| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,164,546 | A→T | 9.3% | D151V (GAT→GTT) | nagZ → | beta N‑acetyl‑glucosaminidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,164,546 | 0 | A | T | 9.3% | 718.8 / 9.0 | 236 | D151V (GAT→GTT) | nagZ | beta N‑acetyl‑glucosaminidase |
| Reads supporting (aligned to +/- strand): ref base A (152/56); new base T (3/25); total (155/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.95e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 239 total aligned reads displayed.
TTGGTTGATGGCCAGCGAAATGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTA > NC_000913/1164397‑1164694 | ttggttgATGGCCAGCGAAATGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGa > 1:20118/1‑150 (MQ=255)ttggttgATGGCCAGCGAAATGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGa > 1:1856233/1‑150 (MQ=255) tggttgATGGCCAGCGAAATGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGAt < 1:2769890/150‑1 (MQ=255) tggttgATGGCCAGCGAAATGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGAt < 1:1228447/150‑1 (MQ=255) gCGAAATGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAg > 2:1594802/1‑150 (MQ=255) aTGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGa < 2:4103866/150‑1 (MQ=255) tGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAAGTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGaa < 1:361923/150‑1 (MQ=255) gATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAAt > 1:653716/1‑150 (MQ=255) tCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTCTGC‑ATGAAGCCGGAATGa > 2:3089782/1‑150 (MQ=255) tCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGa > 2:1365349/1‑150 (MQ=255) cGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGaa < 1:4036773/150‑1 (MQ=255) gCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGaaa < 2:2577503/150‑1 (MQ=255) gCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGaaa > 1:3497579/1‑150 (MQ=255) gCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGaaa < 2:4019638/150‑1 (MQ=255) gCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGaaa > 1:76415/1‑150 (MQ=255) cTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGaaaa < 2:3371906/150‑1 (MQ=255) cTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGaaaa < 2:4039818/150‑1 (MQ=255) gATATCTGGTTTGCGCGTGTGCTGTTGGTGGGGCATAGCCGGGGGGCGATTGGCGAGCGTTCTTATCAGGCCGATCAACAAAAAGCCCGGGCAATGGCCAGCCGGTTTATGGTTGGTAGGC‑ATGAAGCCGGATTGAAAACGACCGGGaaa < 2:3056985/150‑1 (MQ=255) gATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGaaa > 2:2761289/1‑150 (MQ=255) tatCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAATCCATGGCAATTGCCAGCCGGTTTCTTGATGGTATTC‑ATGAAGCCGGAATGAAAACGACCGGGAAaca > 1:1326337/1‑150 (MQ=255) cAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACtt > 2:1617831/1‑150 (MQ=255) aGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTc > 2:1698692/1‑150 (MQ=255) aGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGACCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTc > 2:591046/1‑150 (MQ=255) tgtgCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGAGGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACgg > 2:3326344/1‑150 (MQ=255) gtGGTTGTCGGGCATATCCGCGCGGCGTTTGGCGAGCGTTCTTATCATGCCGATCCACAAAACGCCCTGGCAATTGCCAGCGGGTTTATTGATGGTATGA‑ATGACGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCa < 2:3022694/149‑1 (MQ=255) cTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCa > 1:2068800/1‑150 (MQ=255) cTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCa > 1:1955522/1‑150 (MQ=255) cTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCa > 1:2615630/1‑150 (MQ=255) tGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAg > 1:3070968/1‑150 (MQ=255) tGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATAGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACCCGGTGCAg > 2:3406124/1‑150 (MQ=255) tggggattatCCGCGCGGCTTTTGGCTGGCTTTCTTATCATGCCTATCAAAAAAACGCCCTGTAATTTGCCAGCGGTTTTTTTTTTGGTATGC‑TTGACGCGGGAATCAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACgg < 2:719990/143‑1 (MQ=255) tCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACgg > 2:2595051/1‑150 (MQ=255) tCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACgg > 2:3594183/1‑150 (MQ=255) tCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACgg > 1:2372274/1‑150 (MQ=255) tCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGAAATTGCCAGCCGGTTTATTGTTGGTATGC‑ATGACGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACgg < 2:667237/150‑1 (MQ=255) gCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGa > 1:3360948/1‑150 (MQ=255) atatCCGCGGGGCGCGGGGGGAGCGTTCTTATCATGCCGACCCACAAAACGCCCTGGCATTGGCCCGCGGGTTTATTTATGGTATGC‑ATGACGCCGGAATGAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACt < 2:2050749/150‑1 (MQ=255) tCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGGCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTcac > 1:1245707/1‑150 (MQ=255) gggggttttGGCGAGGTTTCTTATCTTGCCTATCCAAAAAATGCCCTGGATTTTGCCAGCGGGTTTTTTGTTGTTTTTC‑ATTATGCGGTATTCAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACaaa < 2:495229/143‑1 (MQ=255) gcggctTTTGGCGCGCGTTATTACCAGGCCGACCCAAAAAAACCCCTGGAATTTGCCAGCCGGTTTATTGATGTTATGC‑ATTAAGCGGTAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACaaa < 2:527454/150‑1 (MQ=255) gcggctTTTGGCGAGCGTTCTTATCATGCCTATCCACAAAAAGCCCTGGAAATTGCCAGCGGGTTTATTGTTGGTATGC‑ATGAAGCCGTAATTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACaaa < 2:2035827/150‑1 (MQ=255) gcggcgATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACaaa > 2:388629/1‑150 (MQ=255) cggcgATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAg > 2:2849486/1‑150 (MQ=255) gATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAac > 1:3520372/1‑150 (MQ=255) tGGCGTGCTTTCTTATCATGCCGATCCACAAAAAGCCGTGGCATTTGCCAGCCGGTTTTTTGTTGTTTTGC‑ATGATGCCGGATTGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACAcc < 2:4133145/150‑1 (MQ=255) gcgtgggTTCTTATCATGCCTATCCACAAAAAGCCCTGGCATTTGCCTGCCGTTTTTTTGTTGTTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGt < 2:2232849/144‑1 (MQ=255) ccgcgCGTTCTCACCATCCCCAACCCCAAAACCCCCTGCCATTCCCCCGCCGTTTTA‑TGTTTTTATTCAATGATGCCGCATTCAAAACGACCGGGAAACACTTCCCAGGACTCGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGt < 1:4181953/146‑1 (MQ=255) gAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGc > 2:3122831/1‑150 (MQ=255) gAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGc > 2:265572/1‑150 (MQ=255) aGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCg > 2:3757590/1‑150 (MQ=255) aGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCg > 2:1440734/1‑150 (MQ=255) gTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATc > 1:3106224/1‑150 (MQ=255) ttCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATcc > 2:3644607/1‑150 (MQ=255) tCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCa > 1:1674248/1‑150 (MQ=255) ttATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACg > 2:96341/1‑150 (MQ=255) aTCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTc < 2:3497557/150‑1 (MQ=255) tCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTcc > 1:2987426/1‑150 (MQ=255) cATGCCTATCCACAAAACGCCCTGGAATTTGCCAGCCGTTTTTTTGTTGGTTTGA‑TTTAAGCCGTAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCca < 1:2447511/150‑1 (MQ=255) aTGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCcac > 1:3075872/1‑150 (MQ=255) aTGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCcac > 1:2131950/1‑150 (MQ=255) tGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCcaca > 2:1161492/1‑150 (MQ=255) tGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCcaca > 2:102349/1‑150 (MQ=255) gCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACaa > 2:778707/1‑150 (MQ=255) gCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACaa > 2:778964/1‑150 (MQ=255) cGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGc > 1:3749391/1‑150 (MQ=255) aTCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCgg > 1:446507/1‑150 (MQ=255) tCCACAAAAAGCCCTGGAATTGGCCAGCCGTTTTTTTTTTGTTTTGA‑TTGACGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGga < 1:3019931/150‑1 (MQ=255) acaAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACACGCGGAGAt > 1:575601/1‑150 (MQ=255) caAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGACGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGAtt < 2:3508868/150‑1 (MQ=255) aaaaaGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTc > 1:3237384/1‑150 (MQ=255) aaaGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTcgc > 1:1090518/1‑150 (MQ=255) gCCCTGGCAATGGCCAGCCGTTTTATTGATGGTATGC‑ATGAAGCGGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCt < 2:2342388/150‑1 (MQ=255) ccccTGCCAATTGCCCGCCGGTTTATTGATGTTAGGC‑CTGACGCCGCAATCAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCt < 2:365153/149‑1 (MQ=255) ctgtaatttGCCCGCGGTTTTTTTGATTGATTGC‑ATGACGCGGTAATCAACACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTaaa < 1:847398/143‑1 (MQ=255) cTGGCATTTGCCTGCGTTTTTTTTGTTGTTTTGC‑ATTACGCGGGATTTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTaaa < 2:63006/150‑1 (MQ=255) cTGGCATTTGCCAGCCGTTTTTTTGTTGGTAGGC‑ATGAAGCCGTAATCAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTaaa < 1:846933/150‑1 (MQ=255) cTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTaaa > 2:3496085/1‑150 (MQ=255) cTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTaaa > 2:1327916/1‑150 (MQ=255) cTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTaaa > 1:955761/1‑150 (MQ=255) cTGGAATTTGCATGCCGTTTTATTTATGTTTTGA‑ATTAAGCCGCAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTaaa < 2:2539851/150‑1 (MQ=255) tGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAg > 1:3753230/1‑150 (MQ=255) tGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAg > 2:3946648/1‑150 (MQ=255) tGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAg > 1:1179346/1‑150 (MQ=255) ggCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGa > 2:2716314/1‑150 (MQ=255) gCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGat > 1:2438238/1‑150 (MQ=255) aaTTGCCCGCGGGTTTTTTGTTGTTATGA‑ATTATGCCGTAATTAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGatat < 2:1211515/150‑1 (MQ=255) gCCTGCGGGTTTATTGTTGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCg < 2:1043722/150‑1 (MQ=255) cAGCGGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGt < 2:3113886/150‑1 (MQ=255) cAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGt > 2:2361298/1‑150 (MQ=255) aGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTc > 2:1827745/1‑150 (MQ=255) aGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTc > 2:82392/1‑150 (MQ=255) aGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTc > 2:1148618/1‑150 (MQ=255) aGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTc > 1:3863256/1‑150 (MQ=255) gCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCt > 1:1473961/1‑150 (MQ=255) gTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAg > 2:1947811/1‑150 (MQ=255) ttATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGtt > 1:292045/1‑150 (MQ=255) ttGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCt > 1:1713762/1‑150 (MQ=255) ttGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCt > 2:2355514/1‑150 (MQ=255) gATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTa > 1:3662048/1‑150 (MQ=255) gATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTa > 2:2178746/1‑150 (MQ=255) | TTGGTTGATGGCCAGCGAAATGATCGCTATGGATATTGATATCAGCTTTGCGCCTGTGCTGGATGTCGGGCATATCAGCGCGGCGATTGGCGAGCGTTCTTATCATGCCGATCCACAAAAAGCCCTGGCAATTGCCAGCCGGTTTATTGATGGTATGC‑ATGAAGCCGGAATGAAAACGACCGGGAAACACTTCCCAGGACACGGTGCAGTAACGGCAGACTCACACAAAGAAACACCGTGCGATCCACGTCCACAAGCGGAGATTCGCGCTAAAGATATGTCGGTCTTCAGTTCCTTA > NC_000913/1164397‑1164694 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |