| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,171,816 | C→G | 5.9% | intergenic (‑89/+17) | gatR ← / ← gatD | pseudogene, repressor for gat operon; interrupted by IS3; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted/galactitol‑1‑phosphate dehydrogenase, Zn‑dependent and NAD(P)‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,171,816 | 0 | C | G | 5.9% | 342.4 / 10.7 | 116 | intergenic (‑89/+17) | gatR/gatD | pseudogene, repressor for gat operon; interrupted by IS3; split galactitol utilization operon repressor, fragment 2; split galactitol utilization operon repressor, interrupted/galactitol‑1‑phosphate dehydrogenase, Zn‑dependent and NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base C (62/46); new base G (4/3); total (67/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.81e-01 | |||||||||||
Only 100 of 121 total aligned reads displayed.
GCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCGG > NC_000913/2171667‑2171965 | gCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGATCGTATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATc < 1:258624/150‑1 (MQ=255) cACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATcc > 2:1882400/1‑149 (MQ=255) gTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTAGCACAATACCGGGCCAGCATCACGCt > 2:1411628/1‑150 (MQ=255) cTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGccc > 1:891436/1‑150 (MQ=255) cTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAAAGATCTGTTTTGCACAAAACAGGGCCAGCATCACGCTGGccc > 2:1407947/1‑150 (MQ=255) tGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCGTGATGCTGGCCcg < 2:1066086/150‑1 (MQ=255) tttcattcaCTAATTGGATGAGCTTATTCCTTCGCTCGAATGAAGTCATCGTCATTTACGCATTTTCAATATTGGCTAGTGTATACGAAGGGGGACCATTGGTGAATGAGCTGTTTTGCACAATACCGGGCCAGCGTGATGCTGGCCcgg < 1:93882/149‑2 (MQ=255) gTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCGTGATGCTGGCCcgg < 2:78604/150‑2 (MQ=255) tgcattcaCTAATTGGATGATCTTATTCCTTCTCTCGAATGAATTCATCGTCATTTTCCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCcgcg < 2:1148216/148‑1 (MQ=255) tcattcaCTAATGGGATGATCTTATTCCTTCGCGAGAATGAATTCATCGCCATTTACCCATATTCAATTGTGGCTCGGGTAAACTACGGGGGACCATTGGTTAATTATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCgg < 2:829672/150‑1 (MQ=255) ttcaCTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGttt < 1:691559/150‑1 (MQ=255) cTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAgg < 1:241749/150‑1 (MQ=255) tAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAggg < 1:1075275/150‑1 (MQ=255) tAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAggg < 2:579948/150‑1 (MQ=255) tGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATg > 1:222138/1‑150 (MQ=255) gatgctCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTACACGAAGGGGGACAATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATgcc > 2:981963/1‑148 (MQ=255) atgatCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGc > 2:598248/1‑150 (MQ=255) tgatCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCa > 2:996719/1‑150 (MQ=255) cTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAa‑cac > 2:1709169/1‑150 (MQ=255) ttATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACt < 2:205240/150‑1 (MQ=255) tCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGc > 2:107152/1‑150 (MQ=255) tCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATa > 1:514219/1‑150 (MQ=255) ggaaggaatTCATCGTCTTTTACCAATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATTATCTGTTTTGCACAATACCGGGCCAGCATCACGCTTGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAg < 2:443756/149‑1 (MQ=255) cGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAg > 2:42682/1‑150 (MQ=255) cGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAg > 1:1356051/1‑150 (MQ=255) aatgaatTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCCGCATCACCCTGGCGCGCGGTTTCAGGGAAAGCGCAACCAATTTG‑CCGGCATAgac > 1:1708384/1‑148 (MQ=255) aatgaatTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCa > 2:1545521/1‑150 (MQ=255) aatgaatTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGAACAAAACCGGGCCAGAAACACGCTTGCCCGCGGTTTCATGGAATGAGCAA‑CACTTTGCCCGGCATAgaa > 1:1702047/1‑148 (MQ=255) atTCATCGTCATTTACCCATCTTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACg < 2:1112651/150‑1 (MQ=255) atTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACg > 1:172738/1‑150 (MQ=255) tCATCGTCATTTACCAATATTCATTTGTGGCTTGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAg < 2:621354/150‑1 (MQ=255) cATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGc > 1:479286/1‑150 (MQ=255) aTCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCAGCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCg < 1:497510/150‑1 (MQ=255) cGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑AACTTTGCACGGCATAGCATTACGAGCGAt > 1:788823/1‑150 (MQ=255) gTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATg > 2:154556/1‑150 (MQ=255) tCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGt < 2:37241/150‑1 (MQ=255) cATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTc > 2:1061940/1‑150 (MQ=255) cATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGAAGTc > 2:470369/1‑150 (MQ=255) tttACCTATATTCATTTTTGGATTTTTTAAACTTAGGGGTACCTTTGGTTAATGTTCTGTTTTGCACATTACCGGGCCAGCTCCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCAc < 2:639511/150‑1 (MQ=255) tttACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCAc < 1:1337417/150‑1 (MQ=255) cccATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTGTAAGGGAATGAGCAA‑CCCTTTGCCCGGCATAGCATTACGAGCGATGgcacgcac > 2:1414377/1‑150 (MQ=255) ccATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCACGCGGTTTCAGGGTATGAGCAA‑CACTTTGCCCGGCATCGCATTACGAGCGATGTCACGCAcc > 1:298381/1‑150 (MQ=255) cATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCg > 2:1682751/1‑150 (MQ=255) ttttCAATTTTGGGTAGTGTAAACGAAGGGGTACCATTGGTGAATGATCTGTTTTGCACAATACCGGCCCAGCATCACGCGGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGcc < 1:1532688/148‑1 (MQ=255) ttCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTTGTGAATGATCTGTTTTGCAAAATACCGGGCCAGCATCACTCTGGCCCGCGGTTTCAGGTAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTg < 2:1260483/150‑1 (MQ=255) tCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCCCGCACCGCCTgg > 2:582666/1‑150 (MQ=255) cAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGCGCAA‑CACTTTGCCCGGCCTAGCATTACGCGCGATGTCACGCACCGCCTggg > 2:324037/1‑150 (MQ=255) cAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCTA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTggg < 2:1308649/150‑1 (MQ=255) cAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTggg > 2:1071902/1‑150 (MQ=255) cAATTGTGGCAAGGGTAAACGAAGGGGGCCCATGGGGGAATGATCGGTTTTGCACAATACCGGGCCAGCATCACGCGGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTggg < 1:340065/150‑1 (MQ=255) aaTTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGc > 1:1767746/1‑150 (MQ=255) tgaggCTAGTGTAAACGAAGGGGGACCATTGCTGAATGAACTGATTTTCTCAATACCGGGCAAGCATACCGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTATCCCCGCCAAACCAATACGAGCGATGTCACGCCCCGCCTGGGCGaa > 1:907292/4‑150 (MQ=255) gtgGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAg > 1:950300/1‑150 (MQ=255) ggCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCCCGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCCCCGCCTGCGCGCAGCt > 2:307713/1‑150 (MQ=255) gCTCGTGTAAACGAAGGGGGACCATTGGGGAATGAGCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCtt < 2:482584/150‑1 (MQ=255) attgtAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGATTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCa < 1:1027475/148‑1 (MQ=255) aGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCa < 1:107152/150‑1 (MQ=255) gtgtAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCATTCaa > 2:1383948/1‑150 (MQ=255) tgtAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCaaa > 1:1251547/1‑150 (MQ=255) gtAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAg < 2:1369792/150‑1 (MQ=255) aaaCGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGAATTACGAGCGATTTCACGCACCGCCTGGGCGAAGCTTTCAAAGCt > 1:748072/1‑150 (MQ=255) aaCGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCtt > 1:217840/1‑150 (MQ=255) aaGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCAc > 2:779882/1‑150 (MQ=255) gACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAg < 2:1187552/150‑1 (MQ=255) aCCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGc < 2:1009040/150‑1 (MQ=255) ccATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCg > 1:1360402/1‑150 (MQ=255) cATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGa > 2:1218494/1‑150 (MQ=255) ttGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGAtt < 1:154556/150‑1 (MQ=255) gAATGATCTGTTTTGCACAATACCGGGCCAGCATGACGCAGGCCCGCGGTTTCAGGGAATGACCAA‑CACTTTGCCCGGCATAGCATTACCAGCGATGTCACGCACCGCCTTGGCGAACCTTTCTAACCTGCCACGGTGAGCGATTAATgg > 2:471320/1‑150 (MQ=255) aaTGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTATCCCGGCATAGCATTACGAGCGATGACACGAACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGc > 2:1774222/1‑150 (MQ=255) aTGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCt > 1:424501/1‑150 (MQ=255) tGATCTGTTTTGCACAATACCGGGCCAGCATCCCGCTGGCCCGCGGTTTCAGGGAATGAGCAG‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTc > 2:1176598/1‑150 (MQ=255) tGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTc > 2:957401/1‑150 (MQ=255) gATCTGTTTTGCACAACACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTcc > 1:914298/1‑150 (MQ=255) aTCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCa > 2:127595/1‑150 (MQ=255) aTCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGGTTGAGGGAATTGGCAA‑CACGTTGACCGGAATAGGTTTTAGCGCGATGTAACGCACCGCCTGGGCGCAGGTTTCAAAGCTTGCCCGGTGAGGGGTTAAgggggccc > 2:1725080/1‑145 (MQ=255) gTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCt > 1:529618/1‑150 (MQ=255) ttttGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCtt < 1:803599/150‑1 (MQ=255) tttGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCGTTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTa > 1:1449806/1‑150 (MQ=255) gCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGTCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACt < 1:763856/150‑1 (MQ=255) gCACAATACCGGGCCAGCATCACGCTGGCCCGCGGGTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTTCGAGCGATGTCCCGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATGATTGGCTCCAGGCTTAACt > 2:689865/1‑150 (MQ=255) cacaATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACtt < 2:222138/150‑1 (MQ=255) caATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTAc > 1:1316395/1‑150 (MQ=255) caATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACGTAc > 1:139103/1‑150 (MQ=255) aaTCCCGGGCCAGCATCCCGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACg < 1:1413017/150‑1 (MQ=255) ccgcGGGCCAGCGTGATGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGCTGTCCCGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGCTTAATGGCTCCAGGCTTAACTTACGtt > 1:1128408/4‑150 (MQ=255) gcGGGCCAGCGTGATGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCGTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCt > 1:339654/2‑150 (MQ=255) cGGGCCAGCGTGATGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGCGCGATTAATGGCTCCAGGCTTATCTTACGTTCTg > 1:973577/1‑150 (MQ=255) cGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTGTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTg < 2:976384/150‑1 (MQ=255) gCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCa < 1:894852/150‑1 (MQ=255) gCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGATTCCACGGTGAGCGATTAATGGCTCCAGGCTTACCTTACGTTCTGTCa > 2:251440/1‑150 (MQ=255) ccccgcagcaCGCGGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCGCCAGGCTTAACTTACGTTCTGTCa < 2:1171162/146‑1 (MQ=255) ccAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAg < 2:650333/150‑1 (MQ=255) ccAGCATCACGCTGGCCCGCGGGTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAg < 1:1692033/150‑1 (MQ=255) cAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTTAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGc < 2:320232/150‑1 (MQ=255) cATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCACAGCATCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGGTCTGTCAGCAAc > 1:1679695/1‑150 (MQ=255) aTCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAAcc < 1:1010318/150‑1 (MQ=255) tCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCg > 1:1609709/1‑150 (MQ=255) cACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCgg > 2:1014503/1‑150 (MQ=255) cACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCgg > 2:1007932/1‑150 (MQ=255) | GCACGGTTCCCTGTTCATTCACTAATTGGATGATCTTATTCCTTCGCTCGAATGAATTCATCGTCATTTACCCATATTCAATTGTGGCTAGTGTAAACGAAGGGGGACCATTGGTGAATGATCTGTTTTGCACAATACCGGGCCAGCATCACGCTGGCCCGCGGTTTCAGGGAATGAGCAA‑CACTTTGCCCGGCATAGCATTACGAGCGATGTCACGCACCGCCTGGGCGAAGCTTTCAAAGCTTCCACGGTGAGCGATTAATGGCTCCAGGCTTAACTTACGTTCTGTCAGCAACCGG > NC_000913/2171667‑2171965 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |