| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 896031 = | 75 (0.760) | 6 (0.060) | 5/266 | NT | 7.8% | coding (1041/1134 nt) | potG | putrescine ABC transporter ATPase |
| ? | NC_000913 | 896085 = | 70 (0.740) | coding (1095/1134 nt) | potG | putrescine ABC transporter ATPase | |||||
AATCCGCCCGGCGGTTTCGACTGGGCAGCAGGTTCAAGTGTACTCATCTTTGCTCCTTAAACCGTCAGCACCACACAGCTGTCCACTTCCCAGCACAAACGCACTTCGTCGCCCCAGGTCGGTAACCCTTTACGATGACGATGGGCG‑TTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/896180‑896031‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcg‑tttGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGCGCAAACTGGTCAT > NC_000913/896085‑896231 AATCCGCCCGGCGGTTTCGACTGGGCAGCAGGTTCAAGTGTACTCAGCTTTGCTCCTTAAACCGTCAGCACCACACAGCTGGCCACTTCCCAGCACAACCGCACTTCGTCGCCCCAGGGCGGTAACCCTTTACGATGACGATGGGCG‑TTT < 2:1238964/150‑1 CCAGCACAAACGCACTTCGTCGCCCCAGGTCGGTAACCCTTTACGATGACGATGGGCG‑TTTGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGG > 2:1156057/1‑150 CAGCACAAACGCACTTCGTCGCCCCAGGTCGGTAACCCTTTACGATGACGATGGGCGTTTTGTAGCTGGGAAGTGGACAGCTGTGTGGCGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCG > 2:300887/1‑150 ACAAACGCACTTCGTCGCCCCAGGTCGGTAACCCTTTACGATGACGATGGGCG‑TTTGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGA > 1:745215/1‑150 CGCACTTCGTCGCCCCAGGTCGGTAACCCTTTACGATGACGATGGGCG‑TTTGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAA > 2:108805/1‑150 cGACGATGGGCG‑TTTGT‑GCTGGGAAGTGGACAGCTGTGCGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGtg < 1:862826/149‑3 TGACGATGGGCG‑TTTGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGCG < 1:1156057/150‑1 GGCG‑TTTGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGCGCAAACTGG < 2:691921/150‑1 GCG‑TTTGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGCGCAAACTGGT < 1:1138402/150‑1 G‑TTTGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGCGAAAACTGGTCA > 1:1585785/1‑150 TTTGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGCGCAAACTGGTCAT > 1:632863/1‑150 AATCCGCCCGGCGGTTTCGACTGGGCAGCAGGTTCAAGTGTACTCATCTTTGCTCCTTAAACCGTCAGCACCACACAGCTGTCCACTTCCCAGCACAAACGCACTTCGTCGCCCCAGGTCGGTAACCCTTTACGATGACGATGGGCG‑TTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/896180‑896031‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcg‑tttGT‑GCTGGGAAGTGGACAGCTGTGTGGTGCTGACGGTTTAAGGAGCAAAGATGAGTACACTTGAACCTGCTGCCCAGTCGAAACCGCCGGGCGGATTTAAGCTGTGGTTGTCGCAGCTGCAAATGAAGCATGGGCGCAAACTGGTCAT > NC_000913/896085‑896231 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |