| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,233,709 | A→C | 5.5% | intergenic (+26/+19) | fadH → / ← higA | 2,4‑dienoyl‑CoA reductase, NADH and FMN‑linked/antitoxinof the HigB‑HigA toxin‑antitoxin system |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,233,709 | 0 | A | C | 5.5% | 1141.8 / 2.5 | 400 | intergenic (+26/+19) | fadH/higA | 2,4‑dienoyl‑CoA reductase, NADH and FMN‑linked/antitoxinof the HigB‑HigA toxin‑antitoxin system |
| Reads supporting (aligned to +/- strand): ref base A (209/147); new base C (2/32); total (219/181) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.16e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 418 total aligned reads displayed.
GCTGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATCGG > NC_000913/3233560‑3233858 | gcgggCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCaa < 2:5787546/147‑1 (MQ=255)gcTGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCaa < 2:4333543/150‑1 (MQ=255) cTGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑c < 2:3341305/150‑1 (MQ=255) tGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑Cg > 1:4599846/1‑150 (MQ=255) tGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑Cg < 2:6793090/150‑1 (MQ=255) gcAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATc > 1:1418598/1‑150 (MQ=255) aCCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCgg > 1:4218512/1‑150 (MQ=255) gCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCAc > 1:5751348/1‑150 (MQ=255) gCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCAc > 1:8411072/1‑150 (MQ=255) gCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCAc > 2:4972385/1‑150 (MQ=255) attgatAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGTAA‑CGCATCCGGCACGTcg > 2:1833726/1‑150 (MQ=255) gatAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGt > 2:875852/1‑150 (MQ=255) gCGGTAAAACTGTGCATTTATTTGGGGGCTGCTTTGTGGCTTTGGAGCTGGACGCACGACGGGCATTTG‑CCCTGGGAACACGGCGGGCGCTGTTTATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAAt < 2:4232954/150‑1 (MQ=255) gCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCCATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TGATTTGAAGCGCCGGATGCAC‑CGCATCCGGCACGTCGCGTTacg > 1:6910473/1‑148 (MQ=255) gCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAAt > 2:4088281/1‑150 (MQ=255) cGGTAAAAGGGTGCTTTTATTTGGGGGCTGCGTTGTGGCTAGGGAGCTGGACGCACGAGGGGCATTGG‑CCCCGGGAACCCGGGTGGCGGTGGAGTTTTAAATCG‑TTATTTGAAGCGCCGTATGCAA‑CGAATCCGGCACGTCGCGTTAATc < 2:398088/150‑1 (MQ=255) cGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATc > 1:4415889/1‑150 (MQ=255) gTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGACCACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAg > 1:5626433/1‑150 (MQ=255) gTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCGGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTCAATCAATAAACAAg < 2:7027434/150‑1 (MQ=255) tGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAgg > 1:1999959/1‑150 (MQ=255) ggcttttATTGGGGGGCTGGGATGTGGCTTGGGTGGGGGACGCCGGCCGGGAATTTG‑CCCAGGGAACTCGGCGGGGGCTGTAGTTTTTATTGG‑TTATTTGACGCGCGGTTTGCAA‑CGCATCGGGCACGTCGCGTTAATCAATTAACAAgg < 2:5872686/146‑1 (MQ=255) tttAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCggg > 1:993867/1‑150 (MQ=255) tGGCGGCTGCGTTGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGTTTTAAATCG‑TTATTTGACGCGCCGGATGAAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAAt < 2:8352797/150‑1 (MQ=255) gcTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGa > 1:688806/1‑150 (MQ=255) gttggggCTATGGAGCTGGCCGCACGCCGGGATATTG‑CCCAGGCAACCCGGCTGGCGCTGTATTTTTAAATCT‑TTATTTTAAGCGCCGGAGGCAA‑CGAATCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATcgc < 2:7953206/145‑1 (MQ=255) gATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATcgc > 1:8033564/1‑150 (MQ=255) ggCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGc > 1:6363437/1‑150 (MQ=255) tctGGTGCTGGACGCACGCCGGGAATTTG‑CCCTGGTAACCCGGCTGGGGCTGTATATTTAAATGG‑TTTTTTGACGCGCCGTTTGAAA‑GGAATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCaa < 2:2357771/148‑1 (MQ=255) tATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCaa > 1:122614/1‑150 (MQ=255) tATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCaa > 2:8231716/1‑150 (MQ=255) ctGGCGCTGGACGCCCGCCGGGCAATTG‑CCCTGGGACCACGGCTGGCGGGTTAGATTTAAATCG‑TTATTTCAAGCGCCGCAGGCCA‑CGCAACCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAAt < 2:1227786/149‑1 (MQ=255) tggcgggggACGCACGACGGGCAATGG‑CCCAGGTACCCCGGCGGGCGCTGGAGATTTAAATCG‑TTCTTTGACGCGCCGGAGGCAA‑CGCATCGGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAAtt < 2:5526853/143‑1 (MQ=255) tGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAAtt > 2:5141563/1‑150 (MQ=255) tGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAAAAAACAAGGCGGGAGAAAAGCCGAATCGCGTTGCCAAtt > 2:4549705/1‑150 (MQ=255) tGGAGCAGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAAGGCCGAATCGCGTTGCCAAtt > 2:8164965/1‑150 (MQ=255) gAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAAtttt > 2:3135983/1‑150 (MQ=255) gCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAAtttttt > 1:264258/1‑150 (MQ=255) cTGGCCGCACG‑CCGGCAATTGCCCCTGGTAACACGGCTGGCGGTGGATATTAAAATGT‑TTTTTGGACGCGCCGGATGAAC‑CCCACCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTa < 1:2744727/150‑1 (MQ=255) ggACGACCGACGGGCATTGG‑CCCTGGTCACCCGGCGGGCGGGGGTGATTTAAATCG‑GTTTTTGACGCGCGGGTTGCAA‑CGCTTCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGc < 2:6757118/150‑1 (MQ=255) gACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCCATTTTTTAGCg > 2:5365016/1‑150 (MQ=255) gACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCg > 1:782342/1‑150 (MQ=255) gACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCg > 2:6908699/1‑150 (MQ=255) ccGCACGCCGGGATCTGG‑CCCAGGGACCACGGGCGGCGGGGGAGATTAAAAGCG‑TTTTTTCCCGCGCGGGATCCAA‑CCCAGCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCgt < 2:3028929/149‑1 (MQ=255) ccGCACGACGGGCATTTG‑CAAAGGGAACACGGGGGGCGCTGTAGATTTAAATGG‑TTATTTGAAGCGCCGGAGGCAC‑CGCACCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCgt < 2:1989988/149‑1 (MQ=255) gCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCgtgt > 2:6364896/1‑150 (MQ=255) gCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCgtgt > 1:2220028/1‑150 (MQ=255) ccgGGCATTTG‑CCCAGGGAACACGGCTGGCGCTTGTCTTTTAAATCG‑TTTTTTGAGGCGCCGGTTGCAA‑GGAATCGGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAg < 2:7591270/149‑1 (MQ=255) cgGGCCTTTG‑CCCTGGGAACCCGGCGGGCGCTGTAGTTTTAAATCG‑TTATTGGCCGCGCGGGATGCAC‑CGCAGCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGc < 2:8071459/150‑1 (MQ=255) cgGGCAAGTG‑CCCCGGCACCCCGGCTGGCGGGTTTTATTTAAAGCG‑TTATTGCACGCGCGGGA‑GCAACCCCACCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGc < 1:3083722/150‑1 (MQ=255) gggCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGACGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCg < 2:5579070/150‑1 (MQ=255) gtaattgg‑CCCTGGGACCCCGGCGGGCGCTGGATATTTAAATCT‑TTATTGGCCGCGCCGGCTGCAC‑CGCAGCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGt < 2:7112301/143‑1 (MQ=255) ggCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGt > 1:831968/1‑150 (MQ=255) gCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGtt > 2:2539333/1‑150 (MQ=255) cAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTa > 2:1511492/1‑150 (MQ=255) cAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTa > 2:2080361/1‑150 (MQ=255) cAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTa > 2:7470912/1‑150 (MQ=255) aaTTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTaa > 2:4012844/1‑150 (MQ=255) g‑CCCTGGGAACCGGGGTGGCGGTGGTTATTTAACTCT‑TTATTTGACGCGCGGGTTGCAC‑CGCATCGGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTc < 1:1054545/150‑1 (MQ=255) g‑CCCAGGCAACCGGGCGGGCGCTGGAGATTAAACTCG‑TTTTTTGCCGCGCCGGATGCAA‑CGCAGCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTc < 1:2437413/150‑1 (MQ=255) ctgggAACCCGGCTGGCGCTGGATTTTTAAATCG‑TTATTTGAAGCGCCGGATGCAC‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCctc < 1:6275270/148‑1 (MQ=255) cAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCctc > 1:6646746/1‑150 (MQ=255) aGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCctct > 2:7403858/1‑150 (MQ=255) aGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCctct > 1:7442157/1‑150 (MQ=255) ggAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTc > 1:717665/1‑150 (MQ=255) taaCAGGGCTGGCGCTGTTTTTTAAAATCT‑TTATTTGACGCGCCGGAGGCAA‑CGCACCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTcc < 1:1839338/149‑1 (MQ=255) gAACACGGCTGGCGCTGGATATTTAAATCG‑TCATTGGACGCGCCGGATGCCA‑CGCAACCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTcc < 2:475048/150‑1 (MQ=255) acacGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGACGCGCCGGATGAAC‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCg < 2:7682217/150‑1 (MQ=255) cgcTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAAcgc > 1:4269149/1‑150 (MQ=255) gcTGGATTTTTAAATCG‑TTATTTGAAGCGCCGTATGAAA‑CGAATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAAcgcg < 2:6162925/150‑1 (MQ=255) ggtttttttAAATTGTTTTTTTCACGCGCGGGATGCAA‑CGCCCCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGt < 2:2856149/144‑1 (MQ=255) gagaTTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGac > 2:2311153/1‑150 (MQ=255) agaATTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGaca > 2:5092723/1‑150 (MQ=255) tAAATCG‑TTTTTTGACGCGCCGTATGAAA‑CGCAACCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATa < 1:5960094/150‑1 (MQ=255) aTCG‑TTATTTGAAGCGCCGGATTCAA‑CGCAAACCGCACGGCGCGTTAATAAAAAAAAAAGGCGGGAGAAATTCCCAAAAGCGTTGCCAATTTTTTAGCGTGTTGCAGCGTTAAATTACTCTTACCCCACAAAAACCCTGACACCAAAGAt > 1:3061223/1‑150 (MQ=255) g‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTGCTCTTCCCGCTCAAAACGCGTGTCACCATAGATTTa > 2:2955707/1‑150 (MQ=255) ttATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTAc > 2:7280824/1‑150 (MQ=255) ttATTTGAAGCGCCAGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTAc > 2:1742147/1‑150 (MQ=255) aTTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTg < 1:2834085/150‑1 (MQ=255) ttGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGcc > 2:1346960/1‑150 (MQ=255) gacgcgcCGTATGCAA‑CGCACCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCaa < 1:3100549/147‑1 (MQ=255) gacgcgcCGGATGCAA‑CGAATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCaa < 1:3504010/147‑1 (MQ=255) acgtgcCGGATGCGT‑TGCATCCGGCGCGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTACCGCGCAAAACGCGTGACACCATATATTTACAGCCAAt > 2:2129780/5‑150 (MQ=255) gcgcCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAAttt > 1:331896/1‑150 (MQ=255) gcCGGATGCAC‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTcc < 1:4355635/150‑1 (MQ=255) ccGGATGCGT‑TGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCg > 2:4840919/1‑150 (MQ=255) ccGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCg > 2:753928/1‑150 (MQ=255) cGGATGCAC‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCgg < 1:6498371/150‑1 (MQ=255) cGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCgg < 2:3436333/150‑1 (MQ=255) cGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCgg > 1:481568/1‑150 (MQ=255) gATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGc < 2:5268931/79‑1 (MQ=255) gATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGc > 1:5268931/1‑79 (MQ=255) aTGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAg > 1:1652305/1‑150 (MQ=255) gCAC‑CGCAGCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGAt < 2:3588735/150‑1 (MQ=255) gCAA‑CGCATCCGGCACGTCGCGTTAATCAAAAAACAAGGCGGGAGAAAAGCCGAATCGCGTAGCCAATTTTATAGCGAGTTCCAGCGTAAATTTCCTCTTAACGCTCAAAACTCGTGACACCATATATATACTGCCAATATCAGGCAGaa > 1:486478/1‑149 (MQ=255) gCAA‑CCCACCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGAt < 1:2311566/150‑1 (MQ=255) cAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATc > 1:5352565/1‑150 (MQ=255) cAA‑CGCATCCGCCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATc < 2:5985438/150‑1 (MQ=255) aa‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATCg > 1:5108487/1‑150 (MQ=255) aa‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATCg > 1:392920/1‑150 (MQ=255) a‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATCgg > 1:3770229/1‑150 (MQ=255) | GCTGGCGCAACCGCTGATTGATAGCGGGAAAACGGTGCATTTAATTGGCGGCTGCGATGTGGCTATGGAGCTGGACGCACGACGGGCAATTG‑CCCAGGGAACACGGCTGGCGCTGGAGATTTAAATCG‑TTATTTGAAGCGCCGGATGCAA‑CGCATCCGGCACGTCGCGTTAATCAATAAACAAGGCGGGAGAAATGCCGAATCGCGTTGCCAATTTTTTAGCGTGTTCCAGCGTTAATTTCCTCTTCCCGCTCAAAACGCGTGACACCATAGATTTACTGCCAATTTCCGGCAGATCGG > NC_000913/3233560‑3233858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |