| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,424,646 | C→A | 5.2% | noncoding (2138/2904 nt) | rrlD ← | 23S ribosomal RNA of rrnD operon |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,424,646 | 0 | C | A | 5.2% | 310.3 / 2.1 | 129 | noncoding (2138/2904 nt) | rrlD | 23S ribosomal RNA of rrnD operon |
| Reads supporting (aligned to +/- strand): ref base C (71/48); new base A (2/5); total (73/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.30e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 133 total aligned reads displayed.
CCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC > NC_000913/3424504‑3424795 | cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa > 2:1054498/1‑150 (MQ=31)cctccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACACGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa > 2:480567/1‑150 (MQ=14) tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCCACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCCCGGTCGGCTCCATGCAGCCTGGCGTCCCAACTTCTAA‑g > 2:143905/1‑150 (MQ=11) tccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTAACCACCAGACACTGTCCGCAACCCGGAATACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACATCTAA‑g > 2:458628/1‑150 (MQ=12) ccGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGATCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑Gc < 1:2113360/150‑1 (MQ=17) cGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑Gcc > 2:1595100/1‑150 (MQ=32) gTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCt > 1:826693/1‑150 (MQ=32) aCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTccc < 1:1883741/150‑1 (MQ=32) aCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTccc < 1:1218844/150‑1 (MQ=32) aCTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTccc > 2:1994702/1‑150 (MQ=32) ctctTTAGGAGGAGACCGCCCGAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCa < 1:256034/150‑1 (MQ=17) ctctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCa < 2:1101706/150‑1 (MQ=32) ttcagggaggaGACCGCCCCAGTCAAACTACCCACCAGCCACTGTCCGCAACCCGGATTACGGGTCAACGTTATAACATCAAACATTAAAGGGTGGTATTTCAATGTCGGCTCCATGCAGACTGGCGTCCACACATCTAA‑GCCTCCCAcc > 2:184196/6‑150 (MQ=11) ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGTGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAcc < 2:1314269/150‑1 (MQ=17) ctTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCAcc < 2:1665223/150‑1 (MQ=32) aggaggAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGCTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTaaa > 1:1246446/1‑148 (MQ=17) ggaggaGACCGTCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCCCCGATcc > 2:1921692/1‑150 (MQ=12) ggaggaGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATcc > 1:1321776/1‑150 (MQ=32) ggagACCGCCCCAGCCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTac < 2:1359873/150‑1 (MQ=17) gagaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTaca < 1:1307429/150‑1 (MQ=32) gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTAcaca > 2:1648387/1‑150 (MQ=32) gaCCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTAcaca > 1:2018672/1‑150 (MQ=32) cGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGCGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCa > 1:1897157/1‑150 (MQ=17) gCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCACACAGTAAAGGGTGGTATTTCTAGGTCGGCTCCATGCAGAATGCCGTCCACACTTCTAA‑GCCGCCCAAATATCCTACACATCaa > 2:1338105/1‑150 (MQ=11) gCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACGCATCaa > 1:1433878/1‑150 (MQ=17) ccccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAg > 2:1085618/1‑150 (MQ=32) cccAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAgg < 1:633907/150‑1 (MQ=32) aGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACATCTAA‑GCCTCCCACCTATCCTACACAACAACGCTc > 2:424458/1‑150 (MQ=12) aGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACAGCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACCCTTCTAA‑GCCTCCCACCTATCCTACCCATCAAGGCTc > 1:554028/1‑150 (MQ=12) gTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCa < 1:1994702/150‑1 (MQ=32) aaaCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGTGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATg < 1:940112/150‑1 (MQ=17) aaaCTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATg < 1:940116/150‑1 (MQ=32) cTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc < 1:1842146/150‑1 (MQ=32) cTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc > 2:1732670/1‑150 (MQ=32) aCCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCCCCTATCCTACCCATCAAGGCTCAATGTTCAg > 1:1012426/1‑150 (MQ=17) cccAGCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTTGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt < 1:1689291/150‑1 (MQ=17) ccaccaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtg > 2:772995/1‑150 (MQ=32) accaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCCTGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTc > 1:1817574/1‑150 (MQ=17) accaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTTCACACTTCTAA‑GCCTCCCACCTTTGCTACACATCAAGGCTCAATGTTCAGTGTc < 2:876179/150‑1 (MQ=12) accaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTc > 1:661651/1‑150 (MQ=32) accaGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGCCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTc < 1:842108/150‑1 (MQ=17) acacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCt > 1:2143976/1‑150 (MQ=32) acTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtat > 2:210373/1‑150 (MQ=32) acTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtat > 1:1343761/1‑150 (MQ=32) tGTCCGCAACCCGGATTACGGGTCAACGTTGGAACATCAAACATTAAAGGGTGGTATTTTAAGGTCGTATTAAT‑TATTTTTTTTTTTTTAATTTTAATGCGTCCAACGTTTTCTACACATTAAGGCTCAATGTTCAGTGTCAAGCTATAg < 2:306141/150‑1 (MQ=0) gTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGt > 1:1124173/1‑150 (MQ=32) tCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGCGGCGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTa < 1:375979/150‑1 (MQ=12) ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTaa > 2:1291636/1‑150 (MQ=32) ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTaa > 1:670627/1‑150 (MQ=32) aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCAAACTTCTAA‑GCCTCACACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGt > 1:1414387/1‑150 (MQ=17) gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTc > 2:1359766/1‑150 (MQ=32) gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTc < 1:454118/150‑1 (MQ=32) tCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTcc > 2:1216798/1‑150 (MQ=32) tCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTcc > 2:1456151/1‑150 (MQ=32) aCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTc < 1:1239948/150‑1 (MQ=32) cGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCt < 1:2109979/150‑1 (MQ=32) ttAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGTCTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGATCAATTTTCAGTGTCAAGCTATAGTAAAGGTTCAAGGGTTCTTTCCTTCTTg > 2:1187171/1‑150 (MQ=11) ttAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTg < 1:424458/150‑1 (MQ=32) aGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGcc > 2:708611/1‑150 (MQ=32) aGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGcc < 1:2018598/150‑1 (MQ=32) gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCcg > 1:1871691/1‑150 (MQ=32) aCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCcgcg > 2:1215928/1‑150 (MQ=32) cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCgg > 2:215752/1‑150 (MQ=32) aTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATTCAGA‑TTTTTTTTTTATTGTTAATGCGTCCAACGATTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCggg < 2:1528986/150‑1 (MQ=0) cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTa > 1:1187879/1‑150 (MQ=32) cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTa > 2:101646/1‑150 (MQ=32) cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGAGGTTa > 2:1540534/1‑150 (MQ=17) aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTac > 2:2174330/1‑150 (MQ=32) cATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCTGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACt < 2:569686/150‑1 (MQ=17) ttAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGGCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGc < 1:593345/150‑1 (MQ=17) tAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGTATTCCACAATTCTAA‑GCGTCCAACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCa < 2:1730220/150‑1 (MQ=11) tAAAGGGTCGTATTTCAAGGTCGGCTCCATGCATACTTGTTTTTAAAATTTTAT‑GCGTCCAACGTTTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCa < 2:1096579/150‑1 (MQ=11) aaaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCAt > 2:1586464/1‑150 (MQ=32) aGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCt < 1:1648387/150‑1 (MQ=32) gggTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCtt > 2:1417008/1‑150 (MQ=32) gggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTcac < 1:1254916/149‑1 (MQ=17) ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTcaca < 1:1437797/150‑1 (MQ=32) ggtATTTCAAGGTCGGATCCATGCCGACTGTCGTCCACACTTCTAA‑GCATCCCACCTATAATACACAAAAAGGCTCAATGTTCAGTGTCAAGCTATAGTTAAGGTTCCCGGGGTCTTTCAGTCTTTCCGCGGGTACACTGCATCTTcaca > 2:2062297/1‑150 (MQ=11) ggtATATCAAGGTCGGCTCCATGCAG‑TTTGTTTTTATAATTTTAATGCGTCCAACGTTATCTACACATAAAGGCTCTATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTcaca < 2:424510/150‑1 (MQ=0) tATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGc > 1:965214/1‑150 (MQ=32) aTTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑TCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCg < 2:829612/150‑1 (MQ=17) aTTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCg < 1:101646/150‑1 (MQ=32) ttCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAg < 1:708611/150‑1 (MQ=32) cAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTCCACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAggg > 1:1103307/1‑148 (MQ=17) cAAGGTCGGCTCCATGCAGAATGGTTTTTAAATTTTTAA‑GCGTCCAACGTTTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGtt < 2:2057007/150‑1 (MQ=11) aGGTCGGCTCCATGCAGACTTTTTTTTAAATTTTTAT‑GCGTCCAACGTTTTCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCa < 2:704920/150‑1 (MQ=11) gTCGGCTCCATGCAGACTGGCGTCCACACTTCTTA‑GCCTCCCACCTATCCTACAACTCCAGGCTCAATGTTCAGTGTCAATCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAAt < 1:208408/150‑1 (MQ=11) gTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAAt > 2:211792/1‑150 (MQ=32) ggCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGTCTCAATGTTCAGTGTCAAGCTGTAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCAGCGGGGACACTGCATCTTCACAGCGAGTTCAAttta > 2:275561/1‑149 (MQ=255) ggCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCACACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTc < 2:1124173/150‑1 (MQ=17) cTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCAc > 1:2082737/1‑150 (MQ=32) tGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGt < 1:1054498/150‑1 (MQ=32) ggCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTg > 2:1623864/1‑150 (MQ=32) gTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCg < 1:2055244/143‑1 (MQ=32) gTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCg > 2:2055244/1‑143 (MQ=32) gTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGgag > 1:1779276/1‑150 (MQ=32) tCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGgaga > 2:665128/1‑150 (MQ=32) tCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGgaga < 1:1590112/150‑1 (MQ=32) cacTTCTAT‑GCCTCCCACCTATACTACACATCAAGGCTCAATGTTGAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGGGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGc < 2:347017/150‑1 (MQ=255) cacTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCGATAGTAAAGGTGCACGGGGTCGTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGGTCTATTTCACTGAGTCTCGGGTGgagcctgc > 2:127727/1‑145 (MQ=11) | CCTCCGTTACTCTTTAGGAGGAGACCGCCCCAGTCAAACTACCCACCAGACACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAA‑GCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCGCGGGTACACTGCATCTTCACAGCGAGTTCAATTTCACTGAGTCTCGGGTGGAGACAGC > NC_000913/3424504‑3424795 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |