| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,908,506 | C→G | 5.3% | intergenic (‑140/+43) | pstB ← / ← pstA | phosphate ABC transporter ATPase/phosphate ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,908,506 | 0 | C | G | 5.3% | 2259.3 / 27.3 | 671 | intergenic (‑140/+43) | pstB/pstA | phosphate ABC transporter ATPase/phosphate ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base C (375/248); new base G (4/42); total (379/292) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.40e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 705 total aligned reads displayed.
CCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCG > NC_000913/3908357‑3908655 | ccATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCctc < 2:1724426/150‑1 (MQ=255) cATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCctct < 1:7817097/150‑1 (MQ=255) aTACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTg > 2:1236115/1‑150 (MQ=255) tACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTgg < 1:6232008/150‑1 (MQ=255) aCTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTggg < 2:6366373/150‑1 (MQ=255) tCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGga > 1:7012188/1‑150 (MQ=255) aTTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga < 1:7649656/150‑1 (MQ=255) ttGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGagag < 2:162677/150‑1 (MQ=255) tGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAgg < 2:4373624/150‑1 (MQ=255) tGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAgg > 1:2823089/1‑150 (MQ=255) tGCAATCTTGTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTCAAAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGagag < 2:1404660/150‑1 (MQ=255) gCAATCTGTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAggg < 2:3670564/150‑1 (MQ=255) aTCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTa < 2:2416747/150‑1 (MQ=255) tctggtCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAg < 1:2697431/145‑1 (MQ=255) ttttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAggg > 2:793793/1‑150 (MQ=255) tttCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGt > 1:1939868/1‑150 (MQ=255) tCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGa > 2:7532899/1‑150 (MQ=255) tCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑ATGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGa > 1:2550899/1‑150 (MQ=255) ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCg > 2:7439015/1‑150 (MQ=255) ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCg > 1:7535299/1‑150 (MQ=255) ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCg > 2:2140488/1‑150 (MQ=255) ccTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTGAGGGTGAGGGGACAACCg > 2:6035143/1‑150 (MQ=255) gATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCgtgt > 2:6531959/1‑150 (MQ=255) aTGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTc > 1:2044151/1‑150 (MQ=255) gCAGTTCGCTACTCTGGCTTACCGTTGGCCGGATGAGGCGTTCACGCCGCATCGGGCAAAGTTTTAACG‑TTGTACATAGTC‑AAAACGGCGCTCGGTCGGTCCCCTCGCCCCTGTGGGGTGTGGGTTAGGGTGCGGGGAAAACCGTGTCAg < 2:7649606/150‑1 (MQ=255) gCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACA‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCACTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAg > 1:5597660/1‑150 (MQ=255) ttCGCTAATCTGTCTATCCGTAGGCCTTATAAGGCTTACACGCCGAATCGTGCAAA‑TTTTAACCGGTTTACAGAGAA‑AAAATGGGGCTGGGTGGGCCCCCTCGCCCCTGGGGGTTGTTGTTTTGGGTGCGGGGAAAACCGTGTCAGCAat < 2:7585502/150‑1 (MQ=255) ttCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAat > 1:4153107/1‑150 (MQ=255) gCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATc > 1:5894349/1‑150 (MQ=255) aaTCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAc < 2:5085357/150‑1 (MQ=255) ggCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCCTCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCgtgt < 2:6126451/150‑1 (MQ=255) gCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGtt > 2:679690/1‑150 (MQ=255) cTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGCGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGGGCGGGTGAGGGGACACCCGTGTCAGCACTATCAACCGTGttt > 2:5662318/1‑150 (MQ=39) ccGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttc > 1:1318355/1‑150 (MQ=255) gTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTAttctt > 1:4581255/1‑150 (MQ=255) cggCCGTATCTGGGGTTCACGCCGCACCCGGAAAAGTGTTACCC‑GTGTACAGAGAC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGTGTGGTTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCg < 1:1754617/149‑1 (MQ=255) ccGGATGCGGCGTGAACGCCTGATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaa > 2:8188501/1‑150 (MQ=38) cGGATCAGGCGTTCACGCCGAATCCGGAAAAGTGTTAACC‑GTGTACATAGTA‑AAAATGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGTAGTGGTTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaa < 1:6759618/150‑1 (MQ=255) gATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGgaga > 1:1203924/1‑90 (MQ=255) gATCAGGCGTTCACGCCGCATCCGGAAATGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCACGCCCCTCTGGGGTGTGGTTTGGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCaaaaa < 1:845047/150‑1 (MQ=255) aTCAGGCGTTCCCGCCGCACCCGGAAATGTTTTACCC‑GTGTACAGAGTA‑AAAACGGCGCTCGGTCGGTCCCCTCGCCCCTGTGGGTTGTGGTTTCGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaac < 1:3485221/150‑1 (MQ=255) aTCAGGCGTACACGCCGCATCCGCAAAAGTCTAAACC‑GTCTACAGACAA‑AAAAAGGCGCCCGGTCGGTCCCCACGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaac < 2:2604439/150‑1 (MQ=37) cAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑TTGTACTGAGTC‑AAATAGGCGCTCGGTCGTTCCCCTCGCCCCTCGGGGTAGTGGTTTAGGGTGAGGGGAAAACCGTGTCAGCTATATCAACCGTGTTTATTCTTCGCAAAaacaa < 2:1048903/150‑1 (MQ=255) cAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaacaa > 2:304007/1‑150 (MQ=255) cAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAaacaa > 1:7786762/1‑150 (MQ=255) ggCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcg > 1:532608/1‑150 (MQ=255) gtacACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGAC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGTGTGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcgc < 1:6173591/147‑1 (MQ=255) ttCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcgcg > 1:4882874/1‑150 (MQ=255) ttCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAAcgcgcg > 2:3401733/1‑150 (MQ=255) tCACGCCGCATCCGGCAAAGTGTTAACC‑TTTAACAGAGTA‑AAAAAGGCGCTGGTTGGGTCCCCTCGCCCCTCTGGGTAGTGGGTTTGGTTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACgcgcgc < 2:1536637/150‑1 (MQ=255) ccgccccACCCGGAAATGTGTTAACG‑GTGTACAGAGCA‑AAAACGGCGCTCGGTCGGCCCCCTCGCCCCTGTGGGGTGTGGTTTTGGGTGTGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCa < 1:5494586/149‑1 (MQ=255) aCGCCGCATCCGGCAATTTTTTAACG‑GTTTCCTGAGTC‑AAAACGGGGCGCGGTGGGGCCCCTCGCCCCTGTGGGGTGTGTGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCa < 2:3115541/150‑1 (MQ=255) aCGCCGCATCCGGCAATGTGTTAACC‑TTTTACTGCGTC‑AAAAGGGCGCTGGGTCGGTCCCCGCGCCCCTCTGGGGTGAGGGTTAGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCa < 2:7114972/150‑1 (MQ=255) gccgcATCCGTAATTGTTTTAACC‑GTGTACTTATAC‑AAAACGGCGCTGGGTGGGTCCCCTCCCCCCTGTGGGGTGTGTGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGa < 1:6371880/150‑1 (MQ=255) aTCCGGCATTGTTTTACCG‑GTGTACTGATTA‑AACATGGCGCTGGGTGGGACCCCTCGCCCCTGTGGGTTGTGGTTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGtt < 2:2823845/150‑1 (MQ=255) aTCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGtt > 2:3764682/1‑150 (MQ=255) aTCCGGAAAAGTGTTAACG‑GTTTACTGAGTC‑AAAACGGCGCTGGGTCGGCCCCCTCGCCCCTGTGGGGTTTGGGTTTGGGTGTGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGtt < 2:2261759/150‑1 (MQ=255) ggCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagc > 1:3341771/1‑150 (MQ=255) cAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcag > 1:5707896/1‑150 (MQ=255) aaaGTGATAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAAAAGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTcagcagc > 1:7171790/1‑150 (MQ=255) gtTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTAc > 2:1173819/1‑150 (MQ=255) cc‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGcaca > 1:1580778/1‑150 (MQ=255) cc‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCGGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATAACAACCGTGTTTATTCTTCGCAACAACAACGCGCGCCAGAAGGGTCAGCCGCAGTACGcacc > 2:5828993/1‑149 (MQ=38) tgtACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAggg > 1:8175773/1‑150 (MQ=255) tgaaccgagTC‑AAAATGGCGCTCGGTCGGGCCCCGCGCCCCTCGGGGGTGTGGGTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAggg < 1:2425734/144‑1 (MQ=255) aCAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGGTTATGCTTCGCACAAACCACGCGCGCCCGAATGGTCCGCAGCAGTCCGCACAGGGtcc > 2:5314552/1‑148 (MQ=37) gagTC‑AAAAAGGCGCTGGGTCGGGCCCCGCGCCCCTCTGGGGAGAGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGa < 1:1029089/150‑1 (MQ=255) tC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCa > 2:4720696/1‑150 (MQ=255) aaaaacGGCGCTCGTTCGGTCCCCTCGCCCCTCTGTGTAGTGGTTTTGGGTGAGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCaa < 2:2900628/149‑1 (MQ=255) aaaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAAt > 2:3245215/1‑150 (MQ=255) aaaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAAt > 2:3994480/1‑150 (MQ=255) aaaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAAt > 2:7215981/1‑150 (MQ=255) aaaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAAt > 2:6889753/1‑150 (MQ=255) caaaGGCGCTCGGTCGGCCCCCTCGCCCCTCGGGGGAGAGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATa < 1:4432096/149‑1 (MQ=255) aaaaGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATa > 1:5777164/1‑150 (MQ=255) ggCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAcccc < 1:790690/150‑1 (MQ=255) ggCGCTCGGTCGGCCCCCTCGCCCCTCTGGGGTGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATAcccc < 1:3010518/150‑1 (MQ=255) cgcTCGGCCGGCCCCCCCCCCCCTCTGGGTAGAGGGTTCTGGTGAGGGCAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCgg < 1:2177675/150‑1 (MQ=255) gcTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGc > 2:4137665/1‑150 (MQ=255) cTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAAACGTGTTTATTCTTAGCAAAAAAAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATAAATACCCCGGcc > 1:2339157/1‑150 (MQ=255) gggggggccccGCGCCCCTCTGGGGTGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAg < 1:3728067/143‑1 (MQ=255) gtcggtcCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAgg > 2:7263086/1‑150 (MQ=255) accctaacccTCTCCCCAGAGGGGCGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAgg > 2:5003460/8‑150 (MQ=255) cctaacccTCTCCCCAGAGGGGCGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGcc > 1:6920482/6‑150 (MQ=255) tcCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAt > 1:5163826/1‑150 (MQ=255) ccccTCGCCCCTCTGGGGAGAGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAtt < 2:1948200/150‑1 (MQ=255) ccccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAtt < 2:4274656/150‑1 (MQ=255) ccccGCGCCCCTCGGGGTAGTGGGTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAAtt < 2:6237806/150‑1 (MQ=255) cccTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtg > 1:2944509/1‑150 (MQ=255) ccTCGCCCCTCGGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTACGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTCCTGAACAATACCCCGGCCCAGGccccgtgc > 2:7074767/1‑144 (MQ=39) cTCGCCCCTGTGGGGTGTGGGTTTGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgct < 1:6430340/150‑1 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgct > 2:5190720/1‑150 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgct > 1:7279969/1‑150 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgct > 1:4731337/1‑150 (MQ=255) cTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgct > 2:806606/1‑150 (MQ=255) cTCGCCCCACTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgct > 1:3867540/1‑150 (MQ=255) cGCCCCTCGGGGGAGAGGTTTTGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATtgctgc < 1:313396/150‑1 (MQ=255) ctctGGGGTGCGGGTTAGGGTGCGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAAGGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTc < 1:139392/150‑1 (MQ=255) tctGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTcc > 2:4521958/1‑150 (MQ=255) tctGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTcc > 2:3513306/1‑150 (MQ=255) | CCATACTCATTGCAATCTTTTCCTCATCGTGCCTGATGCACTTCGCTAATCAGGCTTACCGTAGGCCGGATCAGGCGTTCACGCCGCATCCGGCAAAGTGTTAACC‑GTGTACAGAGTC‑AAAAAGGCGCTCGGTCGGTCCCCTCGCCCCTCTGGGGAGAGGGTTAGGGTGAGGGGAAAACCGTGTCAGCAATATCAACCGTGTTTATTCTTCGCAAAAACAACGCGCGCCAGAATGTTCAGCAGCAGTACGCACAGGGTAATGATCAATACCCCGGCCCAGGCCAATTGCTGCCATTCCG > NC_000913/3908357‑3908655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |