| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,504,855 | T→G | 5.7% | intergenic (+72/+80) | frlR → / ← yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,504,855 | 0 | T | G | 5.7% | 708.9 / 2.9 | 273 | intergenic (+72/+80) | frlR/yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base T (88/162); new base G (9/14); total (97/176) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.20e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 282 total aligned reads displayed.
GACAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATG > NC_000913/3504706‑3505004 | aCAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGtt > 1:2915632/1‑150 (MQ=255) aaaCCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACTTTcc > 1:5166526/1‑150 (MQ=255) aaCCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTccc < 2:2415949/150‑1 (MQ=255) aCCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTcccc < 2:2623374/150‑1 (MQ=255) aCCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTcccc > 1:1912830/1‑150 (MQ=255) ccGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGTATTTTACATCCCGTACGttggcct > 2:6155050/1‑145 (MQ=255) ggTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTgcccgcc > 2:6750132/1‑147 (MQ=255) ggTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCa < 1:754525/150‑1 (MQ=255) ggTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCa < 2:675087/150‑1 (MQ=255) gTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCacac > 1:1616055/1‑150 (MQ=255) gTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCAc < 1:1592462/150‑1 (MQ=255) tGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTACCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCAcc < 1:6266223/150‑1 (MQ=255) aCGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACAcccaa > 2:2701386/1‑148 (MQ=255) ctcCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAAccc < 1:4150448/150‑1 (MQ=255) cGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCccct < 1:4879755/150‑1 (MQ=255) cGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGAGAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCctct > 2:3594293/1‑150 (MQ=255) gAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCtctc < 1:4811032/150‑1 (MQ=255) gAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGGTGAATTTTACATCCCGTACGGTCCCCTCACCCGAACCCtctc > 2:3849180/1‑150 (MQ=255) aaCTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTcc < 1:903468/150‑1 (MQ=255) aCTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTccc < 2:6068599/150‑1 (MQ=255) aCTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTccc < 2:760970/150‑1 (MQ=255) cttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGACCACACCCAAAACCAAACCCCaa > 1:3097307/1‑150 (MQ=38) ttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCaaa < 2:1246445/150‑1 (MQ=255) ttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCGAACCCACTCCCCcaa > 2:3984342/1‑150 (MQ=255) gtcgcgCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTGCATCCCGTACGTTCCCCCCACCCTAACCCTCTCCCCACAgggg > 2:4983176/3‑150 (MQ=255) ccGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGc < 2:154520/150‑1 (MQ=255) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAg < 1:4383702/150‑1 (MQ=255) cgcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAg < 2:5037770/150‑1 (MQ=255) gcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAgg < 1:3627106/150‑1 (MQ=255) gcCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCGCCCCTTTGGGGAGAgg < 2:6018759/150‑1 (MQ=39) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAggg < 2:4713722/150‑1 (MQ=255) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCGCCCCTTTGGGGAGAggg < 1:598957/150‑1 (MQ=39) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCAAACCCACACCCCAAAGGGGCGAggg > 2:2280677/1‑150 (MQ=255) caaaTCGCAACAACATAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCGCCCCTTTGGGGAGAggg < 1:7223832/148‑1 (MQ=38) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCACACCCAAAACCACTACCCCAAGGGGGGAgggg > 1:4974904/1‑150 (MQ=38) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCCTAACCCTCTCCCCAAAGGGGCGAgggg > 1:5447108/1‑150 (MQ=255) ccTTAACTATTGATAATAAAAGACATTACCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑a < 2:4628358/150‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑a < 1:5659219/150‑1 (MQ=255) ccTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑a > 2:5886799/1‑150 (MQ=255) ttAACTATTGATAATAAAAGACATTAACCGTAGTCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTTCCCGCACACAAAAACCCACCCCCAACGGGCGAGGGGA‑CAGCTCATT‑Acc > 2:2481416/1‑149 (MQ=37) ttAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACg < 1:5038987/150‑1 (MQ=255) ttAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCCAAACCCACACCCCAAAGGGGCGAGGGGG‑CCGGTAAGT‑ACg > 2:6687863/1‑150 (MQ=38) aaCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTAAATCCCGTACGTTACCCACACCCAAACCCACACCCCAAACGGGGGCGGGGG‑CCGGTCAGT‑AAGGa > 1:3414453/1‑150 (MQ=37) aCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGaa < 1:6936707/150‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTa < 2:6126097/150‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTa < 2:5537982/150‑1 (MQ=255) gATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATAGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCGCCCCCGAAACCCCAACCCCAACGGGCGGGGGGC‑CCGGTGCAT‑ACGGCATTTAGc > 1:5702520/1‑150 (MQ=25) gtaataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTAAATCCCGTACGTTGCCCGCACCCAAAAACCCCCCCCAAAAGGGGGGGGGGG‑CCGGTGAGT‑GAGGAATTTATCt > 1:3217844/2‑150 (MQ=25) ataataAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCCCACCCAAACCCACTCCCCCAACGGGCGAGGGGG‑CCCGTCAGT‑ACGGCATTTATCt > 1:3806155/1‑150 (MQ=37) ataataAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCCAAACCCACACCCCAAAGGGGCGGGGGGG‑CCCGTCAGTAAGGGAAttttgt > 1:6515076/1‑147 (MQ=37) ataaAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGa < 1:6095328/150‑1 (MQ=255) aaaaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACg < 1:6750616/150‑1 (MQ=255) aaaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACgg < 1:1735675/150‑1 (MQ=255) aGACATGAACCGTAGGCCGGATAAGATGCGCCAGCATCACATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTg < 2:4546434/150‑1 (MQ=255) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCAAACCCACACCCCAAAGGGGCGACGGGA‑CCGTTCCGT‑ACGGAATTTAGCATGACGGTGCTATc > 2:6554163/1‑150 (MQ=38) ttAACCGTAGGCCGGATAAGATGCGCCAGCATCGCAACCGGCGATGCTGGCGCGTTGAATTTTAAATCCCGTACGTTCCCCACACCCAAAACCACACCCCCAACGGGCGAGGGGG‑CCGTTCAGT‑ACGGAAATTAGCGTTACGGTGCGAta > 1:7213941/1‑149 (MQ=37) tAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATcc < 1:4944121/150‑1 (MQ=255) tAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCACACCCAAACCCACAACCCCAACGGGCGGGGGGACCCGTACGTA‑ACGGAA‑TTAGCATTGCGGTGCTAtac > 1:4786795/1‑148 (MQ=19) aCCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAg < 2:3436306/150‑1 (MQ=255) tAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTACCCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCAtt < 2:1979879/150‑1 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCCAACCCACAACCCCAAGGGGCGGGGGGA‑CCGGTCAGT‑GAGGAATTTTGCGTTAACGTGCTATACAggcataaa > 2:5557593/1‑143 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACACTAAACCACAACCCCAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCAATACAGCAATaaa > 2:4364793/1‑150 (MQ=255) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATCCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTaaa < 2:1898422/150‑1 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCCAAACCCACTCCCCCAACGGGCGAGGGGC‑CCGTTCAGT‑ACCGAATTTAGCGTGACGGGGCTATCCCGCAATAAAAAca > 2:6440115/1‑149 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCACAACCGAACCCGCACCCCAAAGGGGGGAGGGGG‑CCCGTCAGT‑ACCGCAATTATGTTGTCCGTGCTAAACAGCAATaaaaaaa > 2:2064504/1‑146 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCCAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTg < 1:4792971/150‑1 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCACAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTg < 1:1640660/150‑1 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTg < 1:1396524/150‑1 (MQ=255) aTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTg < 1:61683/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCCAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:1747868/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:1384859/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 1:3510358/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:1912830/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:5447108/150‑1 (MQ=255) gtccatcgcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGc < 2:7013918/144‑1 (MQ=255) gATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCCGAAACCTCTACCCCAATGGGCGGGGGGA‑CCGGTCAGT‑ACGGGCTTTATCATTACGGTGCTCTCCAGCATTAAAAACTGGCaa > 2:5624124/1‑150 (MQ=255) gATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCAAACCCTAAAACACAACCCAAAAGGGCGAGGGGG‑CCGTTAAGT‑ACCGAATTTAGCTTGGAGGTTCTATAAAGCATTAAAAACAGGCaa > 2:6210415/1‑150 (MQ=255) aTGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCCTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAAt < 1:5362872/150‑1 (MQ=255) tGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATa < 1:701671/150‑1 (MQ=255) cgcCAGCATCGCCGGATGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCTCACCCGAACCCGCTACCCAAAGGGGCGAGGGGC‑CCGGTCAGT‑ACGGAAATTAGCTTGTCGGTGCTAACCAGCATTAAATACTGGCAATaaa > 2:6253448/1‑148 (MQ=255) gcCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATActc < 2:220490/150‑1 (MQ=255) aGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCa < 1:1093768/150‑1 (MQ=255) aGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATACAGCATTAAATACTGGCAATACTCTCa > 2:4141929/1‑150 (MQ=255) atcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCCGAACCCTCTCCCCACAGGGGCGAGGGGA‑CCGGTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCACTACTCTCACGc > 2:884745/1‑150 (MQ=255) atcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCATACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGGTCAGT‑ACGGAAATTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCAccc > 1:3926178/1‑148 (MQ=255) ccGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATcc < 1:4671044/150‑1 (MQ=255) gCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCAcc < 1:229623/150‑1 (MQ=255) tGGCGCGTAGAATTGTACATCCCGTACGTTCCCCTCACCCTACCCCTCTCCCCAACGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTATCTTGACGGTGCTATCCAGCATTAAATACGGGCAATACTCTCACGCAAAATCCGCAGCACCGt < 2:4916727/150‑1 (MQ=255) ggCGCGTTGAATTTTACATCCCGTACGGTCCCCTCACCCTAACCCTCCCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGtc < 1:2559113/150‑1 (MQ=255) gcgcGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGtct < 2:5702520/150‑1 (MQ=255) tGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCAc < 1:5886799/150‑1 (MQ=255) ttttACATCCCGTACGTTCCCCTCACCCAAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACCGAAATTAGCTTGACCGTGCTAACCAGCATTAAAAACTGGCAATACACTCACGCAAAATCCGCACCACCCTCACATCAccccg > 2:5287672/1‑147 (MQ=37) ttACATCCCGTACGGTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGc < 1:4606174/150‑1 (MQ=255) cccGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCg < 2:5159731/150‑1 (MQ=255) ccGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCgg < 2:3217844/150‑1 (MQ=255) ccGTACGTTCCCCACACCCGAAACCTCTCCCCAAAGGGGCGCGGGGC‑CCGTTCAGT‑ACGGAATTTAGCATGACGGTGCTATCCAGCATTAAAAACTGGCAATACTCTCACCCAAAATCCGCAGCACCGTCTCTTCACCGCAGCGATTAgg > 2:2981532/1‑150 (MQ=255) gTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGt > 2:4644165/1‑150 (MQ=255) tACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGtt < 1:1208524/150‑1 (MQ=255) cGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑TCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTaa < 1:935590/150‑1 (MQ=255) gTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAAt < 1:6741470/150‑1 (MQ=255) | GACAAACCGGTGCACGTCTCCGAACTCTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCTCTCCCCAAAGGGGCGAGGGGA‑CCGTTCAGT‑ACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATG > NC_000913/3504706‑3505004 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |