| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,636,008 | G→T | 5.0% | intergenic (+115/+200) | yhiM → / ← yhiN | acid resistance protein, inner membrane/putative oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,636,008 | 0 | G | T | 5.0% | 397.6 / 6.1 | 130 | intergenic (+115/+200) | yhiM/yhiN | acid resistance protein, inner membrane/putative oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base G (52/69); new base T (5/3); total (58/72) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 132 total aligned reads displayed.
TTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATC > NC_000913/3635859‑3636153 | tttCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCCGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGGATGATGATATAACGCCGCATTTATGCATAGTGGTTAAGTATAAAAAACCGCAAAg > 2:227348/1‑150 (MQ=255)tttCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAg < 1:1590839/150‑1 (MQ=255) tCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGtt < 2:1281980/150‑1 (MQ=255) tCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGtt < 1:1606589/150‑1 (MQ=255) cAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACTCTGTTTTTTCTTAGGCATCATTAAATAACGCAGAATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAATTTa > 2:1326399/1‑150 (MQ=255) atatTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACAATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACt > 1:787441/1‑150 (MQ=255) tAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑ttt > 1:615236/1‑150 (MQ=255) gtaGCGGGTTCTGCTAAAAAATAATTTCAACGTAACGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTATGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑ttttt < 2:825648/148‑1 (MQ=255) gAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑ttttt > 2:1705836/1‑150 (MQ=255) aGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGTAACTTTGCTG‑tttttta < 1:188510/150‑2 (MQ=255) gTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAAcc < 1:1823604/150‑1 (MQ=255) gCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTc > 1:728174/1‑150 (MQ=255) gCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTc > 2:2081068/1‑150 (MQ=255) cTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGAATCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTATCAACCTGTTCa > 2:1105773/1‑150 (MQ=255) aaaaaTAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCatat > 2:1381271/1‑150 (MQ=255) aataatTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTc > 1:1674347/1‑150 (MQ=255) ataatTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCa < 1:1838015/150‑1 (MQ=255) ataatTGCAACGTACAGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCTTAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCa < 1:1367799/150‑1 (MQ=255) aatTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATa < 1:1704223/150‑1 (MQ=255) aatTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATa < 1:134203/150‑1 (MQ=255) atTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATaa < 2:1013363/150‑1 (MQ=255) cAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGAt > 1:2204959/1‑150 (MQ=255) aaCGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATc < 1:1960740/150‑1 (MQ=255) aaCGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATc < 1:650198/150‑1 (MQ=255) aaCGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATc < 1:903403/150‑1 (MQ=255) tACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGc > 1:164551/1‑150 (MQ=255) tACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTAATAAAGATCTGGc > 1:2214395/1‑150 (MQ=255) ccGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCa > 1:721369/1‑150 (MQ=255) cGGATAAAACCAGCGTTGACCATTTGCGTATCGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCAc < 2:1689873/150‑1 (MQ=255) cGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCAc < 1:893344/150‑1 (MQ=255) ggATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACt > 1:687268/1‑150 (MQ=255) ggATAAAACCAGAGTTGACCATTTGCGTAACTCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACt < 2:180813/150‑1 (MQ=255) aaaaCCAGCGCTGACCATTTGCGTAACGCTGGTTTTTCTTAGTCATCATTAAATTACGCAGCATTAATGCATAGTGTTTAAGTATCAAACACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACtgagt < 2:1141215/150‑1 (MQ=255) aaaCCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACtgagtg > 1:64529/1‑150 (MQ=255) aaaCCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACtgagtg > 1:1056739/1‑150 (MQ=255) aCCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACtgagtgag > 2:947892/1‑150 (MQ=255) aGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGttt < 2:685956/150‑1 (MQ=255) aGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGttt < 2:120187/150‑1 (MQ=255) tttGAACATTTGAGTAACGCTGGTTTTTATTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGTCCACTGAGTGAGTTTTCa < 2:212532/149‑1 (MQ=255) gTTGACCTTTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCa < 1:833437/150‑1 (MQ=255) gTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCa < 2:205621/150‑1 (MQ=255) tGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTAATAAAGATCTGTCCACTGAGTGAGTTTTCAAt > 1:1561314/1‑150 (MQ=255) gACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATc < 2:915380/150‑1 (MQ=255) gACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATc < 2:964757/150‑1 (MQ=255) tGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTTGTTAAGTATAAAAAACAGCAAATTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGGTTTCAATCACCTTtc < 2:1504555/150‑1 (MQ=255) tGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTtc < 1:2121232/150‑1 (MQ=255) tGGTTTTTCTTAGGCATCATGAAATTACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAACGGTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCtt < 1:130913/150‑1 (MQ=255) ggTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTGTTTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGACACTGAGTGAGTTTTCAATCACCTTTCCATCAACCtt > 1:1868245/1‑150 (MQ=255) ggTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTta > 1:1105102/1‑150 (MQ=255) ttAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGc < 1:1453162/150‑1 (MQ=255) ttAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGc < 2:2084752/150‑1 (MQ=255) ttAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGc < 2:1389271/150‑1 (MQ=255) tAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCa > 1:531404/1‑150 (MQ=255) tAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCa < 2:687268/150‑1 (MQ=255) ggCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATg < 2:2038530/150‑1 (MQ=255) ggCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATg < 1:1705836/150‑1 (MQ=255) gCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATgg < 1:2081068/150‑1 (MQ=255) atcatGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAg < 1:516340/150‑1 (MQ=255) atcatGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAg > 1:313925/1‑150 (MQ=255) atGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGt > 2:2193190/1‑150 (MQ=255) atGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCAATCCACCTTATATTAAGCATGGAGGGt > 1:1561155/1‑150 (MQ=255) tGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGtt > 2:1099227/1‑150 (MQ=255) tGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGtt > 2:1855045/1‑150 (MQ=255) tGAAATAACGCAGCATTAATGAATAGTGGTTAAGTAAAAAATACAGAAAACTTACTG‑TATTTTTCAAACTGTTCATATTTCATAAAGATCTGTCCACAGACTGAGTTTTCAATCACCTTTCCAACCACCTTATATTAACCAATGAgggat > 1:2179057/1‑148 (MQ=255) aaaTAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTc < 2:654820/150‑1 (MQ=255) aaaTAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTc > 1:933236/1‑150 (MQ=255) aaTAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCa > 1:1241652/1‑150 (MQ=255) aaCGCATCATTAATGCATAGTGGTTAAGTATAAAAAACATCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCATTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGtt < 1:375443/150‑1 (MQ=255) cGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCa > 2:1432610/1‑150 (MQ=255) gcagcaTTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCAc < 1:1918111/150‑1 (MQ=255) aagaaTTAATGCATATTGGTTAATTATAAAAAACAGCAAATTTACTG‑TTTTTTTCAACCTGTTAATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTAAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACg < 1:30213/146‑1 (MQ=255) gcaTTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACggg > 1:883869/1‑150 (MQ=255) caTTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGc < 2:1838940/150‑1 (MQ=255) aTGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCAtt < 1:1045867/150‑1 (MQ=255) aTGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTGTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCAtt < 2:2006017/150‑1 (MQ=255) tGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTa < 1:339643/150‑1 (MQ=255) tGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTa < 2:1056739/150‑1 (MQ=255) gCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGTAGGGTTTCAGTTCACGGGATCATTat > 2:208694/1‑149 (MQ=255) ggTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAaataa > 2:1601751/1‑150 (MQ=255) ttAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATATCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATc < 1:1066521/150‑1 (MQ=255) tAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTTAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATca < 1:1381271/150‑1 (MQ=255) ggttgaaaaaaaCAGTAACTTTGCTG‑TTTTTTTCAACATGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCAACTTATATTAAGAATGGAGGGTTTCAGTTCACGGTCTCATTAGAAAATAATcaa > 2:1479745/7‑149 (MQ=255) gttgaaaaaaaCAGTAACTTTGCTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATcaca > 1:1452360/6‑150 (MQ=255) aGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATcaca < 2:1674347/150‑1 (MQ=255) aGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATcaca < 1:1306907/150‑1 (MQ=255) ttgaaaaaaaCAGTAACTTTGCTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACaa > 1:1749606/5‑150 (MQ=255) gTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACaa > 2:788503/1‑150 (MQ=255) gTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGGTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACaa < 2:1637568/150‑1 (MQ=255) tataAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAg < 2:1496193/150‑1 (MQ=255) tataAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTAAATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAg < 1:1461499/150‑1 (MQ=255) tataAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAAACACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAg > 2:1047738/1‑150 (MQ=255) taAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGAt < 2:443129/150‑1 (MQ=255) taAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGAt > 2:740940/1‑150 (MQ=255) aaaaaaaCAGTAACTTTGCTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGAt > 2:1902121/2‑150 (MQ=255) aaaaaaCAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATa > 2:346778/1‑150 (MQ=255) aaaaaaCAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATa > 2:1586553/1‑150 (MQ=255) aaaaaCAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATaa > 1:745539/1‑150 (MQ=255) aCAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCAc < 2:494078/150‑1 (MQ=255) gCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTAt < 1:1586553/150‑1 (MQ=255) cAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATc < 1:240422/150‑1 (MQ=255) | TTTCAATATTAGAAGCGGGTTCTGCTAAAAAATAATTGCAACGTACCGGATAAAACCAGCGTTGACCATTTGCGTAACGCTGGTTTTTCTTAGGCATCATGAAATAACGCAGCATTAATGCATAGTGGTTAAGTATAAAAAACAGCAAAGTTACTG‑TTTTTTTCAACCTGTTCATATTTCATAAAGATCTGGCCACTGAGTGAGTTTTCAATCACCTTTCCATCCACCTTATATTAAGCATGGAGGGTTTCAGTTCACGGGCTCATTAGAAAATAATCACAAGATAACCACTATC > NC_000913/3635859‑3636153 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |