| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,400,324 | Δ1 bp | 6.3% | coding (37/309 nt) | hfq → | global sRNA chaperone; HF‑I, host factor for RNA phage Q beta replication |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,400,324 | 0 | A | . | 6.3% | 425.1 / 21.3 | 143 | coding (37/309 nt) | hfq | global sRNA chaperone; HF‑I, host factor for RNA phage Q beta replication |
| Reads supporting (aligned to +/- strand): ref base A (60/73); new base . (4/5); total (65/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.99e-01 | |||||||||||
Only 100 of 144 total aligned reads displayed.
ACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTCTACTGT > NC_000913/4400175‑4400472 | aGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAAc < 2:505807/150‑1 (MQ=255) ggTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACg > 1:1147283/1‑150 (MQ=255) ggTGCTATCGCAGGATGAATGTGTACAATTGAGACGTATCGTTCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCg < 1:1631151/150‑1 (MQ=255) gTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑t > 1:1321911/1‑150 (MQ=255) tATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCggg < 2:688132/150‑1 (MQ=255) tCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCCG‑ACGCAGTGCG‑ttcaggaa < 1:1476/150‑8 (MQ=255) aGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACgtg < 1:643141/150‑1 (MQ=255) aGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACgtg > 1:1642021/1‑150 (MQ=255) aGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCCG‑ACGCAGTGCGTTCAGGAACgga < 2:1368782/150‑3 (MQ=255) tGAATGTGTACTATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCTTATAAGGAAAAGAGAGAATGGCGAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTcc < 2:245964/150‑1 (MQ=255) tGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCCG‑ACGCAGTGCGTTCAGGAACggatctt < 2:1311425/150‑7 (MQ=255) gAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCa > 2:124139/1‑150 (MQ=255) gAATGTGTACAATTGAAACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCa > 2:1340923/1‑150 (MQ=255) tgtACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGACAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTc < 1:1076324/150‑1 (MQ=255) tgtACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGAATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGAGTTCCAGttta > 1:702786/1‑149 (MQ=255) gtACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCt > 1:1011652/1‑150 (MQ=255) gtACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCt < 1:915054/150‑1 (MQ=255) cAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCtatt < 1:1378294/150‑1 (MQ=255) cAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCtatt < 2:1307441/150‑1 (MQ=255) ttGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCtatttat > 1:1599083/1‑150 (MQ=255) tGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCtatttatt < 2:1195253/150‑1 (MQ=255) gataggTATAGTGCGCAATTTTTTCAGAATCGAAAGGATCAAAGTACAAATAAGCATTTAAGGAAAAGTGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGGACTGCG‑TCGGGAACGTGTTCCAGTTTCTatttattt < 1:465415/145‑1 (MQ=255) agaCGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTg < 1:1400614/150‑1 (MQ=255) gaCGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTgg < 2:229255/150‑1 (MQ=255) cGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTg > 2:1646689/1‑150 (MQ=255) cGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATgg > 1:699034/1‑150 (MQ=255) gTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGt > 2:745864/1‑150 (MQ=255) gTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGt > 1:1066846/1‑150 (MQ=255) gcgcAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTAt > 2:853474/1‑150 (MQ=255) aTTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGc < 2:1599083/150‑1 (MQ=255) ttttCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGc < 2:643344/150‑1 (MQ=255) tCAGAATCGATAGGTTAAAAGTACAAATAAGCATATAAGGAATAGTGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGATCGCACTGCG‑TAGGGAACGTGTTCCAGTTTCTATTTATTTGGTTAATGGTATTAAGCTGCAAg < 1:728709/150‑1 (MQ=255) tCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTg > 1:872972/1‑131 (MQ=255) tCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTACTGAACGCACTGCG‑TCGTGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAg < 1:101620/150‑1 (MQ=255) cAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAgg > 2:1443265/1‑150 (MQ=255) aGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAggg > 2:1128580/1‑150 (MQ=255) aGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAggg < 1:1025990/150‑1 (MQ=255) aaTCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCa < 2:1462802/150‑1 (MQ=255) aaTCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCa < 2:1185691/150‑1 (MQ=255) aaTCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCa < 1:1585033/150‑1 (MQ=255) aTCGAAAGGTTCAAAGTACAAATAAGAATATAAGGAAAAGAGAGAATGGCTAAGGGGCAAACTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGATCCAGTTTCTATGTATTTGGTGAATGGTATTAAGCTGCAAGGGCaa > 1:1186240/1‑150 (MQ=255) gTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGTCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTc < 1:373900/150‑1 (MQ=255) ttCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCt > 2:1537338/1‑150 (MQ=255) aaaGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCtttt > 1:841799/1‑150 (MQ=255) aaGTACAAATAAGCATATAATGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTg < 1:695325/150‑1 (MQ=255) aaGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTg < 2:1646190/150‑1 (MQ=255) aGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGa > 1:629712/1‑150 (MQ=255) aGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGa > 1:1170776/1‑150 (MQ=255) aGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGa > 2:789948/1‑150 (MQ=255) aGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGa > 2:1590061/1‑150 (MQ=255) cAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAg > 1:860098/1‑150 (MQ=255) aaaTAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGt > 1:296968/1‑150 (MQ=255) aaTAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGtt < 1:856869/150‑1 (MQ=255) cATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGAt < 1:124139/150‑1 (MQ=255) tcaGGAAAAGCGAGAATGGCTAAGGGCCAAACTATACAAGATCCTGTCCCGACCGCACGGCG‑TCGGGAACGGGTTCCAGTGTCTATTTATTTGGCGAATGGTATTAAGCAGCAAGGGCAAATCGCGTCTTTTGATCAGTTCGTGATCCTg < 2:296205/148‑1 (MQ=255) taAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTg > 2:925593/1‑150 (MQ=255) aGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGtt < 2:1271475/150‑1 (MQ=255) ggAAAAGAGTGAATGGCTAAGGGGCAATCTTTACTAGATCCGGTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTg < 2:1139230/150‑1 (MQ=255) ggAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTg > 1:1577725/1‑150 (MQ=255) ggAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTg > 2:1616007/1‑150 (MQ=255) ggAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTg < 1:438199/150‑1 (MQ=255) aaaaGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGACCGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGaa > 1:1221258/1‑150 (MQ=255) gagagaATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAac < 1:1507704/150‑1 (MQ=255) gagagaATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAAGGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTTAAAAac > 1:995368/1‑150 (MQ=255) agagaATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAaca > 1:547936/1‑150 (MQ=255) agagaATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAaca < 2:122813/150‑1 (MQ=255) gagaATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAacac < 1:1646689/150‑1 (MQ=255) gaATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACgg > 1:371760/1‑150 (MQ=255) aTGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTc < 1:1442175/150‑1 (MQ=255) gCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGAGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGc > 1:1190418/1‑150 (MQ=255) cTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGcc < 2:1245570/150‑1 (MQ=255) cTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGcc < 2:699034/150‑1 (MQ=255) cTAAGGGGCAATCTTTACAAGATCCGGTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGcc < 2:1370344/150‑1 (MQ=255) tAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCa > 2:890285/1‑150 (MQ=255) aGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTATTGAAAAACACGGTCAGCCAGa < 2:296968/150‑1 (MQ=255) ggggCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTGCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGCAAAACCCGGTCGGCCAGAt > 1:717203/1‑150 (MQ=255) gggCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATg < 1:853474/150‑1 (MQ=255) ggCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATgg < 2:1205414/150‑1 (MQ=255) ggCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATgg > 2:530680/1‑150 (MQ=255) gCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGATTGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGt > 1:822253/1‑150 (MQ=255) gCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGt < 2:547936/150‑1 (MQ=255) aaTCTTTACAAGATCCGTTCCTGAACGCACTGCG‑GCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGttt < 2:107418/150‑1 (MQ=255) cTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACa < 1:1317101/150‑1 (MQ=255) ttACAAGATCCGTTCCTGCACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATATGGTGAATGCTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAg > 1:256782/1‑150 (MQ=255) ttACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAg < 2:1011652/150‑1 (MQ=255) ttACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAg > 1:341843/1‑150 (MQ=255) tACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGc < 1:213499/150‑1 (MQ=255) aCAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCa < 2:152149/150‑1 (MQ=255) tggaacacGTTCCCG‑ACGCAGTGCGTTCAGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCAc > 1:1634672/8‑150 (MQ=255) cAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCAc < 1:1128580/150‑1 (MQ=255) aGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCAcgc > 2:489040/1‑150 (MQ=255) gATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCACTTCGGGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCAcgcg < 2:841799/150‑1 (MQ=255) acGTTCCCG‑ACGCAGTGCGTTCAGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTAGATCAGTTCGTGATCCTGTTGAAAAACAAGGTCAGCCAGATGGTTTACAAGCACGCGAtt > 2:131826/2‑150 (MQ=255) cGTTCCCG‑ACGCAGTGCGTTCAGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGAttt > 1:1242680/1‑150 (MQ=255) gTTCCTGAATGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTc > 2:1164043/1‑150 (MQ=255) gTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTc > 2:223198/1‑150 (MQ=255) ccTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTCTAc > 1:673450/1‑150 (MQ=255) ccTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTCTAc < 1:1537338/150‑1 (MQ=255) ccTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTCTAc < 2:1066846/150‑1 (MQ=255) gAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTCTACtgt < 1:1202288/150‑1 (MQ=255) | ACAGGTTGTTGGTGCTATCGCAGGCTGAATGTGTACAATTGAGACGTATCGTGCGCAATTTTTTCAGAATCGAAAGGTTCAAAGTACAAATAAGCATATAAGGAAAAGAGAGAATGGCTAAGGGGCAATCTTTACAAGATCCGTTCCTGAACGCACTGCG‑TCGGGAACGTGTTCCAGTTTCTATTTATTTGGTGAATGGTATTAAGCTGCAAGGGCAAATCGAGTCTTTTGATCAGTTCGTGATCCTGTTGAAAAACACGGTCAGCCAGATGGTTTACAAGCACGCGATTTCTACTGT > NC_000913/4400175‑4400472 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |