| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,113,368 | T→A | 5.1% | intergenic (‑307/+66) | rfbB ← / ← wcaN | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding/putative regulatory subunit for GalU |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,113,368 | 0 | T | A | 5.1% | 425.0 / 7.2 | 135 | intergenic (‑307/+66) | rfbB/wcaN | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding/putative regulatory subunit for GalU |
| Reads supporting (aligned to +/- strand): ref base T (60/68); new base A (2/5); total (62/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
Only 100 of 141 total aligned reads displayed.
CCCGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCAGGTTGCGTAGGCCATACTTCACAAACGCCTG > NC_000913/2113220‑2113517 | cccGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACtt > 2:1652316/1‑150 (MQ=255) ccGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACttt > 1:1532204/1‑150 (MQ=255) cGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACtttt > 1:764794/1‑150 (MQ=255) cGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACtttt < 1:2052353/150‑1 (MQ=255) aaaaaaTCAAACGCTAATTGTCTTAACAATCCGCGCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAATACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTtgc < 2:339584/150‑1 (MQ=255) aaaaaTTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTtgc < 2:2097047/150‑1 (MQ=255) aaaaTTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTtgct > 2:1826277/1‑150 (MQ=255) aTTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCg > 2:1790502/1‑150 (MQ=255) aaaCGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGTAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAAtt < 1:1412500/150‑1 (MQ=255) cGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTc < 1:1532156/150‑1 (MQ=255) gCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCGAATCTTcc < 2:1725055/150‑2 (MQ=38) aaTTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTCATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTAGCTGCGAATTTTCACTg > 2:299270/1‑150 (MQ=255) aTTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTcctgc < 1:2025949/150‑5 (MQ=25) aTTGTCTTAACAATCCGCTCTGGAAACAAGGATAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAACTTCGCAGCAAAAGTAATTTGTTGCGAATCTTcctgc < 1:317746/150‑5 (MQ=25) ttGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTC‑CTGcc < 2:2208256/150‑1 (MQ=25) ttGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGcc < 1:1913735/150‑1 (MQ=255) tGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTC‑CTGCCg < 2:878492/150‑1 (MQ=25) tGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCg > 2:480438/1‑150 (MQ=255) tGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCg > 2:1033497/1‑150 (MQ=255) tGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCg > 1:69719/1‑150 (MQ=255) ccAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAAt > 1:1670446/1‑150 (MQ=255) ccAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAAt > 1:456957/1‑150 (MQ=255) aaTCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAAttt > 1:2113166/1‑150 (MQ=255) cGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCtt < 2:719972/150‑1 (MQ=255) gCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTa < 2:1003629/150‑1 (MQ=255) gCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTa < 1:805525/150‑1 (MQ=255) aagcAAGGAAAATCCTGGAAAACATTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACTGCAG‑GAAGATTCTCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCg < 1:109450/147‑1 (MQ=255) aaaCAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCg < 1:1857242/150‑1 (MQ=255) aaaCAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCg < 1:488670/150‑1 (MQ=255) aCAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGtt < 2:497386/150‑1 (MQ=255) cAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTa < 1:906498/150‑1 (MQ=255) cAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTa > 1:1056720/1‑150 (MQ=255) aaaGGAAAATCCTTGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTa < 2:491441/149‑1 (MQ=255) ggAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACAt > 1:1719949/1‑150 (MQ=255) ggAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACAt > 1:447781/1‑150 (MQ=255) aaTCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCgg < 1:517368/150‑1 (MQ=255) aTCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGt < 2:878206/150‑1 (MQ=255) tCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTc > 2:437898/1‑150 (MQ=255) cTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTctg > 2:2021710/1‑148 (MQ=255) ggAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCTGAt > 2:532289/1‑150 (MQ=255) ggAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGAt > 1:2063449/1‑150 (MQ=255) aaaaCTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGAttt > 1:1779475/1‑150 (MQ=255) aaaaCTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATAAACCGTTACATCCGGTCAGAttt > 2:204083/1‑150 (MQ=255) aaCTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTc < 2:764794/150‑1 (MQ=255) aCTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCa < 2:1803621/150‑1 (MQ=255) aCTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCa > 1:1466060/1‑150 (MQ=255) cTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCat > 2:955164/1‑150 (MQ=255) atttGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCat < 1:2028069/149‑1 (MQ=255) tttGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCatt > 1:535069/1‑150 (MQ=255) ttGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCatta > 2:1082056/1‑150 (MQ=255) tAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCAGGTCAGATTTTCATTATTCGc > 2:253565/1‑150 (MQ=255) aaacCCCCACTCCTAACTCCTTGTTATTCTGATGGTCTATATAAAACAACGGCAG‑GAAGAATCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCt < 2:1466060/150‑1 (MQ=255) aaaaCCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCt < 2:398907/150‑1 (MQ=255) aaaaCCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCt < 2:1425017/150‑1 (MQ=255) aaaaCCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGGTACATCCGGTCAGATTTTCATTATTCGCt < 2:15951/150‑1 (MQ=255) aaCCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTa < 1:1826277/150‑1 (MQ=255) aaCCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTa < 2:1189641/150‑1 (MQ=255) ccTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACa < 2:1577351/150‑1 (MQ=255) cTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCTGTCAGATTTTCATTATTCGCTTAACAGCtt > 1:100810/1‑150 (MQ=255) gCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTtct > 1:848167/1‑150 (MQ=255) gCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTtct > 1:1465092/1‑150 (MQ=255) gCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATAAACCGTTACATACGGTCAGATTTTCATTATTCGCTTAACAGCTtct > 1:1988222/1‑150 (MQ=255) tAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCa < 1:1533472/150‑1 (MQ=255) tAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCa < 1:1239167/150‑1 (MQ=255) tAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCa < 1:1033497/150‑1 (MQ=255) tAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCa < 1:382572/150‑1 (MQ=255) aCTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAAt > 2:616994/1‑150 (MQ=255) cTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATa > 1:652357/1‑150 (MQ=255) tCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATAc < 2:2121996/150‑1 (MQ=255) tCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATAc < 1:1678719/150‑1 (MQ=255) cGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATAcc < 1:621692/150‑1 (MQ=255) gttATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTa > 1:1012077/1‑150 (MQ=255) aTTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACgg < 1:1719576/150‑1 (MQ=255) ttCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAAATACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGAGTTTCAGTATTCGCTTAACAGCTTCTCATTACCTTTACGGa > 2:620497/1‑150 (MQ=255) cTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAAc > 2:1862002/1‑150 (MQ=255) tGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTAc > 2:654481/1‑144 (MQ=255) tGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTAc < 1:654481/144‑1 (MQ=255) aTGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTc < 1:1249617/150‑1 (MQ=255) aTGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTc > 2:2171468/1‑150 (MQ=255) tGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCg > 2:352719/1‑150 (MQ=255) gTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGcc < 2:1454662/150‑1 (MQ=255) ttttTATAAAACAACGGAAG‑GAAGATTCGAAAGATTTTACTTTTGCTGCGAATTTTAACTGCAGTTATAATTTTCTTATCAACCGTTACATCCGTTCAGATTTTCATTATTCGCTTAACAGCTTGTCAATACCTTTAGGGATCttatccc < 2:1424474/150‑6 (MQ=255) tataAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCcttg > 1:1707418/1‑149 (MQ=255) tataAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCcttc > 1:695871/1‑150 (MQ=255) ataAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCcttct < 1:1790502/150‑1 (MQ=255) ataAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCcttct > 2:1967223/1‑150 (MQ=255) taAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGATTTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGACCcttctt > 1:211660/1‑150 (MQ=255) taAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAAGAGCTTCTCAATACCTTTACGGAACTTCGCCCcttctt > 2:624426/1‑150 (MQ=255) taAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCcttctt > 2:680259/1‑150 (MQ=255) aaaaCAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCttt < 1:2071060/150‑1 (MQ=255) aaaCAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTc > 1:629909/1‑150 (MQ=255) aaaCAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTc > 2:1756516/1‑150 (MQ=255) tataacGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTC‑CTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCa > 2:1230330/4‑150 (MQ=21) ctg‑gAAGATTCTCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCAGGTTGCGt < 1:299270/148‑1 (MQ=255) cAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCTTTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCAGGTTGCGt < 2:1599319/150‑1 (MQ=255) aaGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCAGGTTGCGTAGGc > 2:972621/1‑150 (MQ=255) aGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCAGGTTGCGTAGGcc < 2:1206678/150‑1 (MQ=255) cGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCAGGTTGCGTAGGCCATACt > 1:1900151/1‑150 (MQ=255) ttACTTTTGCTGCGAATTTTCAATGCAGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCAGGTTGCGTAGGCCATACTTCACAAACg < 2:2073597/150‑1 (MQ=255) tACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCAGGTTGCGTAGGCCATACTTCACAAACGc < 2:1056720/150‑1 (MQ=255) | CCCGAAAAATTCAAACGCTAATTGTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAACAAATTACTTTTGCTGCGAATTTTCACTGCCGTTATAATTTTCTTATCAACCGTTACATCCGGTCAGATTTTCATTATTCGCTTAACAGCTTCTCAATACCTTTACGGAACTTCGCCCCTTCTTTCAGGTTGCGTAGGCCATACTTCACAAACGCCTG > NC_000913/2113220‑2113517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |