| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,067 | T→G | 11.2% | intergenic (+50/‑148) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,067 | 0 | T | G | 11.2% | 1031.2 / 24.9 | 363 | intergenic (+50/‑148) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base T (131/178); new base G (49/2); total (183/180) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.52e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 368 total aligned reads displayed.
AAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAT > NC_000913/3780919‑3781216 | aaaTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCTTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGtt < 1:3500860/150‑1 (MQ=255)aaaTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGGAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGtt < 2:5625945/150‑1 (MQ=255) aTCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAACCCCCTCCCTCAGGGAGAGGGG‑ACCGTTCg > 1:5487961/1‑150 (MQ=255) tCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCgg < 2:3928897/150‑1 (MQ=255) cGATCAGCGAAAGGACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAACGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGgc < 2:5838577/150‑1 (MQ=255) gATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCGCACCCGAACCCACACCCACAGGGAGAGGGG‑ACCGTTCGgcg > 1:4882806/1‑150 (MQ=255) aTCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTGGCCTGCGGCACTGGCTCCCATGGCGAACGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGgcgc < 1:6409624/150‑1 (MQ=255) tCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCt < 1:5764267/150‑1 (MQ=255) tCAGCGAAAGTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGACAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCt < 2:4808929/150‑1 (MQ=255) gCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCCAAACCACAACCACCCGGGGCGGGG‑ACCCTTCGgcgcggga > 1:4982323/1‑146 (MQ=255) gCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCACACCCACACGGAGAGGGG‑ACCCTTAGGCGCtgta > 2:503492/1‑150 (MQ=255) gCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCAAAACCACAACCACAGGGGGAGGGG‑ACCCGTCGGCGCggta > 1:377705/1‑150 (MQ=255) cGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCtgtat < 1:5009979/150‑1 (MQ=255) gAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCtgtatg < 2:4705286/150‑1 (MQ=255) aaTTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCtgtatgta < 1:8232218/150‑1 (MQ=255) ttACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACt < 2:4369157/150‑1 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCt < 2:448434/150‑1 (MQ=255) gCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCGAACCCACTCCCACCGGGGGAGGGG‑ACCGTTCGGCGCTGTATGTACTacca > 1:8351162/1‑149 (MQ=255) gCAAGATTCGCTGGTGAAGGGGCTGGTTAAAGAGTTGCCTGAGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTGACCCGCTCCCTCCGGGGGGGGGG‑GCCGGGCGGGGCTGGATGGGCTCCCt > 2:553686/1‑150 (MQ=255) cAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCACAACCAAACCCAAAACCACAGGGAGGGGGG‑ACCCTTCGGCGCGGGTTGTAcaaccgc > 2:574949/1‑144 (MQ=255) aaGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCCCCCGAAACCACACCCTCCCGGGGTGGGG‑ACCCTTCGGCGCGGGATGTACTCCcaca > 2:524379/1‑150 (MQ=255) aGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCAc < 1:2632909/150‑1 (MQ=255) gATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCAct < 2:6981717/150‑1 (MQ=255) aTTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCActc < 2:2842981/150‑1 (MQ=255) ttCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAACCCACACCCACAGGGGGAGGGG‑GCCCGGCGGCGCGGGAGGTACACCCacacaca > 1:150935/1‑147 (MQ=255) gCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaa < 2:165306/150‑1 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 1:2346293/150‑1 (MQ=255) cTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGaaa < 2:6294815/150‑1 (MQ=255) tGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAAc < 1:5823291/150‑1 (MQ=255) gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGa < 1:5325376/150‑1 (MQ=255) gTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACACCCAAACCCACTCCCACAGGGAGAGGGG‑CCCGGTCGGCGCTGTATGTACACCCGCACACTGAAACGa > 1:5141586/1‑150 (MQ=255) gCAGGGGCTGGTTAAAGTGTTGCCTGCGGCACTGGCTCCCATGGCTAATGGGATTGCGGCTTTGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGTGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGaca < 1:560516/150‑1 (MQ=255) ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCa < 2:7913608/150‑1 (MQ=255) ggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtt < 2:1532510/150‑1 (MQ=255) ggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAAACCACTCCCTCAGGGTGTGGGG‑ACCGGTAGGGGGGGTTTGTACTGCCTCACTCTGAAACCACACCGcccaatt > 2:5087825/1‑144 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTGGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtttt < 1:1023524/150‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtttt < 1:5410831/150‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCAAACCCCCACCCTCAGGGGGTGGGG‑GCCCTTCGGCGCAGTATGTACTCCCACAAACTGAAACGACACCGCAccgagtt > 2:7724049/1‑144 (MQ=255) agagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttttttt < 1:5936569/150‑1 (MQ=255) agagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAAACCAAACCCAAAGGGAGGGGGG‑GCCGGTCGGCGCTGTATGGACAACCAAACAAAGAAACGACACCCCCCACttttttt > 2:536338/1‑150 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTcc < 1:4334751/150‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCGCTCCCACAGGGCGAGGGG‑CCCCGTCGGCGCTGTTTGTTATACCGCACTCTGAAAAGACACCGCACGCTTTTTTTCTcccgc > 2:1285935/1‑148 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCGCACCCGAACCCACTCCCGCCGGGAGGGGGG‑ACCCTTCGGCGCGGTATTTACTCCCACACACTGGAACCACACCCCCCACattttttaaaccac > 2:652714/1‑143 (MQ=255) cTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCg < 2:4095132/150‑1 (MQ=255) tGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCACAACCAATCACACTCCCACCGGGGGCGGGG‑CCCCGTAGGCGCGGTTTGTTCGCCCACACACTGGAAAGACACCCCACACTTTTTTTATACCgcgc > 2:2661099/1‑150 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCg < 1:971786/150‑1 (MQ=255) gggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCgg < 1:931522/149‑1 (MQ=255) ggCTCCCCTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 2:5000103/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 2:2589172/150‑1 (MQ=255) ggCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 2:8355534/150‑1 (MQ=255) ggCGCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 2:5450981/150‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTTCCCCCCCACACCCAAACCCAAAACCACAGGGAGGGGGG‑GCCCTTCCGCGCTGTATTTACTCCCACACACTGAAAACACAACCCACACTTTTTTTAACCCACGCCCCACCcggg > 2:2794773/1‑150 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga < 2:14059/150‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCACACCCAAAACCGCACCCACAGGGGGTGGGG‑GCCCTTCGGCGCTGTATTTACTCCCACACACAGAAACGACACCGCACACTTTTTTTATCCCGCGCCCCACCCGGGcgag > 2:1962885/1‑150 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag < 1:6774600/150‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTGTGCGCCCCCCCACCCAAAACCACAACCACACGGGGGGGGG‑GCCCGTAGGCGCGGTATGTTAACCCACACACAGAAAACAAACCCCCCAATTTTTTTTTACCCCCCCCCACCCGGGtgag > 2:3757072/1‑150 (MQ=255) ctGGCGAAAGGGAATGCGGCATAGTCGTTGGCGCCCCCTCACCCTCCCCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg < 1:6684003/149‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCACACCCGAACCCAAAACCCAACGGTGTGGGG‑AACCGTCGGCGCAGGTTGTAACACCGCACGCAGAAACCACACCGCCAACATTTTTTATCCCGCCCCCCGCCCGGGCGgggg > 2:1083766/1‑150 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAggg < 2:2053929/150‑1 (MQ=255) ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGcc < 2:4284974/150‑1 (MQ=255) gCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCCCACCCGAAACCACACCCAAAGGGCGGGGGGCACCG‑TAGGGGCGGTTTTGAAACCCGCACAATGTAACCACACCCCACACATTTTTTTTACCCCGCCCCCCCCGGGGGGGGGGCg > 2:2548070/1‑150 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:1258372/150‑1 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGTGCCCCCGCACCCGAAACCACTACCTCAGGGAGAGGGG‑ACCGTTCGGCGCAGTATTTACTCCCACAAACAGAAACGACAACGCACACATTTTTTATACCTCGCCCCTCCGGGGAGAGGGCCggg > 2:8255165/1‑150 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 2:4641815/150‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCCCTCCCCCAGGGAGTGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 2:2947902/150‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 1:6233396/150‑1 (MQ=255) ggAATGCGGCATAGTCGTTTTCCCCCCCGCACCCTAACCCACTCCCACAGGGCGATGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACCACACCGCACACTTTTTTTCTCCCACGCCCCACCGGGGTGAGGGCCggggggtg > 2:6275077/1‑146 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:3419747/150‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:317388/150‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:6650677/150‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCGCCCTCGCCCCTCCGGGGAGATGGCCGGGGTGAgg < 1:4229927/150‑1 (MQ=255) caTGCGGCCGAGTCGTGTGCGCCCCCGCCCCCGACCCCTCGCCCTCCGGGAGAGGGG‑ACCGTGCGGCGCTGTATGTACTCCCGCCCTCTGAAACGACCCCGCACTCTTTTTTTCGCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg < 2:6819514/149‑1 (MQ=255) ggCATTGTCGTTGGCGCCCCCTCACCCTACCCCTCTCCCTCCGGGAGCGGGG‑ACCGGTCGGGGCTGTTTGTACTCCCTCACTCTGAACCGACACCGCACTCTTTTTTTCCCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGCGGGGaaaa < 1:216950/150‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCACACCCGAAACCAAAACCTCCCGGAGAGGGG‑ACCCGTCGGCGCGGTATTTACTACCCCACACAGAAACGACACCCCACGCTTTTTTTATGCCAAGCCCCACCCGGGAGAGGGCCGGGGGGAGGGGgaaa > 2:5323816/1‑150 (MQ=255) tCGTTTGCGCCCCCTCAACCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACACTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCa > 2:3545304/1‑150 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAc > 2:6543196/1‑150 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAc > 2:7475368/1‑150 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtt > 1:2763448/1‑150 (MQ=255) tCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAttt > 1:7042338/1‑150 (MQ=255) tCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAttt > 2:7229314/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGACAAGGCCGCACTGCTCACCAATTTTCTg > 1:3286538/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 1:5657313/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 1:80344/1‑150 (MQ=255) tccccTCTCCCTGAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTACCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTATGCTa > 1:2266740/3‑150 (MQ=255) aCCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGCACAGGCCGCACTGCTCACCCAGGTTCTGCTAt > 2:7555700/1‑150 (MQ=255) cccTCTCCCTGAGGGAGAGGGT‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 1:3109319/1‑150 (MQ=255) cccTCTCCCTGAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 1:7736350/1‑150 (MQ=255) ccTCTCCCTGAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc > 1:7711751/1‑150 (MQ=255) ccTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc > 1:39773/1‑150 (MQ=255) ctctCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 2:60562/1‑150 (MQ=255) tctcCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTg > 1:4573425/1‑150 (MQ=255) ccTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc > 1:1666160/1‑150 (MQ=255) cTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc > 1:66480/1‑150 (MQ=255) cTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGccccc > 1:8284293/1‑150 (MQ=255) cTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACA‑CACACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCg > 1:7329123/1‑150 (MQ=255) tCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCg > 2:213895/1‑150 (MQ=255) gagaGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa > 2:8081761/1‑150 (MQ=255) gggg‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATGTTCTGCTATCCTGCCCCCGCACTAAggg > 2:5216443/1‑150 (MQ=255) ggg‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 2:643621/1‑150 (MQ=255) ggg‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 1:1980508/1‑150 (MQ=255) | AAATCGATCAGCGAAATTACGCAAGATTCGCTGGTGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGG‑ACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAT > NC_000913/3780919‑3781216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |