| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,129,907 | T→A | 5.6% | I324I (ATA→ATT) | wcaD ← | putative colanic acid polymerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,129,907 | 0 | T | A | 5.6% | 347.0 / 7.4 | 118 | I324I (ATA→ATT) | wcaD | putative colanic acid polymerase |
| Reads supporting (aligned to +/- strand): ref base T (48/62); new base A (3/4); total (52/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.40e-01 | |||||||||||
Only 100 of 120 total aligned reads displayed.
CGGAGTAAAAAGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATC > NC_000913/2129760‑2130055 | cGGAGTAAAAAGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATTC‑AAAACATTGTCTa > 2:1327272/1‑149 (MQ=255) ggAGTAAAAAGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTAt < 2:1219034/149‑1 (MQ=255) gAGTAAAAAGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATg > 2:369452/1‑149 (MQ=255) gAGTAAAAAGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATg < 1:1379917/149‑1 (MQ=255) aGTAAAAAGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATgg < 1:141461/149‑1 (MQ=255) gTAAAAAGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGt < 2:1512861/149‑1 (MQ=255) aaaaGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGtttt > 2:449494/1‑149 (MQ=255) aaaaGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGtttt > 1:226393/1‑149 (MQ=255) aGATATAATTGCACGCGAAAATTGCCGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACGGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATAGACAATGGtttgtat < 2:1441697/149‑5 (MQ=255) gATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCg > 1:1038835/1‑149 (MQ=255) gATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACATACCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCCGATAC‑AAACCATAGTCAATGGtttgtatc < 1:1036876/149‑6 (MQ=255) atatAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATAGACAATGGtttgtatct < 2:751870/149‑7 (MQ=255) ataATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AATCCATTGTCTATGGTTTTTCCGACa > 1:318622/1‑149 (MQ=255) ataATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACa > 1:1263708/1‑149 (MQ=255) taATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACAt < 2:1210957/149‑1 (MQ=255) aaTTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATc > 1:1068522/1‑149 (MQ=255) tcACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTACCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCTTTGTCTATGGTTTTTCCGACATCCGCa < 1:1364307/148‑1 (MQ=255) gcgAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGt > 1:123869/1‑149 (MQ=255) gCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTc < 1:766620/149‑1 (MQ=255) gCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTc < 2:1051355/149‑1 (MQ=255) cGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTcc < 1:1339126/149‑1 (MQ=255) cACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGATTTTCCGACATCCGCACCGTTAAATATTCCGAatgat < 2:1369701/149‑1 (MQ=255) cACCAAAAGCGTTGATCATCATTTTTATCACATTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAatgat < 1:1551615/149‑1 (MQ=255) aCCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGAGATAAAAACACCGCGAACCAGGAAAAATAAATAATAAGCAGATAC‑AAAAAATTATCTATCGATATTCCGACATCCGCACCGTTAAATATTCCGAatcatg > 2:63512/1‑149 (MQ=255) ccAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGc < 1:1188810/149‑1 (MQ=255) cAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCg < 2:1027836/149‑1 (MQ=255) cAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCg > 1:223018/1‑149 (MQ=255) aaaaGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGa < 1:369452/149‑1 (MQ=255) tcGTTGATCATAATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAATAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACata < 1:470931/148‑1 (MQ=255) gTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAatat > 2:916880/1‑129 (MQ=255) gTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATAtt > 2:1104801/1‑149 (MQ=255) gTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATAtt < 2:1123155/149‑1 (MQ=255) ttGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTc < 1:449494/149‑1 (MQ=255) atcatTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAg > 1:1188331/1‑149 (MQ=255) tcatTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGt < 1:268321/94‑1 (MQ=255) tcatTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGt > 2:268321/1‑94 (MQ=255) tcatTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCACGAAAAATAAATAATCAGCAGATAC‑AAACCATTGGCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGATTGATGCGAAATATTCATAAAGt > 2:1010078/1‑149 (MQ=255) atTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGa < 2:1038835/149‑1 (MQ=255) tttttATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATACAAAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGa < 1:1357998/149‑1 (MQ=255) tttttATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACAAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAg > 1:178308/1‑149 (MQ=255) tCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAAt > 1:195008/1‑149 (MQ=255) cACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAAta > 1:643551/1‑148 (MQ=255) cACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATc < 1:1255911/149‑1 (MQ=255) tttCACCATGTACCACAGTGATAAAAACACCTCGAACAAGGAAAAATAAAAAATCCGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGa < 2:796636/149‑1 (MQ=255) cATGTACCACATTGATAAAAACACCGAGAACCAGGAAAAATAAATAATAAGCAGATAC‑AAACCATTTTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTacac < 2:698400/149‑1 (MQ=255) cATGTACCACAGTGATAAAAACACCGCGAACCAGG‑AAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACAcc < 1:749118/149‑1 (MQ=255) cATGTACCACAGTGATAAAAACACCGCGAACCAGG‑AAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACAcc < 1:755431/149‑1 (MQ=255) gTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTATATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGt < 1:1388908/149‑1 (MQ=255) aCCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCa > 2:1409730/1‑149 (MQ=255) caGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAatat < 2:1316698/149‑1 (MQ=255) aGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATg < 2:1385845/149‑1 (MQ=255) aGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATg < 2:1391714/149‑1 (MQ=255) aGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATg < 2:318622/149‑1 (MQ=255) aGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATg > 2:617316/1‑149 (MQ=255) ttGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATTGTTTTTCAGACATCAGCACCGTTAAATATTCCTATTGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATgg < 1:162128/148‑1 (MQ=255) gTGATAAAAACACCTCTAACCAGGAAAAATAAATAATCAGCAGATAC‑ACTCCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATTTgg < 1:1388880/149‑1 (MQ=255) gTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATgg < 1:870940/149‑1 (MQ=255) gTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATgg > 1:1189072/1‑149 (MQ=255) gTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATgg < 1:1484096/149‑1 (MQ=255) gATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGt > 1:380641/1‑149 (MQ=255) gATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGt < 2:123869/149‑1 (MQ=255) aTAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATgg > 2:1344573/1‑146 (MQ=255) aTAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACAGTCAATATGGGta > 2:1418521/1‑148 (MQ=255) tAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCa > 1:862306/1‑149 (MQ=255) aaaaCACAGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATTGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCaaa < 1:1327272/149‑1 (MQ=255) aaCACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTCTCAATGGTTTTTCCGACATCCGCACCGATAAATATAACCAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGa > 1:53166/1‑149 (MQ=255) acacCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGaa < 1:1055455/149‑1 (MQ=255) cacCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAAt < 2:25938/149‑1 (MQ=255) gcgAACCAGGAAAAATAAATAATCAGCAGATAC‑AACCCATTGTCTATGGTTTTTCCGCCATACGCACCGTTAAATATTCCGATTGATGCGACATATTCATAAAGTAAGCCAAATCTGACTACACCGTAAATATGGGTCAAAGAAAAAcc > 1:147900/1‑149 (MQ=255) gAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGa < 2:479189/149‑1 (MQ=255) gAACCAGGAAAAATAAATAATAAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGa < 1:1141234/149‑1 (MQ=255) ggAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCa > 2:618746/1‑149 (MQ=255) ggAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGAACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCa > 1:39583/1‑149 (MQ=255) gAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCAc > 2:1132799/1‑149 (MQ=255) ataaataaTCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGGCAATTTGGGTCAAAGAATAACCGACCATCACCAGCg > 1:163408/1‑149 (MQ=255) ataaataaTCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCAGCACCGTTAAATATTCCGAATGATGCGACATAATCATAAAGTGAGCCAAATCTGACTACACCCTCAATATGGGTCAAAGAATAACCGACCATCACCAGCg > 1:574152/1‑149 (MQ=255) aatCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGCATAACCGCCCTTCACCAGCGGACCgc > 2:300977/1‑148 (MQ=255) aatCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGa > 1:603508/1‑149 (MQ=255) tCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACa > 2:1054032/1‑149 (MQ=255) tCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACa > 1:277518/1‑149 (MQ=255) tCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCAGAATGATGCGACATAATCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCCCCAGCGGACCGCCa > 2:960152/1‑149 (MQ=255) agATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGCACCGCCAATACg > 1:1369236/1‑149 (MQ=255) gATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACAGTCAATATCGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATActa > 2:765699/1‑147 (MQ=255) gaaaaaCCATAGACAATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGata > 2:1319897/4‑149 (MQ=255) gaaaaaCCATAGACAATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGata > 2:422333/4‑149 (MQ=255) aC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGataa > 2:545089/1‑149 (MQ=255) aaaCCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACAATCACCAGCGGACCGACAATACGataata > 1:94820/1‑149 (MQ=255) aaaCAATTTTCTATGGTTTTTCCGACATCCGAACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGATCCAAATCTGACTACACCGTCAATATGTGGCATAGAATAACCGACCATCACCAGCGGACCGACAATACGataata < 1:63512/149‑1 (MQ=255) aaCCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGCCCATCACCATCGGACCGACAATACGATAatat > 2:1003287/1‑149 (MQ=255) aCCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTGATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAatatt > 2:1077401/1‑148 (MQ=255) aCCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATatg < 2:178308/149‑1 (MQ=255) aCCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGGCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATatg < 2:1573568/149‑1 (MQ=255) aTTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACTCCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATatgatg < 2:1049833/149‑1 (MQ=255) tGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGTCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGAc < 2:380011/149‑1 (MQ=255) tGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGAc < 2:195008/149‑1 (MQ=255) tGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGAc < 1:1355504/149‑1 (MQ=255) tCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGa < 2:126411/149‑1 (MQ=255) tCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGa < 2:245981/149‑1 (MQ=255) tCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGa > 1:1071738/1‑149 (MQ=255) tATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCATCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATc > 1:1268501/1‑149 (MQ=255) | CGGAGTAAAAAGATATAATTGCACGCGAAAATTGCGGTTATCACCAAAAGCGTTGATCATCATTTTTATCACTTTCCCCATGTACCACAGTGATAAAAACACCGCGAACCAGGAAAAATAAATAATCAGCAGATAC‑AAACCATTGTCTATGGTTTTTCCGACATCCGCACCGTTAAATATTCCGAATGATGCGACATATTCATAAAGTGAGCCAAATCTGACTACACCGTCAATATGGGTCAAAGAATAACCGACCATCACCAGCGGACCGACAATACGATAATATGATGACGATC > NC_000913/2129760‑2130055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |