| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,351,228 | G→C | 7.8% | intergenic (‑189/+179) | fabI ← / ← ycjD | enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/DUF559 family endonuclease‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,351,228 | 0 | G | C | 7.8% | 942.1 / 20.1 | 294 | intergenic (‑189/+179) | fabI/ycjD | enoyl‑[acyl‑carrier‑protein] reductase, NADH‑dependent/DUF559 family endonuclease‑related protein |
| Reads supporting (aligned to +/- strand): ref base G (116/150); new base C (23/4); total (140/154) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.00e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 302 total aligned reads displayed.
ATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAGC > NC_000913/1351079‑1351377 | ttCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑g < 1:2899660/150‑1 (MQ=255) tcgtcgTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTGCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑gg < 1:494312/150‑1 (MQ=255) tcgtTTTAGTAAACAGTACGAACAGCTAAACGGTTATTATACTCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGa < 2:2662455/150‑1 (MQ=255) cgtTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGAc < 1:3216660/150‑1 (MQ=255) ttttAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCGCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCg > 2:5691374/1‑150 (MQ=255) tttAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTGCCCTCACCCTAACCCTCTCCCCAGTGGGGGGA‑GGGGTCCGt > 2:4791098/1‑150 (MQ=255) ttAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTa < 1:3408603/150‑1 (MQ=255) aGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTAtt < 1:5291293/150‑1 (MQ=255) aGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCAACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTAtt < 2:2043481/150‑1 (MQ=255) tAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATtgt < 2:1319911/150‑1 (MQ=255) tAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATtgt > 2:2933217/1‑150 (MQ=255) aaaCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATtgtg < 1:4087589/150‑1 (MQ=255) aaaCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATtgtg < 2:5479725/150‑1 (MQ=255) aCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCa < 1:1115778/150‑1 (MQ=255) aCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCa < 2:1792462/150‑1 (MQ=255) aCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCa < 1:1688544/150‑1 (MQ=255) aCAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAAACCAATCCCCAGAGGGGCGA‑GGGGCCCGTATTGTGCa > 2:1885020/1‑150 (MQ=255) cAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCCGAGGGGCGA‑GGGGACCGTATTGGGCaa > 2:3806615/1‑150 (MQ=255) cAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCACACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGcca > 1:1414161/1‑148 (MQ=255) cGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAt‑t < 1:2550480/150‑1 (MQ=255) cGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAt‑t < 1:5509204/150‑1 (MQ=255) cGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCGTTTCCCCGCACCCAAACCCTCTCCCCAGAGGGGCGA‑GGGGCCCGTATTGTGCAAAAAt‑t > 1:4321651/1‑150 (MQ=255) gAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCAAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGGATTGTGCAAAAAT‑Tg > 2:3230642/1‑150 (MQ=255) gAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCGCACCCAAACCCACTCCCCACAGGGGCGA‑GGGGACCCTATTGTGCAAataatt > 2:323837/1‑147 (MQ=255) aGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTAc < 1:5913371/150‑1 (MQ=255) aaaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCa < 1:1241950/150‑1 (MQ=255) aaaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCAAAACCACACCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAAAAA‑TTTTAACCCa > 1:1343703/1‑150 (MQ=255) aaaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCACACCCAAACCCACTACCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TTTTAccccc > 1:832745/1‑149 (MQ=255) aaCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTACCCCCCACCAAAACCAAAACCCACAGGGGCGC‑GGGGGCCCGATTTTGGAAAAATATTTTAcccac > 1:2092643/1‑148 (MQ=255) aCGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTACCCACACCCAAACCCACTACCCAGCGGGGCGA‑GGGGCCCGTATTGTGGCAAAAT‑TGTTACCCCAGc > 1:4735800/1‑150 (MQ=255) ggTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGcaa > 2:5945193/1‑150 (MQ=255) attatAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCaacaaa < 1:2012545/150‑1 (MQ=255) attatAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCaacaaa < 2:15809/150‑1 (MQ=255) ttatAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCaacaaac < 1:657134/150‑1 (MQ=255) ttatAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTAGTGTGCAAATAT‑TGTTACCCCAGCaacaaac > 2:4475988/1‑150 (MQ=255) ttatAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAAACCTCACCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAA‑TTTTAACCCCGCaacaaac > 2:3586672/1‑150 (MQ=39) ataATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAg < 1:3047582/150‑1 (MQ=255) taATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAgg < 1:2993979/150‑1 (MQ=255) taATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAgg < 1:3739933/150‑1 (MQ=255) aaTCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGc > 2:3388701/1‑150 (MQ=255) tCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCACCGCACCCGAACCCACGCCCCCGGGGGGGGC‑GGGGGCCGGATTGTGGCAAAAT‑TGGTTCCCCAGCACCCACCACGCTc > 2:2284686/1‑150 (MQ=255) tCAACCTGGCTGTGAGTAGATATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTc < 1:4825111/150‑1 (MQ=255) aaCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCAt < 2:1876177/150‑1 (MQ=255) aaCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTACCCACACCCAAAACCAAACCCCAGAGGGGGGAGGGGGCCCGCATT‑TTCAAAAAT‑TTTTTACCCCCCAACAAACAAGcacaa > 1:2431063/1‑149 (MQ=255) aCCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATa < 2:2465219/150‑1 (MQ=255) cTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACa < 1:5177713/150‑1 (MQ=255) cTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCACACCCAAAACCAAACCCCAAAGGGGCGA‑GGGGACCCAAATTTGCAAAAAA‑TTTTAACCCAACAACAAAAAAGCTCATACa > 1:1462525/1‑150 (MQ=255) tGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAg > 2:3502453/1‑150 (MQ=255) tGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCACACCCAAAACCACAACCCCCACGGGCGA‑GGGGGCCCTAATGTGCAAAAAA‑TGTTAACCCACCCACAAACACGCCCaaaaac > 1:1303187/1‑145 (MQ=255) ggCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGc < 1:935101/150‑1 (MQ=255) ggCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGc < 2:4626752/150‑1 (MQ=255) ggCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCAGCCGCAGGGGGGGCGCATTTCCCCGCACCCAAACCCGCTCCCCCGCCGGGCGA‑GCGGACCGTCTTGTGCACATAT‑TGTTACGCCAGCGACACACACGCGCATACAGc > 2:846428/1‑150 (MQ=255) gCTGTGAGTAGCTATAGGTGCCAGGTCCGACCGGAGCTGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCCCATACAGcc < 1:1573648/150‑1 (MQ=255) cTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGccc < 1:2328479/150‑1 (MQ=255) tgtgAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCACACACAAAACCACTCACCACAGGGGCCA‑CGGGTCCCGAATGTTCAAAAAA‑TTTTAAACCAGAAACAAAAACGCGCAAACAAcccc > 2:2820988/1‑150 (MQ=255) tgAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTa < 1:4668421/150‑1 (MQ=255) tgAGTAGCTATAGGTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTa < 2:401518/150‑1 (MQ=255) gAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTaa < 1:2954275/150‑1 (MQ=255) gAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTaa < 1:4401694/150‑1 (MQ=255) gTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCACACCCAAAACCACACCCCAGAGGGGCGA‑GGGGGCCCTATTGTGCCAAAAA‑TGTTACCCCACCAACAAACAGGCTCAAACACCCCCAAAcc > 1:5761171/1‑150 (MQ=255) gTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCAAACCCAAAACCAAAACCCCCAGGGGCGC‑GGGGGCCCGATTTTTCAAATAA‑TTTTAACCCACCAACAAAAAAGCGCAAAAAGCCCCCAAcc > 1:1904488/1‑150 (MQ=255) gCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCGAAACCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCCAATAT‑TGTTACCCCAGCAACAAAAACGCTCATACAGCCCCAAACCCATTCATGGCGa > 2:558499/1‑150 (MQ=38) aGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATgg < 2:5212467/150‑1 (MQ=255) gTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCGTTTCCCCACACCCGAACCCTCTCCCCAGAGGGGCGC‑GGGGACCGTATTGTGCAAATAA‑TGTTACCCCAGCAACAAACAGGCTCCTACAGCCCCCAACCCGTTCATGGCGATGGcg > 2:5138569/1‑149 (MQ=255) gACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGa < 2:534860/150‑1 (MQ=255) aCCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCGCACCCAAACCCGCGCCCCAGAGGGGCGC‑GGGGACCGTAGAGTGCAAATAA‑TGTTACCCCCGCAACAAACACCCAACTACCCCCCCAAACCCATGCAAGGCCATGGCAGGGAc > 2:3082585/1‑150 (MQ=255) cAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAg < 1:3822986/150‑1 (MQ=255) aGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGa < 1:2695112/150‑1 (MQ=255) gCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGAcc < 1:3571011/150‑1 (MQ=255) cTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGCGGGGCGT‑GGGGACCCTATTGTGCAAATAT‑TGTTAACCCAGCAACAAACAGGCTAATACAGCCCCGAACCCATTCATTGCGATGGCTGGGACGGTTCAGACCt > 2:3287634/1‑150 (MQ=38) cGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGc < 2:1938185/150‑1 (MQ=255) cGGCAGGGGGGGCGCTTTTCCCCTCACCCGAACCCTCTCCCCCGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATCCAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGc < 2:334598/150‑1 (MQ=255) ggCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGcc < 1:2258555/150‑1 (MQ=255) gggggggCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAat < 1:2201214/150‑1 (MQ=255) ggggCGCTTTTCCCCTCACCCAAAACCACAACCCAGAGGGGCGA‑GGGGACCGTATTGTGCCAAAAA‑TGTTACCCCAGCCACAAACAGGCTCAAACAGCCCCGAACCCATTCAAGGCGATGGCTGGGACGGTTCAGACCGTTCCGAATAtt > 2:4211584/1‑150 (MQ=255) gggCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTAT‑‑TGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATtctc < 2:797651/150‑1 (MQ=255) gcgcTTTTCCCCGCCCCCTAAACCAATCCCCAGAGGGGCGA‑GGGGACCCGATTTTGCAAATAT‑TTTTACCCCAGCAACAAAAACGCTCATAAATCCCCAAACCCTTTCATGGCGATGGCTGGGACGGGTCAGACCATTCCGAATATtctc > 2:2542917/1‑150 (MQ=255) cTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAg < 2:1636504/150‑1 (MQ=255) tttCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCa < 2:1214967/150‑1 (MQ=255) ccTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGtc > 2:3222402/1‑150 (MQ=255) ccTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGtc < 1:2418860/150‑1 (MQ=255) aCCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCa > 1:5562006/1‑150 (MQ=255) aCCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCa < 1:5377374/150‑1 (MQ=255) ccTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGGCGAATATTCTCCAGCACCGTCTCCATg > 2:5048374/1‑150 (MQ=255) ccTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATg > 1:1024347/1‑150 (MQ=255) cTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGt > 2:1384332/1‑150 (MQ=255) tAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAATAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGtt > 2:1279797/1‑150 (MQ=255) gtccccTCGCCCCTCTGGGGAGA‑GGGTACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGtt > 1:3352914/4‑150 (MQ=255) aaCCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGttt > 1:770436/1‑150 (MQ=255) ccTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTca > 1:4062226/1‑150 (MQ=255) ccTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTca < 2:2871086/150‑1 (MQ=255) ctctCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcac > 2:5012367/1‑150 (MQ=255) ctctCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcac > 2:2220868/1‑150 (MQ=255) tctcCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcacc > 2:2749209/1‑150 (MQ=255) tctcCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcacc > 1:3500293/1‑150 (MQ=255) tcCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTcaccac < 2:3011764/150‑1 (MQ=255) ccAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCacgac > 2:1032864/1‑150 (MQ=255) ccAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCacaac > 1:3981143/1‑150 (MQ=255) ccAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCacaac > 2:37276/1‑150 (MQ=255) cAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCGTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCacaaca < 2:23320/150‑1 (MQ=255) | ATCAGGCGATTCGTCGTTTTAGTAAACAGTACGAACAGATAAACGGTTATTATAATCAACCTGGCTGTGAGTAGCTATAGTTGCCAGGTCCGACCGGAGCAGGCTGCGGCAGGGGGGGCGCTTTTCCCCTCACCCTAACCCTCTCCCCAGAGGGGCGA‑GGGGACCGTATTGTGCAAATAT‑TGTTACCCCAGCAACAAACAGGCTCATACAGCCCCTAACCCTTTCATGGCGATGGCTGGGACGGTTCAGACCTTGCCGAATATTCTCCAGCACCGTCTCCATGTTTTCACCACAACAGC > NC_000913/1351079‑1351377 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |