| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,270,723 | T→G | 5.2% | intergenic (+263/+26) | rdlC → / ← chaA | sRNA antisense regulator affects LdrC translation; proposed addiction module in LDR‑C repeat, with toxic peptide LdrC/calcium/sodium:proton antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,270,723 | 0 | T | G | 5.2% | 385.3 / 7.1 | 123 | intergenic (+263/+26) | rdlC/chaA | sRNA antisense regulator affects LdrC translation; proposed addiction module in LDR‑C repeat, with toxic peptide LdrC/calcium/sodium:proton antiporter |
| Reads supporting (aligned to +/- strand): ref base T (51/65); new base G (4/3); total (55/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 126 total aligned reads displayed.
TTTGCAATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATCACCAC > NC_000913/1270575‑1270871 | tttGCAATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGGAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGAtt > 1:312277/1‑149 (MQ=255)tttGCAATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGAtt > 1:879637/1‑149 (MQ=255) ttGCAATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTa < 1:439714/149‑1 (MQ=255) gCAATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTAcc < 1:184337/149‑1 (MQ=255) gCAATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTAca > 1:698547/1‑148 (MQ=255) cAATGAAGAGTACATTCCTGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCg < 1:720456/149‑1 (MQ=255) cAATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGGATTTATATTATCT‑CCCCCGATTACCg > 1:878708/1‑149 (MQ=255) aTGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGGGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTc < 2:733965/149‑1 (MQ=255) tGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCa > 2:1266031/1‑149 (MQ=255) gAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTTGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCAt < 2:729677/149‑1 (MQ=255) gAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCAt < 2:1161378/149‑1 (MQ=255) agagTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCg < 2:595731/149‑1 (MQ=255) gagTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCTCCGATGACGGTAATCgg > 2:264416/1‑149 (MQ=255) agTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCgga < 2:40230/149‑1 (MQ=255) aCATTCCGGCTTTTCATCAGCGGTTGCAGTGGTTTCTTGCAGGGTGTTGTTGTGTCTAGCTATTCTGATTATCGACCTGTACAGGTATTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCggagga < 2:427988/149‑1 (MQ=255) aCATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCTCCGATGACGGTAATCggggga < 2:1452686/149‑1 (MQ=255) aTTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGgaga > 1:790554/1‑149 (MQ=255) aTTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGgaga < 1:539952/149‑1 (MQ=255) aTTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGgaga > 1:1476389/1‑149 (MQ=255) ttCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGat > 1:946293/1‑149 (MQ=255) tCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGata < 1:225516/149‑1 (MQ=255) ggCTTTTCAACAGCTGTTGCAGTGGTTTCGTTCATGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCATGTAGTATGAAGAAATACAATAAGAAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATaa < 2:1352182/149‑1 (MQ=255) ggCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCTCCGATGACGGTAATCGGGGGAGataata < 1:264416/149‑4 (MQ=39) ggCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATaa < 1:510758/149‑1 (MQ=255) ttttCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATAGGAGGAGATATAACTg > 1:1516317/1‑149 (MQ=255) ttGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATc > 2:577272/1‑149 (MQ=255) gCAGTGGTTTCGTGCAGGGTGTTGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGt < 1:1474271/149‑1 (MQ=255) gCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGt < 2:1060056/149‑1 (MQ=255) gCAGTGGGTTCGTGCAGGGTGTGGGACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGt < 2:888926/149‑1 (MQ=255) cAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGtc > 1:1277003/1‑149 (MQ=255) tGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGtcatc < 2:12412/149‑1 (MQ=255) gTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCaa > 2:839773/1‑149 (MQ=255) tttCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGACATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCaaa > 1:394246/1‑149 (MQ=255) gTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAgg > 1:1087038/1‑149 (MQ=255) ttcAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAggc < 1:1524002/147‑1 (MQ=255) tGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAggc > 2:476775/1‑149 (MQ=255) tgtgGTACAGGCTCGAAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CACCCGATTACCGTCATCGGAGGAGAGATAACTGTCAGGCAAATATCGTCATCAAAGAGGCGGCAAAc > 1:264891/1‑149 (MQ=255) gtgGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACa > 1:1120820/1‑149 (MQ=255) tACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGc < 2:790554/149‑1 (MQ=255) tACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGc < 2:1277003/149‑1 (MQ=255) aCAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGcc > 2:176424/1‑149 (MQ=255) cAGGCTCTCAATTCTGATTAACGACCTCTCCAGGTTGTATGAAGTAATACAATACGCAGGAATTTATATAATCT‑CCCCCTATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGTCAAACAGTGCCa < 2:1160194/149‑1 (MQ=255) gCTCTCAATTCTGAATAACGACCTGTCCATGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGAt < 2:1552303/149‑1 (MQ=255) cTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAGTACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGAtg > 1:1227510/1‑149 (MQ=255) cTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGAtg < 1:1043993/149‑1 (MQ=255) tCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACAGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGAtgc > 2:118197/1‑149 (MQ=255) cGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGAtgcg < 2:889283/149‑1 (MQ=255) gCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGgaggag < 1:217025/92‑1 (MQ=255) tGATTAACGACCTGTCCAGGTAGTAGGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGATGAGATATAACTGACAGGAAAATATAGTCATCAAATAGGCGGAAAACAGTTCCAGATGCGCTACGCCa > 1:224511/1‑149 (MQ=255) aTTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCAtt > 2:1228263/1‑149 (MQ=255) tAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGa < 1:577272/149‑1 (MQ=255) aCGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGc < 1:527022/149‑1 (MQ=255) ccTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGt < 2:545999/149‑1 (MQ=255) cTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGtt > 2:103512/1‑149 (MQ=255) tGTCCAGGTAGTATGGAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTa < 2:312277/149‑1 (MQ=255) tGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTa < 1:1316689/149‑1 (MQ=255) tGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTa < 1:413235/149‑1 (MQ=255) tGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTCCCAGATGCGCTGCGCCATTGAGCACGTTa < 1:1052123/149‑1 (MQ=255) gTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAg < 2:171862/149‑1 (MQ=255) tCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGt > 1:253700/1‑149 (MQ=255) cAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATACCTGTCAGGCAAATATAGTCATCAAATAGGCGGCAAACAGTGCCAGAAGCGCTGCGCCATTAATCACGTTAGTAc > 1:1515601/1‑149 (MQ=255) cAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTAc < 2:105950/149‑1 (MQ=255) aGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACg > 1:724420/1‑149 (MQ=255) aGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACg > 1:226855/1‑149 (MQ=255) ggTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGt > 2:342013/1‑149 (MQ=255) gtaTGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCgg < 1:1545968/149‑1 (MQ=255) gaagaaATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCTCTGCGCCATTGAGCACGTTAGTACGTCCGGTggt > 2:1436580/1‑148 (MQ=255) gaaATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGaa < 2:1476389/149‑1 (MQ=255) aaTACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAgg < 2:879637/149‑1 (MQ=255) aTACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGga > 2:719368/1‑149 (MQ=255) cAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGat < 1:1481091/149‑1 (MQ=255) aaTAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGata > 1:593630/1‑149 (MQ=255) aaTAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGata > 1:181780/1‑149 (MQ=255) aTAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGatat < 1:1148116/149‑1 (MQ=255) aTAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGatat < 1:581253/149‑1 (MQ=255) aaGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATgg < 2:1516317/149‑1 (MQ=255) gCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGt > 2:852799/1‑118 (MQ=255) gCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGca > 1:687118/1‑149 (MQ=255) aGGAATTTATATTATCTCCCCCCGATTACCGTCATAGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGcac < 2:662290/149‑1 (MQ=255) aGGAATTTATATTATCT‑CCCCCGATGACCGTCATCGGAGGAGATATAACTGTAAGGAAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTTCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGcaca > 1:329052/1‑149 (MQ=255) ggAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAg > 1:1489450/1‑149 (MQ=255) aaTTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCa < 2:475197/149‑1 (MQ=255) aTTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCAc < 2:1487551/149‑1 (MQ=255) aTTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCAc < 1:998638/149‑1 (MQ=255) tttATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACt > 2:1292114/1‑149 (MQ=255) atatTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTaaa < 1:1368102/149‑1 (MQ=255) atatTATCT‑CCCCCGATTACCGTCATCGGAGGACATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTaaa < 1:793575/149‑1 (MQ=255) ttatatCT‑CCTCCGATGACGGTAATCGGGGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAag > 1:1473706/4‑149 (MQ=39) ttatatCT‑CCTCCGATGACGGTAATCGGGGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAag > 2:794205/4‑149 (MQ=39) tattatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAag < 1:1209439/149‑1 (MQ=255) attatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAaga < 1:476775/149‑1 (MQ=255) ttatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAagag < 2:698547/149‑1 (MQ=255) ttatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAagag < 2:1227510/149‑1 (MQ=255) ttatCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGCCACAGCACTAAagag > 1:1096464/1‑149 (MQ=255) ttatCT‑CCCCCGATTACCGACATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAagag < 2:394246/149‑1 (MQ=255) atCT‑CCTCCGATGACGGTAATCGGGGGAGATATAACTGTCAGGCAAATATCTTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGc < 1:794205/149‑1 (MQ=255) atCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGc < 1:1282077/149‑1 (MQ=255) cccGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGTGCTGCGCAATTGATCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCAACAAt > 1:36897/1‑149 (MQ=255) cGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATca > 1:922455/1‑149 (MQ=255) tACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATcaccac < 2:1087038/149‑1 (MQ=255) | TTTGCAATGAAGAGTACATTCCGGCTTTTCAACAGCTGTTGCAGTGGTTTCGTGCAGGGTGTGGTACAGGCTCGCAATTCTGATTAACGACCTGTCCAGGTAGTATGAAGAAATACAATAAGCAGGAATTTATATTATCT‑CCCCCGATTACCGTCATCGGAGGAGATATAACTGTCAGGCAAATATCGTCATCAAATAGGCGGCAAACAGTGCCAGATGCGCTGCGCCATTGAGCACGTTAGTACGTCCGGTGGAGAAGGAGATATGGCACAGCACTAAAGAGGCCACCATCACCAC > NC_000913/1270575‑1270871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |