| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,419,910 | A→T | 5.0% | L111Q (CTG→CAG) | racR ← | Rac prophage; putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,419,910 | 0 | A | T | 5.0% | 346.9 / 4.6 | 110 | L111Q (CTG→CAG) | racR | Rac prophage; putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (61/43); new base T (2/4); total (63/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 113 total aligned reads displayed.
AGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGACCAACAACATCAGAAAA > NC_000913/1419762‑1420058 | agtttaagttCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGCTACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACa < 2:1234274/149‑1 (MQ=255)agtttaagttCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTTGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACa < 1:325454/149‑1 (MQ=255) tttaagttCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAgg > 1:724614/1‑149 (MQ=255) tttaagttCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAgg > 2:318364/1‑149 (MQ=255) taagttCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGC‑TTTCCTGTTATCTGGaaa < 1:1095097/149‑1 (MQ=255) aagttCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGaaa < 1:134632/149‑1 (MQ=255) tCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTa < 1:262590/149‑1 (MQ=255) tCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTa < 2:1586017/149‑1 (MQ=255) tCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGC‑TTTCCTGTTATCTGGaaatgcta < 2:1484732/149‑6 (MQ=255) tttttGTGATGTTCTGGCTTTTCCGTTCATATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGC‑TTTCCTGTTATCTGGAAATGCTACagaa < 2:1383026/149‑4 (MQ=255) tttttGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATc > 1:1063094/1‑149 (MQ=255) gtgATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGctct < 2:1457223/149‑1 (MQ=255) tgATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCtt > 1:1549673/1‑149 (MQ=255) aTGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTAt > 2:1084675/1‑149 (MQ=255) tGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTAtt > 1:213457/1‑149 (MQ=255) gTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTAttt < 2:1141677/149‑1 (MQ=255) ttCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTAttta > 1:791043/1‑148 (MQ=255) ttCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTtc > 1:638531/1‑149 (MQ=255) gtGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACATTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGTAAA‑GCTACAATCGCTCTTATTtcat < 2:979982/148‑1 (MQ=255) cTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTtcat < 1:1457627/149‑1 (MQ=255) tGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTtcatc > 2:946780/1‑149 (MQ=255) ggCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTtcatca < 2:447874/149‑1 (MQ=255) ggCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTtcatca < 2:548895/149‑1 (MQ=255) ggCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGAGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTtcatca < 2:1462571/149‑1 (MQ=255) ttCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGgc > 1:915754/1‑149 (MQ=255) tCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGgct > 1:107333/1‑149 (MQ=255) ccGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGgctg < 1:1069976/149‑1 (MQ=255) cGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGgctgc < 2:571070/149‑1 (MQ=255) gTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGgctgct < 2:611717/149‑1 (MQ=255) gTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGgctgct < 1:1127027/149‑1 (MQ=255) gTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGgctgct > 1:1120345/1‑149 (MQ=255) taTTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATa < 2:262757/148‑1 (MQ=255) gATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATa > 1:171802/1‑149 (MQ=255) ttgaaGAGCTTTCAGATAATTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTACAGATAACTGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATaaa < 2:986443/146‑1 (MQ=255) ttCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAAGCTGCTTGATaaa > 2:964278/1‑149 (MQ=255) tCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTTTGTATGCGAGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAg < 2:1156297/149‑1 (MQ=255) tCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAg < 1:523218/149‑1 (MQ=255) aaGAGCTTTCAGATACTTACCCCCTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCGTCAGAGGCTGCTTGATAAAGgt > 1:94405/1‑149 (MQ=255) aaGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGgt > 1:325963/1‑149 (MQ=255) agagCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGgtt < 1:1559106/149‑1 (MQ=255) agagCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGgtt > 1:1264996/1‑149 (MQ=255) gCTTTCAGATACTTACCCACTTTCATTTCCATCGCGGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGgttgtt < 2:81365/149‑1 (MQ=255) ttACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAg > 1:507356/1‑149 (MQ=255) cccACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGtta > 2:1563154/1‑148 (MQ=255) cccACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTc > 2:697173/1‑149 (MQ=255) cccACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCACTTATTTCATCAGAGGCTGCTTGATAAAGGTTCTTTATATCTAAAAGTTc > 2:364957/1‑149 (MQ=255) ccACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCa > 1:1181424/1‑149 (MQ=255) ccACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCa > 1:1286848/1‑149 (MQ=255) tttCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACttt > 1:463677/1‑149 (MQ=255) tttCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACttt > 2:1557048/1‑149 (MQ=255) ttCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACtttt < 2:1120345/149‑1 (MQ=255) ttCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACtttt < 2:1381302/149‑1 (MQ=255) aTTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGt > 1:33592/1‑149 (MQ=255) tttCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTa < 1:673040/149‑1 (MQ=255) tttCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTAATAAGAGGATGGTTGATAAAGGTTTTTTATATCTAAAATTAAAATTTTTgaa > 2:800776/1‑147 (MQ=255) aTCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGa > 1:1321584/1‑149 (MQ=255) tCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCAGTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATATAGGTTGTTTATATCTTAAAGTTCTCTTTTTGTAGCTGaa > 2:329831/1‑149 (MQ=255) tCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGATCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGaa > 2:847792/1‑149 (MQ=255) ctgctATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATtg > 1:1105142/1‑149 (MQ=255) ctATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATtggtg < 2:490886/149‑1 (MQ=255) aTGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTggg < 2:724614/149‑1 (MQ=255) tGTAGGCTCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTgggg < 1:426064/149‑1 (MQ=255) aGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGtt < 2:1063094/149‑1 (MQ=255) ggCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTg < 1:176012/149‑1 (MQ=255) ggCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTg < 2:325963/149‑1 (MQ=255) gcgcGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCGCTTATTTCATCAGAGGCTGCTTGATTAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTgg > 1:81628/1‑149 (MQ=255) cgcgAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGt > 1:1544908/1‑149 (MQ=255) gcgAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTa > 2:914638/1‑149 (MQ=255) gAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATg > 2:1263515/1‑149 (MQ=255) aaCATCGTGGTCAACCCAATCTGGTTCTGTTGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGGTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATgg > 2:1498536/1‑149 (MQ=255) aCATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGGGCTTATTTCATCAGAGGGTGCTTGATAAAGGTTGTTTATCTCTAATAGTTGACTTTTTGTATCTGAATTGCTGGTGGTTGGTATtgg > 1:247515/1‑149 (MQ=255) aCATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATggg < 1:849453/149‑1 (MQ=255) aCATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATggg < 2:1567705/149‑1 (MQ=255) tCGTGGTCAACCCAATCTGGTTCTTTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTTGTGGGGGTTGGTATgtgata > 2:1075202/1‑144 (MQ=255) tCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTa > 1:1437953/1‑149 (MQ=255) tCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTa > 2:1273864/1‑149 (MQ=255) tGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGTTGGGGGTTGGTATGGGGTATTc > 1:1362561/1‑149 (MQ=255) cAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCTGAGGCGGCTTGATAATGGTTGTTTATATCTAAAAGTTAACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTa < 1:219312/149‑1 (MQ=255) aaCCCAATGTGGTTCTGTAGCATTTCCATTTAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTTATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTaa < 1:566533/149‑1 (MQ=255) aCCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTAATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCAATTTTAGTATCAGAATTGGTGGTGGTTGGTATGGGGTATTCGTTAAg > 1:1308433/1‑149 (MQ=255) aTCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGGGGGGGTTGGTATGGGGTATTCGTTAAGccccc < 2:213457/149‑1 (MQ=255) tGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAAt > 1:1320426/1‑149 (MQ=255) tGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAAt > 1:604918/1‑149 (MQ=255) attGTAGC‑TTTCCTGTTATCTGGAAATGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTAACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGcta > 1:474991/3‑148 (MQ=255) cTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGAATCTGAATTGGTGGGGGTTGGTATGGGGTATTAGTTAAGCCCACAATGctct > 1:308507/1‑149 (MQ=255) tGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTg > 2:826429/1‑149 (MQ=255) tGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTg > 2:106862/1‑149 (MQ=255) tGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTg < 2:1549673/149‑1 (MQ=255) gTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCAGTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTgg > 2:6637/1‑149 (MQ=255) gTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTgg > 1:1425014/1‑149 (MQ=255) gTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTgg > 1:770293/1‑149 (MQ=255) tAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGa > 2:1352783/1‑149 (MQ=255) aGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATAAGAGGCTGCTTGATAAAGGGTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGAc < 1:1250295/149‑1 (MQ=255) agctttCCTGTTATCTGGAAATGCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGAc > 2:1313536/4‑149 (MQ=255) aTTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGACcaa > 1:222974/1‑149 (MQ=255) tCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGACcaacaa < 2:959032/149‑1 (MQ=255) cAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCAAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGACCAacaaca < 2:915754/149‑1 (MQ=255) aGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTAACTTTTTGTATCTGAATTGTTGGTGGTTGGTATGGGGTATTCGTTAAGCACACAATGCTCTGGCCCAACAACAt > 2:1437431/1‑149 (MQ=255) aaCAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCCCTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGACAAACAACATCaga > 2:1452603/1‑149 (MQ=255) aGGAAA‑TCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGACCAACAACATCagaaaa < 1:318364/149‑1 (MQ=255) | AGTTTAAGTTCCAGTTTTTGTGATGTTCTGGCTTTTCCGTTCAGATTCAAGAGCTTTCAGATACTTACCCACTTTCATTTCCATCGCTGCTATGTAGGCGCGAACATCGTGGTCAACCCAATCTGGTTCTGTAGCATTTCCAGATAACAGGAAA‑GCTACAATCGCTCTTATTTCATCAGAGGCTGCTTGATAAAGGTTGTTTATATCTAAAAGTTCACTTTTTGTATCTGAATTGGTGGGGGTTGGTATGGGGTATTCGTTAAGCCCCCAATGCTCTGGACCAACAACATCAGAAAA > NC_000913/1419762‑1420058 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |