| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,147,351 | T→A | 5.5% | S64C (AGT→TGT) | alkA ← | 3‑methyl‑adenine DNA glycosylase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,147,351 | 0 | T | A | 5.5% | 261.6 / 3.3 | 87 | S64C (AGT→TGT) | alkA | 3‑methyl‑adenine DNA glycosylase II |
| Reads supporting (aligned to +/- strand): ref base T (44/38); new base A (2/3); total (46/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
AACACAGCCGGGTAAACGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGAAATCCCAAC > NC_000913/2147208‑2147496 | aaCACAGCCGGGTAAACGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAAt < 2:33414/149‑1 (MQ=255)aaCACAGCCGGGTAAACGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGAAGA‑TCAAACAGGCGGCTCA‑TTTTCGCAAGAAACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAAt > 2:1491180/1‑149 (MQ=255) acacAGCCGGGTAAACGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAAtt > 1:1347989/1‑149 (MQ=255) acaGCCGGGTAAACGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTa < 2:1164647/149‑1 (MQ=255) caGCCGGGTAAACGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTAt < 1:1326846/149‑1 (MQ=255) gggTAAACGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCACCGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCa > 2:412573/1‑149 (MQ=255) ggTAAACGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACATAAATTTAAGTGCag < 2:313134/149‑1 (MQ=255) aaCGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTa > 1:1034927/1‑149 (MQ=255) gCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATgg < 1:1021951/149‑1 (MQ=255) tCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCCACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCggg > 2:1041868/1‑149 (MQ=255) tCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCggg > 2:186888/1‑149 (MQ=255) tCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCggg < 2:323868/149‑1 (MQ=255) cGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCt > 2:544579/1‑149 (MQ=255) gggCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGGTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGGTCTAAACCGGCACTTAAATTAATCTGCTGACTATGGCGGGCta > 1:426796/1‑149 (MQ=255) gccgcgccgcGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGATACATAGCAGA‑TCCAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAGCCTGCACTGAAATTTATGTGCAGAGTATGGCTGGCtata > 1:82458/1‑149 (MQ=255) ccgcgccgcgCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTatat < 1:465679/149‑1 (MQ=255) ccgcgccgcgCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCCGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTatat < 2:105752/149‑1 (MQ=255) ccgcgccTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGCCTCTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGa > 1:819623/1‑149 (MQ=255) ggggccTACCGTGCCCACGGACCCGTTAACATTTTGTGGGTTCCATTGCTG‑‑TTAAACAGGGGGGTTATTTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGaa < 1:1492968/146‑1 (MQ=255) ccTAACCTGCCCAACGCACCGATAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGGTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGc < 1:692600/149‑1 (MQ=255) cTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGaa > 1:398794/1‑144 (MQ=255) cTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGaa < 2:398794/144‑1 (MQ=255) cTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCa < 2:1419911/149‑1 (MQ=255) tAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAg < 2:373524/149‑1 (MQ=255) tGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTcacc > 1:263604/1‑149 (MQ=255) ccAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTGTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCAcg > 2:11251/1‑149 (MQ=255) aaCGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCAcgcc > 1:472347/1‑149 (MQ=255) gCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCcgcg > 2:337437/1‑149 (MQ=255) cACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCTAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGATTAGCAGTCACAACGCCGCGa > 1:319612/1‑149 (MQ=255) cACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGa < 2:25752/149‑1 (MQ=255) cGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGatat < 2:437299/149‑1 (MQ=255) cGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGatat < 1:959234/149‑1 (MQ=255) tAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTcc > 2:860020/1‑148 (MQ=255) tAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCg > 1:717694/1‑149 (MQ=255) aaCAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGc > 2:708717/1‑149 (MQ=255) aCAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGcc > 2:514386/1‑149 (MQ=255) aaTTTGTGGGTTACATTGCAGA‑TCAAACATGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCa > 1:89274/1‑149 (MQ=255) aaTTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCa > 2:475857/1‑149 (MQ=255) aTTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCAc < 1:514386/149‑1 (MQ=255) ttGTGGGTTACATT‑CATATTCAAAC‑CGCCGCCCA‑ATTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGc < 1:1218187/149‑1 (MQ=255) tgGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCa > 1:1437644/1‑149 (MQ=255) ggTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAgc > 2:1502093/1‑148 (MQ=255) cATTGCAGA‑TCATACATGAGGCTCA‑TTTTCGCCAGACACTCTGCGGCAAGAGGTTCTAAACCTGCACATAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACg < 1:234983/149‑1 (MQ=255) aTTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACgg < 1:412573/149‑1 (MQ=255) aTTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACgg < 1:171071/149‑1 (MQ=255) gCAGA‑TCATACAGGCGTCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCAGAGATATTCGCCCACCGCCAGACTACGGGCa < 2:1275874/149‑1 (MQ=255) cAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCat > 2:34442/1‑149 (MQ=255) aGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCata > 2:1052636/1‑149 (MQ=255) gA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCataa > 1:1022883/1‑149 (MQ=255) cAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCAtaataa < 2:1347989/149‑1 (MQ=255) aaaCAGGCGGCTCA‑TTTTCTCCAGACACTCAGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAAc < 1:1406532/149‑1 (MQ=255) aaaCAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAAc > 1:434269/1‑149 (MQ=255) aaCAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACt < 2:263604/149‑1 (MQ=255) aaCAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACt > 1:1007327/1‑149 (MQ=255) ggcTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCcgcg > 2:261757/1‑149 (MQ=255) cTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGAc > 2:15767/1‑149 (MQ=255) tCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGAcc < 2:347082/149‑1 (MQ=255) ttttCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGtt > 1:805414/1‑149 (MQ=255) ttttCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGtt > 1:953451/1‑149 (MQ=255) tttCTCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGttt < 1:1491180/149‑1 (MQ=255) tttCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGttt > 1:845166/1‑149 (MQ=255) ttCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTc < 1:734894/149‑1 (MQ=255) ttCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTc < 2:389746/149‑1 (MQ=255) cGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTccc > 1:1108319/1‑148 (MQ=255) cGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCca < 1:882111/149‑1 (MQ=255) cGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCca < 2:446605/149‑1 (MQ=255) ccAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCcaca < 1:34442/149‑1 (MQ=255) acTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGGCCGTTTCCTCACTGCTc > 1:979274/1‑149 (MQ=255) tctGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCAc > 2:1356610/1‑149 (MQ=255) cGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCa > 1:1261903/1‑149 (MQ=255) gCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTAACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATACTAACAGTCCGCGACCGTGTCAACACTGCTCACCGCACg > 2:566360/1‑149 (MQ=255) cAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCAACGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACgg > 1:880256/1‑149 (MQ=255) aaCAGGTTCTTAACCTTCACTTTAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGGGGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACTGTTTCCACACTTCTCACCGCACggg < 2:1217363/149‑1 (MQ=255) aaCAGGTTCTAAACCTGAAATTTAATTTATGTGCAGTGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACggg < 2:82458/149‑1 (MQ=255) ggTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGggcggc < 2:1034927/149‑1 (MQ=255) ggTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGggcggc < 2:805414/149‑1 (MQ=255) gTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGgcggcg > 1:47203/1‑149 (MQ=255) ttCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCga > 2:1122819/1‑149 (MQ=255) tCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCgag > 1:1056052/1‑149 (MQ=255) atactcTGCACATAAATTTAAGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGaa > 1:1264057/6‑149 (MQ=255) tactcTGCACATAAATTTAAGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGaaa > 1:746/5‑149 (MQ=255) tcTGCACATAAATTTAAGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGAAATcc < 2:1264057/148‑1 (MQ=255) cTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGAAATccc < 2:1056052/149‑1 (MQ=255) cTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGAAATccc > 2:1234534/1‑149 (MQ=255) cTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGAAATccc < 2:1261903/149‑1 (MQ=255) cACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGAAATCCCAAc < 1:1041868/149‑1 (MQ=255) cACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGAAATCCCAAc < 1:186888/149‑1 (MQ=255) | AACACAGCCGGGTAAACGCAATCCGGGCCGCGCCGCGCCTAACCTGCCCAACGCACCGTTAACAATTTGTGGGTTACATTGCAGA‑TCAAACAGGCGGCTCA‑TTTTCGCCAGACACTCTGCGGCAACAGGTTCTAAACCTGCACTTAAATTTATGTGCAGAGTATGGCGGGCTATATCCGGAATAGCAGTCACCACGCCGCGATATTCGCCCACCGCCAGACTACGGGCATAATAACTGTCCGCGACCGTTTCCACACTGCTCACCGCACGGGCGGCGAGAAATCCCAAC > NC_000913/2147208‑2147496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |