGCCCCGACGCGACGGACTAAAAATTATTCGTATGGTTGGTTTCCCCCCTCCCCCTGTGGGAGCGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATc < 2:8148659/150‑1 (MQ=255) ccGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGGAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGGGAGGGCATCAGCGCGCACGGTCGCGCCCCCCCCAACCCACGCCCGCAAGGGCggggggggggcgc > 1:2367247/1‑143 (MQ=25) ccgCAAATTACTGCCCCGAGGCTCCGGACTAAATTTTTTTGTTATGGTTGGTTTTCCCCCTCCCCGTGGGGGTGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATc < 1:6570261/148‑1 (MQ=255) cGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGACCCACACCCTAACCCACACCCACCAGGGGGAGGGGGCCCATCg > 1:6259963/1‑150 (MQ=37) gaaaa‑TCCTGCACTGCCGCGACGTACTAAAACTTATTGTTCTGTTTGGTTTTCCCCCCCTCCTTGTGGGTTAGGGCCGGGGTGCGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 1:7019471/148‑1 (MQ=255) gaaaa‑CACTGCACCGCCGCGACGGACGAAATAGTATTCTTCCGGTTGTTTTCCCCCCACACCCTGTGGGAGCGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 1:1327397/148‑1 (MQ=255) cAAA‑TCCTGCCCCGACGCGCCGGCCTAAAAAGTATTCGTAAGGTTGGTTTTCGCCCTCCCCCTGGGGGTGTGGGCCGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGc < 2:6810620/150‑1 (MQ=255) aaa‑TACTGCACCGACGCGACGGACGAAAATGTTTTGGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGca < 2:4930660/150‑1 (MQ=255) cTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGACCCTCACCCGAACCCGAAACCGCAAGGGTGTGGGGTGCGATAGAGGACAAAt > 1:7499453/1‑150 (MQ=25) cTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCAAAAACACAACCACAAGGGAGATGGGACCCATCGAGAACAAAt > 2:7734226/1‑150 (MQ=25) tGCACCGACGCTACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAtt < 2:4762457/150‑1 (MQ=255) ggccccgccgCGACGCACTAAAATTTATTCTTTTGGTTGTTTTTCCCCCCCCCCGGGTGGGCGCGGGCGGGGGGGCGGCCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAtt < 1:797503/146‑1 (MQ=255) cccGACGCGAGGGACCAAAATTTATTGGTAAGGTTGTTTTTCTCCCGCACCCTGTGGGTGTGGGCGGGGGTGTGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTg < 1:2605190/149‑1 (MQ=255) ccgccgCGACGTACTAAAATTTATTGGTATGGTTGTTTTTCTCCCCCGCCGTGTGGGTGTGGGCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 1:8199528/150‑1 (MQ=255) ccgccgCGACGGACGAAAATGAATTCTTACGGTTGGTTTTCGCCCTCGCCCTGTGGGAGTGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 2:6683029/150‑1 (MQ=255) ccgccgCGACGGACCAAAATTTATTGTTAGGGTGGTTTTTCGCCCTCGCCCTGGGGGCGCGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 1:2438516/150‑1 (MQ=255) gacgcgacgGACGAAAAAGTTTTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCGGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTgaga < 2:8320199/150‑1 (MQ=255) ggacgAAAAAGTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtctt < 1:7698925/150‑1 (MQ=255) ggacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGGCCCCCACCCAAAACCACACCCCCAACGGGGGGGGGGCCGAACGCGCCCAAAATTTTTGAGATAtatt > 1:974418/1‑150 (MQ=18) ggacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTGGGCCCGCGCCCCAAACCACAACCACAAAGGAGAGGGGGCCGCGAGAGCACCAAATTTgtgaggtttaat > 1:3780794/1‑143 (MQ=16) ggacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTCCACCCGCACCCAAAAACACAACCAAAAAGGGGGGGGGGCCCATCGAGCCCAAAATTTTATAGATAtatt > 1:4267577/1‑150 (MQ=16) gAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGTTCCCCCGCCCCCAAACCCACACCCACAAGGGCGCGGGGACCCCTCGCGCCCAAATTTTGAGAGATAtcttcttc > 2:2084662/1‑150 (MQ=25) aaaaGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCACACCCAAACCCGCACCCACAACGGCGAGGGGGCCCCTACAGCACAAATTATGAGAGAAATCTTATTATg > 2:4527098/1‑150 (MQ=21) gTATTCGTATGGTTGGTTTTCGCCCTCGCCCTGTGGGAGCGGGCGGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCtt < 2:5025023/150‑1 (MQ=255) tagccGTAAGGTTGGTTTTCGCCCGCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTg < 2:4490259/146‑1 (MQ=255) tATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGTGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTg < 1:8369731/150‑1 (MQ=255) tCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTaa < 2:6305760/150‑1 (MQ=255) gTATGGTTGGTTTTCTCCCTCTCCCTGTGGGTGAGGGCCGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACa < 2:7210112/150‑1 (MQ=255) gTAAGGTTGGTTTTCTCCCTCTCCCCGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACa < 2:4934525/150‑1 (MQ=255) tggttgtttTTCTCCCTCGCCGTGTGGGCTTGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaa < 2:3199411/149‑1 (MQ=255) agtttggttTTCTCCCTCTCCCTGTGGGAGTGGGCCGGGTTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACagaa < 1:4441059/147‑1 (MQ=255) ttggttTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTGAACCGCACCCAAAACCACACCCCCCAGGGGGTGGGGCCCGAGCGAGCCCAAAAGTTGTGAGATAAGTTATTGTGTGTTGTTAGAgaagaa > 2:850550/1‑150 (MQ=12) ttggttTTCGCCCCCTCCCTGTGGGATAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAgaagaa < 1:1878006/150‑1 (MQ=255) tggttTCCTCCCCCTCCCTGTGGGAGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAAc < 1:5874214/150‑1 (MQ=255) tccctctccctGTGGGTGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATc < 2:5490067/150‑1 (MQ=255) ccctctccctGTGGGAGAGGGCCGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCg < 1:8343241/150‑1 (MQ=255) cctctccctGTGGTAGCGGGCGGGGGTGTGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCgg < 2:115883/150‑1 (MQ=255) cctcgccatGTGGTAGTGGGCCGGGGTGTGGGACTCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCgg < 2:7354329/150‑1 (MQ=255) ggggcgtgggCGGGGGGGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgcgc < 1:7287283/143‑1 (MQ=255) ggAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCt < 1:3990884/150‑1 (MQ=255) agagGGCCGGGGTGAGGGCATCAGCGCGCACGTGCACCCGCCCCCAAAACCGCACCCACAAGGGGGGGGGGTCCCGTAGAGCACAAAATTTGTGGGATATAATATTATGTCTTGTAACACAAAAACAAAAAAAAGGGCGGTTGGGCCAGa > 2:1372014/1‑150 (MQ=255) ggCCGGGGTGAGGGCATCAGCGCGCACGTTCCCCCCCCCCCCAACCCACACCCACAACGGACAGGGGCCCGAACCAGCCCCAAATTTGAGATATAAAATAATATGTCTTGTAAAACAACAAAACAAAAACCGGCGTTTTCGccagtaaat > 2:1282281/1‑143 (MQ=255) gcgggggTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATAtt < 2:570281/147‑1 (MQ=255) gCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATAtt < 1:7915150/150‑1 (MQ=255) ccGGGGTGCGGGCATCAGCGCGCACAGTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTg < 1:1853170/150‑1 (MQ=255) cGGGGTGCGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGc < 2:947537/150‑1 (MQ=255) ggggTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 2:4537206/150‑1 (MQ=255) ggTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGga < 2:5246802/150‑1 (MQ=255) ggCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGaaaaa < 1:2068452/150‑1 (MQ=255) cATCAGCGCGCACGTTCACACTCACCCTATCCCTCTGCCTAAAGGGAGAGGGGACCGATCGAGCACTAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGTAATAGc < 2:6026056/150‑1 (MQ=255) | CCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACA‑TGTCTGGCCGGACGACCCGGCAAA‑TACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTTCACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAAGCA > NC_000913/164432‑164730 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |